RNA–Protein interactions for RNA: ENST00000402271.5

HDAC11-203, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-203ENST00000402271 TWIST1Q15672 202 aa12.46□□□□□ -0.41
HDAC11-203ENST00000402271 OCC1Q8TAD7 63 aa12.46□□□□□ -0.41
HDAC11-203ENST00000402271 GFRA4Q9GZZ7 299 aa12.46□□□□□ -0.41
HDAC11-203ENST00000402271 RNASE7Q9H1E1 156 aaKnown RBP12.46□□□□□ -0.41
HDAC11-203ENST00000402271 LRP1Q07954 4544 aaKnown RBP12.46□□□□□ -0.42
HDAC11-203ENST00000402271 CNBPP62633 177 aaKnown RBP12.45□□□□□ -0.42
HDAC11-203ENST00000402271 COTL1Q14019 142 aa12.45□□□□□ -0.42
HDAC11-203ENST00000402271 SDIM1Q6ZPB5 146 aa12.45□□□□□ -0.42
HDAC11-203ENST00000402271 UBE2L6O14933 153 aa12.44□□□□□ -0.42
HDAC11-203ENST00000402271 AMTP48728 403 aa12.44□□□□□ -0.42
HDAC11-203ENST00000402271 GATD1Q8NB37 220 aa12.44□□□□□ -0.42
HDAC11-203ENST00000402271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.44□□□□□ -0.42
HDAC11-203ENST00000402271 OXTP01178 125 aa12.43□□□□□ -0.42
HDAC11-203ENST00000402271 GTSF1Q8WW33 167 aa12.43□□□□□ -0.42
HDAC11-203ENST00000402271 FAT3Q8TDW7 4589 aa12.43□□□□□ -0.42
HDAC11-203ENST00000402271 hDV102S1A0JD36 115 aa12.42□□□□□ -0.42
HDAC11-203ENST00000402271 RPL37AP61513 92 aaKnown RBP12.42□□□□□ -0.42
HDAC11-203ENST00000402271 PKHD1L1Q86WI1 4243 aa12.42□□□□□ -0.42
HDAC11-203ENST00000402271 TRAV26-2A0A0B4J265 109 aa12.41□□□□□ -0.42
HDAC11-203ENST00000402271 TMEM250H0YL14 139 aa12.41□□□□□ -0.42
HDAC11-203ENST00000402271 PANO1I0J062 215 aa12.41□□□□□ -0.42
HDAC11-203ENST00000402271 Q6ZNX1 250 aa12.41□□□□□ -0.42
HDAC11-203ENST00000402271 CIRBPQ14011 172 aaKnown RBP12.4□□□□□ -0.42
HDAC11-203ENST00000402271 NCR2O95944 276 aa12.39□□□□□ -0.43
HDAC11-203ENST00000402271 SLPIP03973 132 aa12.39□□□□□ -0.43
HDAC11-203ENST00000402271 BLOC1S1P78537 153 aa12.39□□□□□ -0.43
HDAC11-203ENST00000402271 FAM231DQ6ZW35 169 aa12.39□□□□□ -0.43
HDAC11-203ENST00000402271 SMIM15Q7Z3B0 74 aa12.39□□□□□ -0.43
HDAC11-203ENST00000402271 LYPD6BQ8NI32 183 aa12.39□□□□□ -0.43
HDAC11-203ENST00000402271 AP5S1Q9NUS5 200 aa12.39□□□□□ -0.43
HDAC11-203ENST00000402271 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.38□□□□□ -0.43
HDAC11-203ENST00000402271 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
HDAC11-203ENST00000402271 TEX261Q6UWH6 196 aa12.38□□□□□ -0.43
HDAC11-203ENST00000402271 RPL39LQ96EH5 51 aaKnown RBP12.38□□□□□ -0.43
HDAC11-203ENST00000402271 IGHV3-64A0A075B6Q5 118 aa12.37□□□□□ -0.43
HDAC11-203ENST00000402271 H7C423 109 aa12.37□□□□□ -0.43
HDAC11-203ENST00000402271 FOXA3P55318 350 aaPredicted RBP12.37□□□□□ -0.43
HDAC11-203ENST00000402271 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
HDAC11-203ENST00000402271 A8MWL6 223 aa12.36□□□□□ -0.43
HDAC11-203ENST00000402271 CT83Q5H943 113 aa12.36□□□□□ -0.43
HDAC11-203ENST00000402271 AKAP14Q86UN6 197 aa12.36□□□□□ -0.43
HDAC11-203ENST00000402271 C15orf56Q8N910 161 aa12.36□□□□□ -0.43
HDAC11-203ENST00000402271 GAGE12HA6NDE8 117 aa12.35□□□□□ -0.43
HDAC11-203ENST00000402271 SDHAF1A6NFY7 115 aa12.35□□□□□ -0.43
HDAC11-203ENST00000402271 APCSP02743 223 aa12.35□□□□□ -0.43
HDAC11-203ENST00000402271 HNRNPA3P51991 378 aaKnown RBP12.35□□□□□ -0.43
HDAC11-203ENST00000402271 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
HDAC11-203ENST00000402271 TRBV6-5A0A0K0K1A5 114 aa12.34□□□□□ -0.43
HDAC11-203ENST00000402271 SERTAD4-AS1Q5TG53 156 aa12.34□□□□□ -0.43
HDAC11-203ENST00000402271 AMMECR1LQ6DCA0 310 aa12.34□□□□□ -0.43
HDAC11-203ENST00000402271 CFAP161Q6P656 301 aa12.34□□□□□ -0.43
HDAC11-203ENST00000402271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.33□□□□□ -0.44
HDAC11-203ENST00000402271 IGKV2-29A2NJV5 120 aaPredicted RBP12.33□□□□□ -0.44
HDAC11-203ENST00000402271 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
HDAC11-203ENST00000402271 IGKV3OR2-268A0A0C4DH90 116 aa12.32□□□□□ -0.44
HDAC11-203ENST00000402271 I3L3M4 83 aa12.32□□□□□ -0.44
HDAC11-203ENST00000402271 FGF6P10767 208 aa12.32□□□□□ -0.44
HDAC11-203ENST00000402271 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
HDAC11-203ENST00000402271 SPACA4Q8TDM5 124 aa12.32□□□□□ -0.44
HDAC11-203ENST00000402271 CHCHD10Q8WYQ3 142 aaPredicted RBP12.32□□□□□ -0.44
HDAC11-203ENST00000402271 FAM231BA6NCW3 169 aa12.31□□□□□ -0.44
HDAC11-203ENST00000402271 ZNF25P17030 456 aaPredicted RBP12.31□□□□□ -0.44
HDAC11-203ENST00000402271 FAM210AQ96ND0 272 aa12.31□□□□□ -0.44
HDAC11-203ENST00000402271 A0A087WYN8 130 aa12.3□□□□□ -0.44
HDAC11-203ENST00000402271 CHTF8P0CG12 524 aa12.3□□□□□ -0.44
HDAC11-203ENST00000402271 PMCHP20382 165 aa12.3□□□□□ -0.44
HDAC11-203ENST00000402271 CEBPGP53567 150 aa12.3□□□□□ -0.44
HDAC11-203ENST00000402271 LINC01551Q86U37 167 aa12.3□□□□□ -0.44
HDAC11-203ENST00000402271 BORCS7Q96B45 105 aa12.3□□□□□ -0.44
HDAC11-203ENST00000402271 SMIM7Q9BQ49 75 aa12.3□□□□□ -0.44
HDAC11-203ENST00000402271 ESDP10768 282 aa12.29□□□□□ -0.44
HDAC11-203ENST00000402271 RPS10P46783 165 aaKnown RBP12.29□□□□□ -0.44
HDAC11-203ENST00000402271 OR5A1Q8NGJ0 315 aa12.29□□□□□ -0.44
HDAC11-203ENST00000402271 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
HDAC11-203ENST00000402271 TMEM191AQ9H0A3 160 aa12.29□□□□□ -0.44
HDAC11-203ENST00000402271 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
HDAC11-203ENST00000402271 A0A1B0GUT8 65 aa12.28□□□□□ -0.44
HDAC11-203ENST00000402271 HIGD1CA8MV81 97 aa12.28□□□□□ -0.44
HDAC11-203ENST00000402271 GAS8-AS1O95177 125 aa12.28□□□□□ -0.44
HDAC11-203ENST00000402271 DPH3Q96FX2 82 aa12.28□□□□□ -0.44
HDAC11-203ENST00000402271 EIF5A2Q9GZV4 153 aaKnown RBP12.28□□□□□ -0.44
HDAC11-203ENST00000402271 ST20Q9HBF5 79 aa12.28□□□□□ -0.44
HDAC11-203ENST00000402271 PLAC8Q9NZF1 115 aa12.28□□□□□ -0.44
HDAC11-203ENST00000402271 HMCN2Q8NDA2 5059 aa12.28□□□□□ -0.44
HDAC11-203ENST00000402271 hCG_2014768A0A024R1R8 64 aa12.27□□□□□ -0.45
HDAC11-203ENST00000402271 TSHBP01222 138 aa12.27□□□□□ -0.45
HDAC11-203ENST00000402271 FOXI1Q12951 378 aa12.27□□□□□ -0.45
HDAC11-203ENST00000402271 HIGD2BQ4VC39 106 aa12.27□□□□□ -0.45
HDAC11-203ENST00000402271 BTF3L4Q96K17 158 aa12.27□□□□□ -0.45
HDAC11-203ENST00000402271 OSTCQ9NRP0 149 aa12.27□□□□□ -0.45
HDAC11-203ENST00000402271 POLR2KP53803 58 aaKnown RBP12.26□□□□□ -0.45
HDAC11-203ENST00000402271 COX6A2Q02221 97 aa12.26□□□□□ -0.45
HDAC11-203ENST00000402271 TMEM101Q96IK0 257 aa12.26□□□□□ -0.45
HDAC11-203ENST00000402271 ZNF727A8MUV8 499 aa12.25□□□□□ -0.45
HDAC11-203ENST00000402271 RAB4AP20338 218 aa12.25□□□□□ -0.45
HDAC11-203ENST00000402271 Q6ZRU5 148 aa12.25□□□□□ -0.45
HDAC11-203ENST00000402271 MRAP2Q96G30 205 aa12.25□□□□□ -0.45
HDAC11-203ENST00000402271 TMEM242Q9NWH2 141 aa12.25□□□□□ -0.45
HDAC11-203ENST00000402271 TRBV27A0A0K0K1C4 114 aa12.24□□□□□ -0.45
HDAC11-203ENST00000402271 LINC00959A0A1B0GUT2 108 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms