RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 FAM231AP0DMU4 169 aa10.54□□□□□ -0.72
RERE-204ENST00000400908 FAM231CP0DMU5 169 aa10.54□□□□□ -0.72
RERE-204ENST00000400908 KRTAP27-1Q3LI81 207 aa10.54□□□□□ -0.72
RERE-204ENST00000400908 K7EMT4 169 aa10.54□□□□□ -0.72
RERE-204ENST00000400908 CCDC179H3BU77 68 aa10.53□□□□□ -0.72
RERE-204ENST00000400908 IGF2-ASQ6U949 168 aa10.53□□□□□ -0.72
RERE-204ENST00000400908 Q6ZVQ6 151 aa10.53□□□□□ -0.72
RERE-204ENST00000400908 PCNX1Q96RV3 2341 aa10.53□□□□□ -0.72
RERE-204ENST00000400908 UBE2D4Q9Y2X8 147 aa10.53□□□□□ -0.72
RERE-204ENST00000400908 MUC22E2RYF6 1773 aaPredicted RBP10.53□□□□□ -0.72
RERE-204ENST00000400908 J3QKU1 62 aa10.53□□□□□ -0.72
RERE-204ENST00000400908 SMAD5-AS1Q9Y6J3 95 aa10.53□□□□□ -0.72
RERE-204ENST00000400908 TRBV30A0A0K0K1B3 111 aa10.52□□□□□ -0.72
RERE-204ENST00000400908 MRPS12O15235 138 aaKnown RBP10.52□□□□□ -0.72
RERE-204ENST00000400908 CHCHD10Q8WYQ3 142 aaPredicted RBP10.52□□□□□ -0.72
RERE-204ENST00000400908 IBA57-AS1B1ANH7 110 aa10.52□□□□□ -0.72
RERE-204ENST00000400908 MIFP14174 115 aa10.52□□□□□ -0.72
RERE-204ENST00000400908 ZNF706Q9Y5V0 76 aaPredicted RBP10.52□□□□□ -0.72
RERE-204ENST00000400908 TMEM223A0PJW6 202 aa10.52□□□□□ -0.73
RERE-204ENST00000400908 TRIAP1O43715 76 aa10.52□□□□□ -0.73
RERE-204ENST00000400908 FAM19A5Q7Z5A7 132 aaPredicted RBP10.52□□□□□ -0.73
RERE-204ENST00000400908 FAM30AQ9NZY2 134 aa10.52□□□□□ -0.73
RERE-204ENST00000400908 CACNA1BQ00975 2339 aa10.52□□□□□ -0.73
RERE-204ENST00000400908 UBE2D1P51668 147 aa10.52□□□□□ -0.73
RERE-204ENST00000400908 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
RERE-204ENST00000400908 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.73
RERE-204ENST00000400908 UBE2D2P62837 147 aa10.51□□□□□ -0.73
RERE-204ENST00000400908 PCDH15Q96QU1 1955 aa10.51□□□□□ -0.73
RERE-204ENST00000400908 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
RERE-204ENST00000400908 C11orf53Q8IXP5 236 aa10.51□□□□□ -0.73
RERE-204ENST00000400908 USF3Q68DE3 2245 aa10.51□□□□□ -0.73
RERE-204ENST00000400908 MYCNOSP40205 109 aa10.51□□□□□ -0.73
RERE-204ENST00000400908 C7orf33Q8WU49 177 aa10.51□□□□□ -0.73
RERE-204ENST00000400908 Q6ZSR3 168 aa10.5□□□□□ -0.73
RERE-204ENST00000400908 C6orf99Q4VX62 202 aa10.5□□□□□ -0.73
RERE-204ENST00000400908 CTSZQ9UBR2 303 aa10.5□□□□□ -0.73
RERE-204ENST00000400908 Q6Q795 121 aa10.5□□□□□ -0.73
RERE-204ENST00000400908 SMIM9A6NGZ8 99 aa10.5□□□□□ -0.73
RERE-204ENST00000400908 EBI3Q14213 229 aa10.5□□□□□ -0.73
RERE-204ENST00000400908 FAM167A-AS1Q96KT0 104 aa10.49□□□□□ -0.73
RERE-204ENST00000400908 PTPRSQ13332 1948 aa10.49□□□□□ -0.73
RERE-204ENST00000400908 NOTCH3Q9UM47 2321 aa10.49□□□□□ -0.73
RERE-204ENST00000400908 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
RERE-204ENST00000400908 H7C423 109 aa10.49□□□□□ -0.73
RERE-204ENST00000400908 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
RERE-204ENST00000400908 CHD3Q12873 2000 aaKnown RBP10.49□□□□□ -0.73
RERE-204ENST00000400908 PRYO14603 147 aa10.48□□□□□ -0.73
RERE-204ENST00000400908 CRYGDP07320 174 aa10.48□□□□□ -0.73
RERE-204ENST00000400908 GTF3C1Q12789 2109 aa10.48□□□□□ -0.73
RERE-204ENST00000400908 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
RERE-204ENST00000400908 C11orf45Q8TAV5 145 aa10.48□□□□□ -0.73
RERE-204ENST00000400908 TNRC6BQ9UPQ9 1833 aaKnown RBP10.47□□□□□ -0.73
RERE-204ENST00000400908 GRNP28799 593 aaKnown RBP10.47□□□□□ -0.73
RERE-204ENST00000400908 UBE2D3P61077 147 aa10.47□□□□□ -0.73
RERE-204ENST00000400908 DCANP1Q8TF63 244 aa10.47□□□□□ -0.73
RERE-204ENST00000400908 ZGRF1Q86YA3 2104 aa10.47□□□□□ -0.73
RERE-204ENST00000400908 VPREB1P12018 145 aa10.47□□□□□ -0.73
RERE-204ENST00000400908 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
RERE-204ENST00000400908 CDKN2A-AS1Q9UH64 79 aa10.47□□□□□ -0.73
RERE-204ENST00000400908 C4orf3Q8WVX3 66 aa10.46□□□□□ -0.73
RERE-204ENST00000400908 XAGE1AQ9HD64 81 aa10.46□□□□□ -0.73
RERE-204ENST00000400908 SPTAN1Q13813 2472 aaKnown RBP10.46□□□□□ -0.73
RERE-204ENST00000400908 TRBV7-6A0A0J9YX20 115 aa10.46□□□□□ -0.73
RERE-204ENST00000400908 A0A0J9YX75 114 aa10.46□□□□□ -0.73
RERE-204ENST00000400908 C5orf56Q8N8D9 126 aa10.46□□□□□ -0.73
RERE-204ENST00000400908 SERTAD4-AS1Q5TG53 156 aa10.46□□□□□ -0.74
RERE-204ENST00000400908 NEXN-AS1Q8NBZ9 246 aa10.46□□□□□ -0.74
RERE-204ENST00000400908 Q6ZQY7 126 aa10.45□□□□□ -0.74
RERE-204ENST00000400908 TMEM89A2RUT3 159 aa10.45□□□□□ -0.74
RERE-204ENST00000400908 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.45□□□□□ -0.74
RERE-204ENST00000400908 ZNF22P17026 224 aaPredicted RBP10.45□□□□□ -0.74
RERE-204ENST00000400908 C19orf71A6NCJ1 209 aa10.45□□□□□ -0.74
RERE-204ENST00000400908 WISP2O76076 250 aa10.45□□□□□ -0.74
RERE-204ENST00000400908 Q6JHZ5 121 aa10.45□□□□□ -0.74
RERE-204ENST00000400908 RITA1Q96K30 269 aa10.45□□□□□ -0.74
RERE-204ENST00000400908 LINC00467Q9BRT7 94 aa10.45□□□□□ -0.74
RERE-204ENST00000400908 TNRC6AQ8NDV7 1962 aaKnown RBP10.44□□□□□ -0.74
RERE-204ENST00000400908 LY6LH3BQJ8 138 aa10.44□□□□□ -0.74
RERE-204ENST00000400908 INSL3P51460 131 aa10.44□□□□□ -0.74
RERE-204ENST00000400908 DEFB1P60022 68 aa10.44□□□□□ -0.74
RERE-204ENST00000400908 DEFB113Q30KQ7 82 aa10.44□□□□□ -0.74
RERE-204ENST00000400908 SYCNQ0VAF6 134 aa10.43□□□□□ -0.74
RERE-204ENST00000400908 TRBV6-5A0A0K0K1A5 114 aa10.43□□□□□ -0.74
RERE-204ENST00000400908 WNK2Q9Y3S1 2297 aa10.43□□□□□ -0.74
RERE-204ENST00000400908 TRAV7A0A075B6U4 112 aa10.43□□□□□ -0.74
RERE-204ENST00000400908 FRMD6-AS1P0C7T7 363 aa10.43□□□□□ -0.74
RERE-204ENST00000400908 LINC00322Q6ZN03 302 aaPredicted RBP10.43□□□□□ -0.74
RERE-204ENST00000400908 C22orf34Q6ZV56 151 aa10.42□□□□□ -0.74
RERE-204ENST00000400908 IGKV2-28A0A075B6P5 120 aa10.42□□□□□ -0.74
RERE-204ENST00000400908 IGKV2D-28P01615 120 aa10.42□□□□□ -0.74
RERE-204ENST00000400908 MAP6D1Q9H9H5 199 aa10.42□□□□□ -0.74
RERE-204ENST00000400908 CELA1Q9UNI1 258 aa10.42□□□□□ -0.74
RERE-204ENST00000400908 MUC6Q6W4X9 2439 aa10.41□□□□□ -0.74
RERE-204ENST00000400908 Q6ZTI0 123 aa10.41□□□□□ -0.74
RERE-204ENST00000400908 LINC00208Q96KT6 92 aa10.41□□□□□ -0.74
RERE-204ENST00000400908 PLA2G2AP14555 144 aa10.41□□□□□ -0.74
RERE-204ENST00000400908 M0R378 163 aa10.41□□□□□ -0.74
RERE-204ENST00000400908 X6R8D5 127 aa10.41□□□□□ -0.74
RERE-204ENST00000400908 MED13Q9UHV7 2174 aa10.41□□□□□ -0.74
RERE-204ENST00000400908 IGLV4-3A0A075B6K6 122 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms