RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 H7C423 109 aa11.94□□□□□ -0.5
CTNS-203ENST00000399306 VCYO14598 125 aa11.94□□□□□ -0.5
CTNS-203ENST00000399306 RTL8CO15255 209 aa11.94□□□□□ -0.5
CTNS-203ENST00000399306 PMCHP20382 165 aa11.94□□□□□ -0.5
CTNS-203ENST00000399306 SUMO2P61956 95 aaKnown RBP11.94□□□□□ -0.5
CTNS-203ENST00000399306 ORMDL3Q8N138 153 aa11.94□□□□□ -0.5
CTNS-203ENST00000399306 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
CTNS-203ENST00000399306 TMEM243Q9BU79 118 aa11.94□□□□□ -0.5
CTNS-203ENST00000399306 TCAPO15273 167 aa11.93□□□□□ -0.5
CTNS-203ENST00000399306 SLC7A5P1Q8MH63 180 aa11.93□□□□□ -0.5
CTNS-203ENST00000399306 FAT2Q9NYQ8 4349 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 A0A1B0GUV1 79 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 D6R8Y8 96 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 IGHV3-30P01768 117 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 IGHV3-33P01772 117 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 IGHV3-30-3P0DP02 117 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 IGHV3-30-5P0DP03 117 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 AMTP48728 403 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 TMEM136Q6ZRR5 245 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 GNB1LQ9BYB4 327 aa11.92□□□□□ -0.5
CTNS-203ENST00000399306 TRAV8-3A0A0A6YYJ7 113 aa11.91□□□□□ -0.5
CTNS-203ENST00000399306 PRSS47A8MTI9 375 aa11.91□□□□□ -0.5
CTNS-203ENST00000399306 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
CTNS-203ENST00000399306 APCSP02743 223 aa11.91□□□□□ -0.5
CTNS-203ENST00000399306 MT-ND6P03923 174 aa11.91□□□□□ -0.5
CTNS-203ENST00000399306 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
CTNS-203ENST00000399306 TMEM262E9PQX1 116 aa11.9□□□□□ -0.5
CTNS-203ENST00000399306 Q6ZRN7 208 aaPredicted RBP11.9□□□□□ -0.5
CTNS-203ENST00000399306 PRELID3AQ96N28 172 aa11.9□□□□□ -0.5
CTNS-203ENST00000399306 TSHBP01222 138 aa11.89□□□□□ -0.51
CTNS-203ENST00000399306 ESDP10768 282 aa11.89□□□□□ -0.51
CTNS-203ENST00000399306 MPV17L2Q567V2 206 aa11.89□□□□□ -0.51
CTNS-203ENST00000399306 ATRAIDQ6UW56 229 aa11.89□□□□□ -0.51
CTNS-203ENST00000399306 UBE2L6O14933 153 aa11.88□□□□□ -0.51
CTNS-203ENST00000399306 Q0VG73 95 aa11.88□□□□□ -0.51
CTNS-203ENST00000399306 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
CTNS-203ENST00000399306 COX11Q9Y6N1 276 aa11.88□□□□□ -0.51
CTNS-203ENST00000399306 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
CTNS-203ENST00000399306 NPYP01303 97 aa11.87□□□□□ -0.51
CTNS-203ENST00000399306 RBX1P62877 108 aa11.87□□□□□ -0.51
CTNS-203ENST00000399306 GAGE6Q13070 117 aa11.87□□□□□ -0.51
CTNS-203ENST00000399306 RMI2Q96E14 147 aa11.87□□□□□ -0.51
CTNS-203ENST00000399306 ZNF25P17030 456 aaPredicted RBP11.86□□□□□ -0.51
CTNS-203ENST00000399306 FCER1GP30273 86 aa11.86□□□□□ -0.51
CTNS-203ENST00000399306 SMAGPQ0VAQ4 97 aa11.86□□□□□ -0.51
CTNS-203ENST00000399306 Q8N3U1 123 aa11.86□□□□□ -0.51
CTNS-203ENST00000399306 TM2D2Q9BX73 214 aa11.86□□□□□ -0.51
CTNS-203ENST00000399306 PRR34Q9NV39 138 aa11.86□□□□□ -0.51
CTNS-203ENST00000399306 KLK12Q9UKR0 248 aa11.86□□□□□ -0.51
CTNS-203ENST00000399306 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
CTNS-203ENST00000399306 K7EMI3 77 aa11.84□□□□□ -0.51
CTNS-203ENST00000399306 ANGP03950 147 aaKnown RBP11.84□□□□□ -0.51
CTNS-203ENST00000399306 MRPL52Q86TS9 123 aaKnown RBP11.84□□□□□ -0.51
CTNS-203ENST00000399306 YPEL4Q96NS1 127 aa11.84□□□□□ -0.51
CTNS-203ENST00000399306 SMCO4Q9NRQ5 59 aa11.84□□□□□ -0.51
CTNS-203ENST00000399306 HECTD4Q9Y4D8 3996 aa11.84□□□□□ -0.51
CTNS-203ENST00000399306 MIAQ16674 131 aa11.83□□□□□ -0.52
CTNS-203ENST00000399306 Q8N976 141 aa11.83□□□□□ -0.52
CTNS-203ENST00000399306 C20orf203Q8NBC4 194 aa11.83□□□□□ -0.52
CTNS-203ENST00000399306 TMEM18Q96B42 140 aa11.83□□□□□ -0.52
CTNS-203ENST00000399306 CRPP02741 224 aa11.82□□□□□ -0.52
CTNS-203ENST00000399306 AMMECR1LQ6DCA0 310 aa11.82□□□□□ -0.52
CTNS-203ENST00000399306 UBE2WQ96B02 151 aa11.82□□□□□ -0.52
CTNS-203ENST00000399306 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
CTNS-203ENST00000399306 TGIF2-C20orf24A0A0A6YYL0 155 aa11.81□□□□□ -0.52
CTNS-203ENST00000399306 FGF6P10767 208 aa11.81□□□□□ -0.52
CTNS-203ENST00000399306 TNP2Q05952 138 aa11.81□□□□□ -0.52
CTNS-203ENST00000399306 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
CTNS-203ENST00000399306 Q8N8P6 123 aa11.81□□□□□ -0.52
CTNS-203ENST00000399306 TIMM21Q9BVV7 248 aa11.81□□□□□ -0.52
CTNS-203ENST00000399306 MRPL18Q9H0U6 180 aaKnown RBP11.81□□□□□ -0.52
CTNS-203ENST00000399306 Q9HAA7 133 aa11.81□□□□□ -0.52
CTNS-203ENST00000399306 NXT2Q9NPJ8 142 aaKnown RBP11.81□□□□□ -0.52
CTNS-203ENST00000399306 IGLV4-60A0A075B6I1 120 aa11.8□□□□□ -0.52
CTNS-203ENST00000399306 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
CTNS-203ENST00000399306 TRAV8-4A0A0B4J246 113 aa11.8□□□□□ -0.52
CTNS-203ENST00000399306 A0A1B0GVY2 172 aa11.8□□□□□ -0.52
CTNS-203ENST00000399306 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
CTNS-203ENST00000399306 RAB5AP20339 215 aa11.8□□□□□ -0.52
CTNS-203ENST00000399306 DEFB104AQ8WTQ1 72 aa11.8□□□□□ -0.52
CTNS-203ENST00000399306 TMEM101Q96IK0 257 aa11.8□□□□□ -0.52
CTNS-203ENST00000399306 PKD1P98161 4303 aa11.79□□□□□ -0.52
CTNS-203ENST00000399306 PSCAO43653 123 aa11.79□□□□□ -0.52
CTNS-203ENST00000399306 LINC00269Q8N2A0 174 aa11.79□□□□□ -0.52
CTNS-203ENST00000399306 ALKBH7Q9BT30 221 aaPredicted RBP11.79□□□□□ -0.52
CTNS-203ENST00000399306 DNAH11Q96DT5 4516 aa11.79□□□□□ -0.52
CTNS-203ENST00000399306 EPPK1P58107 5090 aaKnown RBP11.78□□□□□ -0.52
CTNS-203ENST00000399306 EREGO14944 169 aa11.78□□□□□ -0.52
CTNS-203ENST00000399306 REG3AQ06141 175 aa11.78□□□□□ -0.52
CTNS-203ENST00000399306 FABP9Q0Z7S8 132 aa11.78□□□□□ -0.52
CTNS-203ENST00000399306 KIAA1644Q3SXP7 199 aa11.78□□□□□ -0.52
CTNS-203ENST00000399306 C1orf43Q9BWL3 253 aa11.78□□□□□ -0.52
CTNS-203ENST00000399306 TRAPPC1Q9Y5R8 145 aa11.78□□□□□ -0.52
CTNS-203ENST00000399306 G0S2P27469 103 aa11.77□□□□□ -0.53
CTNS-203ENST00000399306 ORMDL2Q53FV1 153 aa11.77□□□□□ -0.53
CTNS-203ENST00000399306 RNASEKQ6P5S7 137 aaKnown RBP11.77□□□□□ -0.53
CTNS-203ENST00000399306 OR5A1Q8NGJ0 315 aa11.77□□□□□ -0.53
CTNS-203ENST00000399306 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms