RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 AZU1P20160 251 aa12.81□□□□□ -0.36
HLA-DQB1-204ENST00000399084 COTL1Q14019 142 aa12.81□□□□□ -0.36
HLA-DQB1-204ENST00000399084 SCGB1D4Q6XE38 83 aa12.81□□□□□ -0.36
HLA-DQB1-204ENST00000399084 ZNRF2Q8NHG8 242 aa12.81□□□□□ -0.36
HLA-DQB1-204ENST00000399084 TIMM21Q9BVV7 248 aa12.81□□□□□ -0.36
HLA-DQB1-204ENST00000399084 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB1-204ENST00000399084 IGHV3-73A0A0B4J1V6 119 aa12.8□□□□□ -0.36
HLA-DQB1-204ENST00000399084 LEPROTO15243 131 aa12.8□□□□□ -0.36
HLA-DQB1-204ENST00000399084 SMAGPQ0VAQ4 97 aa12.8□□□□□ -0.36
HLA-DQB1-204ENST00000399084 PLEKHB2Q96CS7 222 aa12.8□□□□□ -0.36
HLA-DQB1-204ENST00000399084 C16orf74Q96GX8 76 aa12.8□□□□□ -0.36
HLA-DQB1-204ENST00000399084 SPANXB1Q9NS25 103 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB1-204ENST00000399084 TRAV4A0A0B4J268 109 aa12.79□□□□□ -0.36
HLA-DQB1-204ENST00000399084 K7EP34 96 aa12.79□□□□□ -0.36
HLA-DQB1-204ENST00000399084 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
HLA-DQB1-204ENST00000399084 PHLDA1Q8WV24 401 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB1-204ENST00000399084 CCDC168Q8NDH2 2452 aa12.79□□□□□ -0.36
HLA-DQB1-204ENST00000399084 TMEM223A0PJW6 202 aa12.79□□□□□ -0.36
HLA-DQB1-204ENST00000399084 MRPS36P82909 103 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB1-204ENST00000399084 C19orf73Q9NVV2 129 aa12.79□□□□□ -0.36
HLA-DQB1-204ENST00000399084 SONP18583 2426 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-204ENST00000399084 J3QQQ9 107 aa12.78□□□□□ -0.36
HLA-DQB1-204ENST00000399084 C12orf74Q32Q52 190 aa12.78□□□□□ -0.36
HLA-DQB1-204ENST00000399084 Q6ZSN1 163 aa12.78□□□□□ -0.36
HLA-DQB1-204ENST00000399084 CHCHD7Q9BUK0 85 aa12.78□□□□□ -0.36
HLA-DQB1-204ENST00000399084 NHP2Q9NX24 153 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-204ENST00000399084 PRM2P04554 102 aa12.77□□□□□ -0.36
HLA-DQB1-204ENST00000399084 LGALS3P17931 250 aaKnown RBP12.77□□□□□ -0.36
HLA-DQB1-204ENST00000399084 DAZ4Q86SG3 579 aaKnown RBP12.77□□□□□ -0.36
HLA-DQB1-204ENST00000399084 DAZ3Q9NR90 486 aaKnown RBP12.77□□□□□ -0.36
HLA-DQB1-204ENST00000399084 TRGV1A0A0A0MS02 117 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 INSL3P51460 131 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 RPL36AP83881 106 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 SRSF9Q13242 221 aaKnown RBP eCLIP12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 SLC25A29Q8N8R3 303 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 RPL36ALQ969Q0 106 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 RAB37Q96AX2 223 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 ITPR2Q14571 2701 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 A0A0J9YY99 117 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 LY6G6DO95868 133 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 ZNF22P17026 224 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 OVOL2Q9BRP0 275 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 UBE2D4Q9Y2X8 147 aa12.76□□□□□ -0.37
HLA-DQB1-204ENST00000399084 NACAE9PAV3 2078 aa12.75□□□□□ -0.37
HLA-DQB1-204ENST00000399084 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
HLA-DQB1-204ENST00000399084 TINCRA0A1B0GVN0 87 aa12.75□□□□□ -0.37
HLA-DQB1-204ENST00000399084 GAGE12BA1L429 117 aa12.75□□□□□ -0.37
HLA-DQB1-204ENST00000399084 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-204ENST00000399084 EMP1P54849 157 aa12.74□□□□□ -0.37
HLA-DQB1-204ENST00000399084 DEFB104AQ8WTQ1 72 aa12.74□□□□□ -0.37
HLA-DQB1-204ENST00000399084 OPRPNQ99935 248 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-204ENST00000399084 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-204ENST00000399084 SPCS1Q9Y6A9 102 aa12.74□□□□□ -0.37
HLA-DQB1-204ENST00000399084 K7EQD1 137 aa12.74□□□□□ -0.37
HLA-DQB1-204ENST00000399084 A0A0J9YXV3 536 aa12.73□□□□□ -0.37
HLA-DQB1-204ENST00000399084 IGLL5B9A064 214 aa12.73□□□□□ -0.37
HLA-DQB1-204ENST00000399084 FOSL1P15407 271 aa12.73□□□□□ -0.37
HLA-DQB1-204ENST00000399084 CSNK1G2-AS1Q8NCQ2 148 aa12.73□□□□□ -0.37
HLA-DQB1-204ENST00000399084 PF4P02776 101 aa12.72□□□□□ -0.37
HLA-DQB1-204ENST00000399084 RRN3P1Q2M238 152 aa12.72□□□□□ -0.37
HLA-DQB1-204ENST00000399084 FAM104AQ969W3 186 aa12.72□□□□□ -0.37
HLA-DQB1-204ENST00000399084 LINC00482Q8N8I6 264 aa12.71□□□□□ -0.37
HLA-DQB1-204ENST00000399084 UBE2D1P51668 147 aa12.71□□□□□ -0.38
HLA-DQB1-204ENST00000399084 TIRAPP58753 221 aa12.71□□□□□ -0.38
HLA-DQB1-204ENST00000399084 Q6ZTI0 123 aa12.71□□□□□ -0.38
HLA-DQB1-204ENST00000399084 ZNF479Q96JC4 524 aa12.71□□□□□ -0.38
HLA-DQB1-204ENST00000399084 GTSF1LQ9H1H1 148 aa12.71□□□□□ -0.38
HLA-DQB1-204ENST00000399084 TRBV6-4A0A1B0GX49 114 aa12.7□□□□□ -0.38
HLA-DQB1-204ENST00000399084 DGAT2L7PQ6IED9 249 aa12.7□□□□□ -0.38
HLA-DQB1-204ENST00000399084 H7C423 109 aa12.69□□□□□ -0.38
HLA-DQB1-204ENST00000399084 NOP10Q9NPE3 64 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-204ENST00000399084 IGHV1-58A0A0C4DH39 117 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 PLAC8L1A1L4L8 177 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 TSPEAR-AS2P59090 65 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 UBE2D3P61077 147 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 UBE2D2P62837 147 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 FAM19A3Q7Z5A8 133 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 Q9UF83 564 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 HIVEP2P31629 2446 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 K7ERJ3 54 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 SMR3AQ99954 134 aa12.68□□□□□ -0.38
HLA-DQB1-204ENST00000399084 ZNF469Q96JG9 3925 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-204ENST00000399084 IGLV5-45A0A087WSX0 123 aa12.67□□□□□ -0.38
HLA-DQB1-204ENST00000399084 SMIM9A6NGZ8 99 aa12.67□□□□□ -0.38
HLA-DQB1-204ENST00000399084 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
HLA-DQB1-204ENST00000399084 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
HLA-DQB1-204ENST00000399084 RPL35AP18077 110 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-204ENST00000399084 LYRM7Q5U5X0 104 aa12.67□□□□□ -0.38
HLA-DQB1-204ENST00000399084 GEMIN7Q9H840 131 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-204ENST00000399084 TRGV2A0A075B6R0 118 aa12.66□□□□□ -0.38
HLA-DQB1-204ENST00000399084 IGHV3-30-3P0DP02 117 aa12.66□□□□□ -0.38
HLA-DQB1-204ENST00000399084 C9orf66Q5T8R8 295 aa12.66□□□□□ -0.38
HLA-DQB1-204ENST00000399084 CBY1Q9Y3M2 126 aa12.66□□□□□ -0.38
HLA-DQB1-204ENST00000399084 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-204ENST00000399084 IGKV2-29A2NJV5 120 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-204ENST00000399084 K7ERU9 68 aa12.65□□□□□ -0.38
HLA-DQB1-204ENST00000399084 WNK1Q9H4A3 2382 aa12.65□□□□□ -0.38
HLA-DQB1-204ENST00000399084 ACANP16112 2415 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms