RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TRBV6-5A0A0K0K1A5 114 aa17.4■□□□□ 0.38
PABPN1-202ENST00000397276 TCL1BO95988 128 aa17.4■□□□□ 0.38
PABPN1-202ENST00000397276 TRPT1Q86TN4 253 aaKnown RBP17.4■□□□□ 0.38
PABPN1-202ENST00000397276 GEMIN7Q9H840 131 aaKnown RBP17.4■□□□□ 0.38
PABPN1-202ENST00000397276 PMVKQ15126 192 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 DEFB114Q30KQ6 69 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 NDUFA11Q86Y39 141 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 ESM1Q9NQ30 184 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 A0A0J9YY99 117 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 TMEM238LA0A1B0GVL6 79 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 A6NJY4 79 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 UBE2D3P61077 147 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 UBE2D2P62837 147 aa17.39■□□□□ 0.37
PABPN1-202ENST00000397276 CFC1BP0CG36 223 aa17.37■□□□□ 0.37
PABPN1-202ENST00000397276 CFC1P0CG37 223 aa17.37■□□□□ 0.37
PABPN1-202ENST00000397276 Q9UF83 564 aa17.37■□□□□ 0.37
PABPN1-202ENST00000397276 CRYBA4P53673 196 aa17.36■□□□□ 0.37
PABPN1-202ENST00000397276 TMEM170BQ5T4T1 132 aa17.36■□□□□ 0.37
PABPN1-202ENST00000397276 RAX2Q96IS3 184 aa17.36■□□□□ 0.37
PABPN1-202ENST00000397276 LINC01587Q99440 93 aa17.36■□□□□ 0.37
PABPN1-202ENST00000397276 NIPBLQ6KC79 2804 aaeCLIP17.36■□□□□ 0.37
PABPN1-202ENST00000397276 Q6ZUT4 128 aa17.36■□□□□ 0.37
PABPN1-202ENST00000397276 TMEM141Q96I45 108 aa17.35■□□□□ 0.37
PABPN1-202ENST00000397276 TIMM17AQ99595 171 aa17.35■□□□□ 0.37
PABPN1-202ENST00000397276 ATP6V0E2Q8NHE4 81 aa17.34■□□□□ 0.37
PABPN1-202ENST00000397276 ZNRF2Q8NHG8 242 aa17.34■□□□□ 0.37
PABPN1-202ENST00000397276 CD28P10747 220 aa17.34■□□□□ 0.37
PABPN1-202ENST00000397276 I3L3M4 83 aa17.34■□□□□ 0.37
PABPN1-202ENST00000397276 IGHV3OR16-12A0A075B7B8 117 aa17.33■□□□□ 0.36
PABPN1-202ENST00000397276 XCL2Q9UBD3 114 aa17.33■□□□□ 0.36
PABPN1-202ENST00000397276 MTORP42345 2549 aa17.33■□□□□ 0.36
PABPN1-202ENST00000397276 IGHV3-30P01768 117 aa17.32■□□□□ 0.36
PABPN1-202ENST00000397276 IGHV3-30-5P0DP03 117 aa17.32■□□□□ 0.36
PABPN1-202ENST00000397276 TEN1Q86WV5 123 aa17.31■□□□□ 0.36
PABPN1-202ENST00000397276 TMEM86BQ8N661 226 aa17.31■□□□□ 0.36
PABPN1-202ENST00000397276 Q6ZSN1 163 aa17.31■□□□□ 0.36
PABPN1-202ENST00000397276 SCGB1C2P0DMR2 95 aa17.3■□□□□ 0.36
PABPN1-202ENST00000397276 PPDPFLQ8WWR9 84 aa17.3■□□□□ 0.36
PABPN1-202ENST00000397276 ITPR2Q14571 2701 aa17.3■□□□□ 0.36
PABPN1-202ENST00000397276 A8MTW9 85 aa17.3■□□□□ 0.36
PABPN1-202ENST00000397276 M0R2P5 195 aa17.3■□□□□ 0.36
PABPN1-202ENST00000397276 NSUN5P1Q3KNT7 163 aa17.3■□□□□ 0.36
PABPN1-202ENST00000397276 C20orf203Q8NBC4 194 aa17.3■□□□□ 0.36
PABPN1-202ENST00000397276 YAE1D1Q9NRH1 226 aa17.3■□□□□ 0.36
PABPN1-202ENST00000397276 CCL24O00175 119 aa17.29■□□□□ 0.36
PABPN1-202ENST00000397276 ANKRD29Q8N6D5 301 aa17.29■□□□□ 0.36
PABPN1-202ENST00000397276 CITED2Q99967 270 aaPredicted RBP17.29■□□□□ 0.36
PABPN1-202ENST00000397276 NOTCH3Q9UM47 2321 aa17.29■□□□□ 0.36
PABPN1-202ENST00000397276 TRAV2A0A0B4J234 112 aa17.29■□□□□ 0.36
PABPN1-202ENST00000397276 H7C2G1 150 aa17.29■□□□□ 0.36
PABPN1-202ENST00000397276 EIF4EBP3O60516 100 aaPredicted RBP17.29■□□□□ 0.36
PABPN1-202ENST00000397276 RHOHQ15669 191 aa17.29■□□□□ 0.36
PABPN1-202ENST00000397276 IGHV3-64A0A075B6Q5 118 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 ZNF415Q09FC8 603 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 ODF3L2Q3SX64 289 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 PDZD2O15018 2839 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 CEMP1Q6PRD7 247 aaPredicted RBP17.28■□□□□ 0.36
PABPN1-202ENST00000397276 HERVK_113P61574 105 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 PAPPA-AS1Q5QFB9 102 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 SLC25A29Q8N8R3 303 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 AMELXQ99217 191 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 TNFRSF18Q9Y5U5 241 aa17.28■□□□□ 0.36
PABPN1-202ENST00000397276 C10orf126Q8N4M7 172 aa17.27■□□□□ 0.36
PABPN1-202ENST00000397276 A8MWV9 139 aa17.26■□□□□ 0.35
PABPN1-202ENST00000397276 RNF183Q96D59 192 aa17.26■□□□□ 0.35
PABPN1-202ENST00000397276 STHQ8IWL8 128 aa17.26■□□□□ 0.35
PABPN1-202ENST00000397276 INSP01308 110 aa17.25■□□□□ 0.35
PABPN1-202ENST00000397276 RNASE13Q5GAN3 156 aaKnown RBP17.25■□□□□ 0.35
PABPN1-202ENST00000397276 PRO1854Q9UHT4 67 aa17.25■□□□□ 0.35
PABPN1-202ENST00000397276 IGHV3-38A0A0C4DH36 116 aa17.24■□□□□ 0.35
PABPN1-202ENST00000397276 C11orf72Q8NBR9 251 aa17.24■□□□□ 0.35
PABPN1-202ENST00000397276 A4D1N5 150 aa17.24■□□□□ 0.35
PABPN1-202ENST00000397276 J3QQQ9 107 aa17.24■□□□□ 0.35
PABPN1-202ENST00000397276 VCX2Q9H322 139 aa17.24■□□□□ 0.35
PABPN1-202ENST00000397276 IGLV4-3A0A075B6K6 122 aa17.23■□□□□ 0.35
PABPN1-202ENST00000397276 A0A0J9YXV3 536 aa17.23■□□□□ 0.35
PABPN1-202ENST00000397276 KRTAP1-1Q07627 177 aa17.23■□□□□ 0.35
PABPN1-202ENST00000397276 TEX29Q8N6K0 151 aa17.23■□□□□ 0.35
PABPN1-202ENST00000397276 C9JAW5 83 aa17.22■□□□□ 0.35
PABPN1-202ENST00000397276 SBSPONQ8IVN8 264 aa17.22■□□□□ 0.35
PABPN1-202ENST00000397276 LINC01006Q8NI28 216 aa17.22■□□□□ 0.35
PABPN1-202ENST00000397276 NACAE9PAV3 2078 aa17.21■□□□□ 0.35
PABPN1-202ENST00000397276 JMJD1CQ15652 2540 aa17.21■□□□□ 0.35
PABPN1-202ENST00000397276 TRBV20-1A0A075B6N2 111 aa17.21■□□□□ 0.35
PABPN1-202ENST00000397276 HELZ2Q9BYK8 2649 aaKnown RBP17.21■□□□□ 0.34
PABPN1-202ENST00000397276 ANK3Q12955 4377 aaKnown RBP17.2■□□□□ 0.34
PABPN1-202ENST00000397276 LYRM7Q5U5X0 104 aa17.2■□□□□ 0.34
PABPN1-202ENST00000397276 LGALS3P17931 250 aaKnown RBP17.2■□□□□ 0.34
PABPN1-202ENST00000397276 SLC25A20O43772 301 aa17.19■□□□□ 0.34
PABPN1-202ENST00000397276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.18■□□□□ 0.34
PABPN1-202ENST00000397276 IGKV2-29A2NJV5 120 aaPredicted RBP17.18■□□□□ 0.34
PABPN1-202ENST00000397276 C1orf158Q8N1D5 194 aa17.18■□□□□ 0.34
PABPN1-202ENST00000397276 MUSTN1Q8IVN3 82 aa17.17■□□□□ 0.34
PABPN1-202ENST00000397276 WFDC10AQ9H1F0 79 aa17.17■□□□□ 0.34
PABPN1-202ENST00000397276 ADARB2-AS1A8MUL3 147 aa17.17■□□□□ 0.34
PABPN1-202ENST00000397276 IGHV3-33P01772 117 aa17.17■□□□□ 0.34
PABPN1-202ENST00000397276 ZNF22P17026 224 aaPredicted RBP17.17■□□□□ 0.34
PABPN1-202ENST00000397276 SPXQ9BT56 116 aa17.17■□□□□ 0.34
PABPN1-202ENST00000397276 FAM104AQ969W3 186 aa17.16■□□□□ 0.34
PABPN1-202ENST00000397276 ERG28Q9UKR5 140 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms