RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CNFNQ9BYD5 112 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 TP73-AS1Q9UF72 201 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 P0DMU3 169 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 FAM231AP0DMU4 169 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 FAM231CP0DMU5 169 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 C9orf85Q96MD7 179 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 LINC00467Q9BRT7 94 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 CACNA1HO95180 2353 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 LINC00643Q86TS7 51 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 NDUFS5O43920 106 aa11.66□□□□□ -0.54
GNE-202ENST00000396594 PLA2G2AP14555 144 aa11.66□□□□□ -0.54
GNE-202ENST00000396594 ASPHD1Q5U4P2 390 aa11.66□□□□□ -0.54
GNE-202ENST00000396594 LY6G6DO95868 133 aa11.66□□□□□ -0.54
GNE-202ENST00000396594 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
GNE-202ENST00000396594 DOCK10Q96BY6 2186 aa11.66□□□□□ -0.54
GNE-202ENST00000396594 DEFB105AQ8NG35 78 aa11.66□□□□□ -0.54
GNE-202ENST00000396594 LINC01006Q8NI28 216 aa11.65□□□□□ -0.54
GNE-202ENST00000396594 IGLV4-3A0A075B6K6 122 aa11.65□□□□□ -0.54
GNE-202ENST00000396594 LECT2O14960 151 aa11.65□□□□□ -0.54
GNE-202ENST00000396594 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
GNE-202ENST00000396594 NCR3O14931 201 aa11.64□□□□□ -0.55
GNE-202ENST00000396594 FXYD2P54710 66 aa11.64□□□□□ -0.55
GNE-202ENST00000396594 C20orf173Q96LM9 149 aa11.64□□□□□ -0.55
GNE-202ENST00000396594 DHRS4-AS1Q9P1J3 65 aa11.64□□□□□ -0.55
GNE-202ENST00000396594 GVINP1Q7Z2Y8 2422 aa11.64□□□□□ -0.55
GNE-202ENST00000396594 C7orf33Q8WU49 177 aa11.64□□□□□ -0.55
GNE-202ENST00000396594 AKAP6Q13023 2319 aa11.64□□□□□ -0.55
GNE-202ENST00000396594 SPTBN1Q01082 2364 aaKnown RBP11.63□□□□□ -0.55
GNE-202ENST00000396594 LINC00173Q6ZV60 143 aa11.63□□□□□ -0.55
GNE-202ENST00000396594 INAFM1C9JVW0 142 aa11.63□□□□□ -0.55
GNE-202ENST00000396594 SS18L2Q9UHA2 77 aa11.63□□□□□ -0.55
GNE-202ENST00000396594 DOCK11Q5JSL3 2073 aa11.62□□□□□ -0.55
GNE-202ENST00000396594 NUPR1O60356 82 aa11.62□□□□□ -0.55
GNE-202ENST00000396594 WISP2O76076 250 aa11.62□□□□□ -0.55
GNE-202ENST00000396594 ZNF22P17026 224 aaPredicted RBP11.62□□□□□ -0.55
GNE-202ENST00000396594 FOXI1Q12951 378 aa11.62□□□□□ -0.55
GNE-202ENST00000396594 COX8CQ7Z4L0 72 aa11.62□□□□□ -0.55
GNE-202ENST00000396594 TRBV30A0A0K0K1B3 111 aa11.62□□□□□ -0.55
GNE-202ENST00000396594 LINC00269Q8N2A0 174 aa11.62□□□□□ -0.55
GNE-202ENST00000396594 CHD3Q12873 2000 aaKnown RBP11.61□□□□□ -0.55
GNE-202ENST00000396594 TAX1BP3O14907 124 aa11.61□□□□□ -0.55
GNE-202ENST00000396594 SYCNQ0VAF6 134 aa11.6□□□□□ -0.55
GNE-202ENST00000396594 C1orf229Q6ZS94 237 aaPredicted RBP11.6□□□□□ -0.55
GNE-202ENST00000396594 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
GNE-202ENST00000396594 CHKB-CPT1BH3BT56 60 aa11.6□□□□□ -0.55
GNE-202ENST00000396594 IGLV2-11P01706 119 aa11.59□□□□□ -0.55
GNE-202ENST00000396594 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
GNE-202ENST00000396594 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
GNE-202ENST00000396594 MED13Q9UHV7 2174 aa11.59□□□□□ -0.55
GNE-202ENST00000396594 C22orf34Q6ZV56 151 aa11.59□□□□□ -0.55
GNE-202ENST00000396594 M0R378 163 aa11.58□□□□□ -0.56
GNE-202ENST00000396594 NUPR2A6NF83 97 aa11.58□□□□□ -0.56
GNE-202ENST00000396594 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
GNE-202ENST00000396594 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
GNE-202ENST00000396594 DOCK7Q96N67 2140 aa11.57□□□□□ -0.56
GNE-202ENST00000396594 UPK3BQ9BT76 320 aa11.57□□□□□ -0.56
GNE-202ENST00000396594 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
GNE-202ENST00000396594 LINC00308Q8TCZ7 52 aa11.56□□□□□ -0.56
GNE-202ENST00000396594 TP53TG3Q9ULZ0 132 aa11.56□□□□□ -0.56
GNE-202ENST00000396594 POLR2KP53803 58 aaKnown RBP11.56□□□□□ -0.56
GNE-202ENST00000396594 Q8N976 141 aa11.56□□□□□ -0.56
GNE-202ENST00000396594 Q8IZM0 81 aa11.55□□□□□ -0.56
GNE-202ENST00000396594 ATP5EP56381 51 aaPredicted RBP11.54□□□□□ -0.56
GNE-202ENST00000396594 BPY2O14599 106 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 TSHBP01222 138 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 CRIP1P50238 77 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 CDKN2A-AS1Q9UH64 79 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 WNK2Q9Y3S1 2297 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 RNASE3P12724 160 aaKnown RBP11.53□□□□□ -0.56
GNE-202ENST00000396594 UBE2D3P61077 147 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 UBE2D2P62837 147 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 NRACQ8N912 160 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 ROS1P08922 2347 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 GDF5OSQ5U4N7 250 aa11.53□□□□□ -0.56
GNE-202ENST00000396594 RBX1P62877 108 aa11.52□□□□□ -0.56
GNE-202ENST00000396594 LINC00482Q8N8I6 264 aa11.52□□□□□ -0.56
GNE-202ENST00000396594 CSDC2Q9Y534 153 aaKnown RBP11.52□□□□□ -0.56
GNE-202ENST00000396594 SHANK1Q9Y566 2161 aa11.52□□□□□ -0.57
GNE-202ENST00000396594 IGLV1-51P01701 117 aa11.52□□□□□ -0.57
GNE-202ENST00000396594 POLEQ07864 2286 aa11.52□□□□□ -0.57
GNE-202ENST00000396594 PTPRSQ13332 1948 aa11.52□□□□□ -0.57
GNE-202ENST00000396594 IMUPQ9GZP8 106 aa11.51□□□□□ -0.57
GNE-202ENST00000396594 ESM1Q9NQ30 184 aa11.51□□□□□ -0.57
GNE-202ENST00000396594 ARFGEF3Q5TH69 2177 aa11.51□□□□□ -0.57
GNE-202ENST00000396594 UBE2D4Q9Y2X8 147 aa11.51□□□□□ -0.57
GNE-202ENST00000396594 CADP27708 2225 aa11.51□□□□□ -0.57
GNE-202ENST00000396594 PCDH15Q96QU1 1955 aa11.51□□□□□ -0.57
GNE-202ENST00000396594 NDUFC2O95298 119 aa11.51□□□□□ -0.57
GNE-202ENST00000396594 ARHGAP21Q5T5U3 1957 aa11.5□□□□□ -0.57
GNE-202ENST00000396594 DEFB4AO15263 64 aa11.5□□□□□ -0.57
GNE-202ENST00000396594 SEC61GP60059 68 aa11.5□□□□□ -0.57
GNE-202ENST00000396594 KPRPQ5T749 579 aaPredicted RBP11.5□□□□□ -0.57
GNE-202ENST00000396594 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
GNE-202ENST00000396594 CDPF1Q6NVV7 123 aa11.5□□□□□ -0.57
GNE-202ENST00000396594 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.5□□□□□ -0.57
GNE-202ENST00000396594 G3V4G9 280 aa11.49□□□□□ -0.57
GNE-202ENST00000396594 DEFB1P60022 68 aa11.49□□□□□ -0.57
GNE-202ENST00000396594 FAM19A1Q7Z5A9 133 aa11.49□□□□□ -0.57
GNE-202ENST00000396594 MRPS12O15235 138 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms