RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CUL9Q8IWT3 2517 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 MYO16Q9Y6X6 1858 aa2.8□□□□□ -1.96
GABPB1-204ENST00000396464 F8W1H4 67 aa2.8□□□□□ -1.96
GABPB1-204ENST00000396464 IGKCP01834 107 aa2.8□□□□□ -1.96
GABPB1-204ENST00000396464 ASIPP42127 132 aa2.8□□□□□ -1.96
GABPB1-204ENST00000396464 POLR2JP52435 117 aaKnown RBP2.8□□□□□ -1.96
GABPB1-204ENST00000396464 MOBPQ13875 183 aa2.8□□□□□ -1.96
GABPB1-204ENST00000396464 RPL7L1Q6DKI1 246 aaKnown RBP2.8□□□□□ -1.96
GABPB1-204ENST00000396464 SLC48A1Q6P1K1 146 aa2.8□□□□□ -1.96
GABPB1-204ENST00000396464 CHD3Q12873 2000 aaKnown RBP2.8□□□□□ -1.96
GABPB1-204ENST00000396464 ANK1P16157 1881 aa2.8□□□□□ -1.96
GABPB1-204ENST00000396464 PLXNA2O75051 1894 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 IGKV2D-24A0A075B6R9 120 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 SNRNP200O75643 2136 aaKnown RBP2.79□□□□□ -1.96
GABPB1-204ENST00000396464 GYPAP02724 150 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 TFF1P04155 84 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 FREM3P0C091 2139 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 CNBPP62633 177 aaKnown RBP2.79□□□□□ -1.96
GABPB1-204ENST00000396464 DEFB103AP81534 67 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 C15orf53Q8NAA6 179 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 SPTSSBQ8NFR3 76 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 PPDPFLQ8WWR9 84 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 TSLPQ969D9 159 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 MRPL35Q9NZE8 188 aaKnown RBP2.79□□□□□ -1.96
GABPB1-204ENST00000396464 TSC2P49815 1807 aa2.79□□□□□ -1.96
GABPB1-204ENST00000396464 NOTCH2Q04721 2471 aa2.78□□□□□ -1.96
GABPB1-204ENST00000396464 IGLV4-60A0A075B6I1 120 aa2.78□□□□□ -1.96
GABPB1-204ENST00000396464 RTL8CO15255 209 aa2.78□□□□□ -1.96
GABPB1-204ENST00000396464 CYB5AP00167 134 aa2.78□□□□□ -1.96
GABPB1-204ENST00000396464 PDE6HQ13956 83 aa2.78□□□□□ -1.96
GABPB1-204ENST00000396464 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-204ENST00000396464 KRTAP11-1Q8IUC1 163 aa2.78□□□□□ -1.96
GABPB1-204ENST00000396464 C20orf78Q9BR46 151 aa2.78□□□□□ -1.96
GABPB1-204ENST00000396464 PLXNA4Q9HCM2 1894 aa2.78□□□□□ -1.96
GABPB1-204ENST00000396464 CXorf51AA0A1B0GTR3 108 aa2.77□□□□□ -1.97
GABPB1-204ENST00000396464 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
GABPB1-204ENST00000396464 IGFBP7Q16270 282 aa2.77□□□□□ -1.97
GABPB1-204ENST00000396464 ALKAL2Q6UX46 152 aa2.77□□□□□ -1.97
GABPB1-204ENST00000396464 LINC00052Q96N35 136 aa2.77□□□□□ -1.97
GABPB1-204ENST00000396464 TIMM21Q9BVV7 248 aa2.77□□□□□ -1.97
GABPB1-204ENST00000396464 SEC16AO15027 2179 aa2.77□□□□□ -1.97
GABPB1-204ENST00000396464 MKI67P46013 3256 aaKnown RBP2.77□□□□□ -1.97
GABPB1-204ENST00000396464 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 SMIM31A0A1B0GVY4 71 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 HCG22E2RYF7 251 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 TNRC18O15417 2968 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-204ENST00000396464 RNASE2P10153 161 aaKnown RBP2.76□□□□□ -1.97
GABPB1-204ENST00000396464 FAUP35544 74 aaKnown RBP2.76□□□□□ -1.97
GABPB1-204ENST00000396464 C1orf137Q5JT78 98 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 ZNF431Q8TF32 576 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-204ENST00000396464 S100A13Q99584 98 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 NINQ8N4C6 2090 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 PATJQ8NI35 1801 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 TRBV7-7A0A0K0K1E9 115 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 LRCOL1A6NCL2 159 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 CCL16O15467 120 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 NUPR1O60356 82 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 SFT2D2O95562 160 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 GNG11P61952 73 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 LYPD1Q8N2G4 141 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 OR10AG1Q8NH19 301 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 CMTM2Q8TAZ6 248 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 S100A16Q96FQ6 103 aaKnown RBP2.76□□□□□ -1.97
GABPB1-204ENST00000396464 LINC00167Q96N53 147 aa2.76□□□□□ -1.97
GABPB1-204ENST00000396464 RP1P56715 2156 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 TRAV13-2A0A0B4J235 113 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 IGLC7A0M8Q6 106 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 ATOX1O00244 68 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 HCRTO43612 131 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 IGHV3-33P01772 117 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 KRTDAPP60985 99 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 SEC11AP67812 179 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 CCL8P80075 99 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 CSAG1Q6PB30 78 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 LYPD5Q6UWN5 251 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 FAM213BQ8TBF2 198 aa2.75□□□□□ -1.97
GABPB1-204ENST00000396464 COL4A6Q14031 1691 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 PCNX2A6NKB5 2137 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 TRBV10-3A0A0K0K1G6 114 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 TMEM30CPA0ZSE6 113 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 ELOBQ15370 118 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 TPRXLQ17RH7 258 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 KIAA1549LQ6ZVL6 1849 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 DEFB123Q8N688 67 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 MYOZ3Q8TDC0 251 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 CYTL1Q9NRR1 136 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 TET1Q8NFU7 2136 aa2.74□□□□□ -1.97
GABPB1-204ENST00000396464 LAMA2P24043 3122 aaKnown RBP2.73□□□□□ -1.97
GABPB1-204ENST00000396464 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
GABPB1-204ENST00000396464 IFI27L1Q96BM0 104 aa2.73□□□□□ -1.97
GABPB1-204ENST00000396464 UQCR10Q9UDW1 63 aa2.73□□□□□ -1.97
GABPB1-204ENST00000396464 C22orf24Q9Y442 160 aa2.73□□□□□ -1.97
GABPB1-204ENST00000396464 MUC22E2RYF6 1773 aaPredicted RBP2.73□□□□□ -1.97
GABPB1-204ENST00000396464 KIAA0100Q14667 2235 aaKnown RBP2.72□□□□□ -1.97
GABPB1-204ENST00000396464 NUMA1Q14980 2115 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 PTPRDP23468 1912 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 NAP1L6A6NFF2 107 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 A8MU10 97 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 TRAPPC2P0DI81 140 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms