RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 C22orf34Q6ZV56 151 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 SLC50A1Q9BRV3 221 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 MOB4Q9Y3A3 225 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 COL6A5A8TX70 2615 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 IGHV1OR15-1A0A075B7D0 117 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 H7C423 109 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 UBE2D3P61077 147 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 UBE2D2P62837 147 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 C20orf173Q96LM9 149 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 FAM19A4Q96LR4 140 aa6.46□□□□□ -1.38
NDE1-202ENST00000396355 RPL18AQ02543 176 aaKnown RBP6.45□□□□□ -1.38
NDE1-202ENST00000396355 TPSG1Q9NRR2 321 aa6.45□□□□□ -1.38
NDE1-202ENST00000396355 A0A0J9YXV3 536 aa6.45□□□□□ -1.38
NDE1-202ENST00000396355 TNFRSF13BO14836 293 aaPredicted RBP6.45□□□□□ -1.38
NDE1-202ENST00000396355 ZNF876PQ49A33 203 aa6.45□□□□□ -1.38
NDE1-202ENST00000396355 C17orf58Q2M2W7 97 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 NIPBLQ6KC79 2804 aaeCLIP6.44□□□□□ -1.38
NDE1-202ENST00000396355 NBR2O15453 112 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 ATP5G1P05496 136 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 PSMB8P28062 276 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 BSPH1Q075Z2 132 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 E7EUB6 86 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 CGB3P0DN86 165 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 CGB7P0DN87 165 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 FLNAP21333 2647 aaKnown RBP6.44□□□□□ -1.38
NDE1-202ENST00000396355 KHDC1LQ5JSQ8 128 aa6.44□□□□□ -1.38
NDE1-202ENST00000396355 LHBP01229 141 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 ELANEP08246 267 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 UBE2D1P51668 147 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 PIFOQ8TCI5 191 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 I3L3M4 83 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 CRIP1P50238 77 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 CDSNQ15517 529 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 C19orf54Q5BKX5 351 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 SMR3AQ99954 134 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 FAM215AQ9Y5M1 114 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 VPS13CQ709C8 3753 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 FAM240AA0A1B0GVK7 77 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 NDUFC2-KCTD14E9PQ53 114 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 DPH3P1Q9H4G8 78 aa6.43□□□□□ -1.38
NDE1-202ENST00000396355 PAX4O43316 350 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 CRPP02741 224 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 PRIMA1Q86XR5 153 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 LAMTOR3Q9UHA4 124 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 LY6HO94772 140 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 IGHV3-30P01768 117 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 IGHV3-30-5P0DP03 117 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 GATA4P43694 442 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 SNRPD3P62318 126 aaKnown RBP6.42□□□□□ -1.38
NDE1-202ENST00000396355 SS18Q15532 418 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 TMEM86BQ8N661 226 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 APCP25054 2843 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 TRBV7-1A0A0A6YYK4 115 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 SDHAF1A6NFY7 115 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 GP9P14770 177 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 LINC00158P58513 81 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 ENHOQ6UWT2 76 aa6.42□□□□□ -1.38
NDE1-202ENST00000396355 ZNF80P51504 273 aaPredicted RBP6.41□□□□□ -1.38
NDE1-202ENST00000396355 CCL19Q99731 98 aa6.41□□□□□ -1.38
NDE1-202ENST00000396355 IMUPQ9GZP8 106 aa6.41□□□□□ -1.38
NDE1-202ENST00000396355 IGHV1-46P01743 117 aa6.41□□□□□ -1.38
NDE1-202ENST00000396355 LINC00311Q8N616 119 aa6.41□□□□□ -1.38
NDE1-202ENST00000396355 Q96MF0 132 aa6.41□□□□□ -1.38
NDE1-202ENST00000396355 NDUFA4L2Q9NRX3 87 aa6.41□□□□□ -1.38
NDE1-202ENST00000396355 VCYO14598 125 aa6.41□□□□□ -1.38
NDE1-202ENST00000396355 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
NDE1-202ENST00000396355 RNASE6Q93091 150 aaKnown RBP6.41□□□□□ -1.38
NDE1-202ENST00000396355 IGLV3-9A0A075B6K5 115 aa6.4□□□□□ -1.38
NDE1-202ENST00000396355 SMIM26A0A096LP01 95 aa6.4□□□□□ -1.38
NDE1-202ENST00000396355 A0A0G2JNJ9 132 aa6.4□□□□□ -1.38
NDE1-202ENST00000396355 TIRAPP58753 221 aa6.4□□□□□ -1.38
NDE1-202ENST00000396355 DEFB113Q30KQ7 82 aa6.4□□□□□ -1.38
NDE1-202ENST00000396355 SHANK2-AS3Q9BTD1 123 aa6.4□□□□□ -1.38
NDE1-202ENST00000396355 Q9UFV3 132 aa6.4□□□□□ -1.38
NDE1-202ENST00000396355 GAFA1Q96PS6 74 aa6.4□□□□□ -1.39
NDE1-202ENST00000396355 HRNRQ86YZ3 2850 aaPredicted RBP6.4□□□□□ -1.39
NDE1-202ENST00000396355 C17orf100A8MU93 164 aa6.4□□□□□ -1.39
NDE1-202ENST00000396355 A8MZ25 164 aa6.4□□□□□ -1.39
NDE1-202ENST00000396355 F8WEM9 126 aa6.39□□□□□ -1.39
NDE1-202ENST00000396355 WIPF1O43516 503 aa6.39□□□□□ -1.39
NDE1-202ENST00000396355 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
NDE1-202ENST00000396355 ZNRF2Q8NHG8 242 aa6.39□□□□□ -1.39
NDE1-202ENST00000396355 IGHV3OR16-10A0A075B7F0 116 aa6.39□□□□□ -1.39
NDE1-202ENST00000396355 BUB3O43684 328 aa6.39□□□□□ -1.39
NDE1-202ENST00000396355 LINC01561Q8N1V8 128 aa6.39□□□□□ -1.39
NDE1-202ENST00000396355 MAPK1IP1LQ8NDC0 245 aa6.39□□□□□ -1.39
NDE1-202ENST00000396355 HILS1P60008 231 aa6.38□□□□□ -1.39
NDE1-202ENST00000396355 SLPIP03973 132 aa6.38□□□□□ -1.39
NDE1-202ENST00000396355 RPL36AP83881 106 aaKnown RBP6.38□□□□□ -1.39
NDE1-202ENST00000396355 PRR4Q16378 134 aa6.38□□□□□ -1.39
NDE1-202ENST00000396355 RPL36ALQ969Q0 106 aaKnown RBP6.38□□□□□ -1.39
NDE1-202ENST00000396355 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.38□□□□□ -1.39
NDE1-202ENST00000396355 INAFM1C9JVW0 142 aa6.38□□□□□ -1.39
NDE1-202ENST00000396355 LY6G5BQ8NDX9 201 aa6.38□□□□□ -1.39
NDE1-202ENST00000396355 TRBV12-3P01733 135 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 CLEC19AQ6UXS0 136 aa6.37□□□□□ -1.39
NDE1-202ENST00000396355 C7orf69Q9H7B7 122 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms