RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 ELANEP08246 267 aa7.79□□□□□ -1.16
ACTN1-203ENST00000394419 SPINK8P0C7L1 97 aa7.79□□□□□ -1.16
ACTN1-203ENST00000394419 FAM19A4Q96LR4 140 aa7.79□□□□□ -1.16
ACTN1-203ENST00000394419 Q96MF0 132 aa7.79□□□□□ -1.16
ACTN1-203ENST00000394419 Q9UF83 564 aa7.79□□□□□ -1.16
ACTN1-203ENST00000394419 MUSTN1Q8IVN3 82 aa7.79□□□□□ -1.16
ACTN1-203ENST00000394419 ITPR3Q14573 2671 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 A8MWV9 139 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 LGALS9O00182 355 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 NDUFA11Q86Y39 141 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 PEMTQ9UBM1 199 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 USP24Q9UPU5 2620 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 KRTAP10-9P60411 292 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 HERV-K104P63124 156 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 STHQ8IWL8 128 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 DAND5Q8N907 189 aa7.78□□□□□ -1.16
ACTN1-203ENST00000394419 LINC01619G3V211 115 aa7.77□□□□□ -1.16
ACTN1-203ENST00000394419 CFHR3Q02985 330 aa7.77□□□□□ -1.16
ACTN1-203ENST00000394419 ZNF415Q09FC8 603 aa7.77□□□□□ -1.16
ACTN1-203ENST00000394419 CFC1BP0CG36 223 aa7.77□□□□□ -1.17
ACTN1-203ENST00000394419 CFC1P0CG37 223 aa7.77□□□□□ -1.17
ACTN1-203ENST00000394419 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
ACTN1-203ENST00000394419 TRAV13-1A0A0B4J241 112 aa7.77□□□□□ -1.17
ACTN1-203ENST00000394419 RHODO00212 210 aa7.77□□□□□ -1.17
ACTN1-203ENST00000394419 RHOHQ15669 191 aa7.77□□□□□ -1.17
ACTN1-203ENST00000394419 IGLV4-3A0A075B6K6 122 aa7.76□□□□□ -1.17
ACTN1-203ENST00000394419 TCL1BO95988 128 aa7.76□□□□□ -1.17
ACTN1-203ENST00000394419 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
ACTN1-203ENST00000394419 C10orf126Q8N4M7 172 aa7.76□□□□□ -1.17
ACTN1-203ENST00000394419 NDUFA12Q9UI09 145 aa7.76□□□□□ -1.17
ACTN1-203ENST00000394419 SLC25A29Q8N8R3 303 aa7.76□□□□□ -1.17
ACTN1-203ENST00000394419 M0R2P5 195 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 RBMY1A1P0DJD3 496 aaKnown RBP7.75□□□□□ -1.17
ACTN1-203ENST00000394419 RBMY1CP0DJD4 496 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 RBMY1FQ15415 496 aaKnown RBP7.75□□□□□ -1.17
ACTN1-203ENST00000394419 H3BMM0 161 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 LEPROTO15243 131 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 IGHV3-30-3P0DP02 117 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 ZNF702PQ9H963 129 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 NXPH4O95158 308 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 IGHV3-30P01768 117 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 IGHV3-30-5P0DP03 117 aa7.75□□□□□ -1.17
ACTN1-203ENST00000394419 RPL35AP18077 110 aaKnown RBP7.74□□□□□ -1.17
ACTN1-203ENST00000394419 FOXI1Q12951 378 aa7.74□□□□□ -1.17
ACTN1-203ENST00000394419 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
ACTN1-203ENST00000394419 NBEAL2Q6ZNJ1 2754 aa7.74□□□□□ -1.17
ACTN1-203ENST00000394419 INSP01308 110 aa7.74□□□□□ -1.17
ACTN1-203ENST00000394419 NIPBLQ6KC79 2804 aaeCLIP7.73□□□□□ -1.17
ACTN1-203ENST00000394419 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 J3QLI3 93 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 Q6ZSN1 163 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 TRGV2A0A075B6R0 118 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 GAGE12JA6NER3 117 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 B5MCH6 92 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 IGHV4-31P0DP07 118 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 UBE2D1P51668 147 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 GAGE4Q13068 117 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 GAGE5Q13069 117 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 Q6YL49 198 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 Q6ZUT4 128 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 TOMM7Q9P0U1 55 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 NSUN5P1Q3KNT7 163 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 HIST2H2BCQ6DN03 193 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 C1QTNF4Q9BXJ3 329 aa7.73□□□□□ -1.17
ACTN1-203ENST00000394419 SLC25A20O43772 301 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 COX6CP09669 75 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 RNF183Q96D59 192 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 LINC00467Q9BRT7 94 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 MAP6D1Q9H9H5 199 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 TRBV20-1A0A075B6N2 111 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 A0A0J9YXY3 114 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 BRI3O95415 125 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 Q6ZSV7 163 aa7.72□□□□□ -1.17
ACTN1-203ENST00000394419 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.71□□□□□ -1.17
ACTN1-203ENST00000394419 UBE2L6O14933 153 aa7.71□□□□□ -1.17
ACTN1-203ENST00000394419 CFAP126Q5VTH2 177 aa7.71□□□□□ -1.17
ACTN1-203ENST00000394419 ANKRD29Q8N6D5 301 aa7.71□□□□□ -1.17
ACTN1-203ENST00000394419 ODF3Q96PU9 254 aa7.71□□□□□ -1.17
ACTN1-203ENST00000394419 FASNP49327 2511 aaKnown RBP7.71□□□□□ -1.18
ACTN1-203ENST00000394419 RPL32P62910 135 aaKnown RBP7.71□□□□□ -1.18
ACTN1-203ENST00000394419 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.18
ACTN1-203ENST00000394419 RBMY1BA6NDE4 496 aaKnown RBP7.71□□□□□ -1.18
ACTN1-203ENST00000394419 RBMY1EA6NEQ0 496 aaKnown RBP7.71□□□□□ -1.18
ACTN1-203ENST00000394419 RBMY1DP0C7P1 496 aaKnown RBP7.71□□□□□ -1.18
ACTN1-203ENST00000394419 CIRBPQ14011 172 aaKnown RBP7.71□□□□□ -1.18
ACTN1-203ENST00000394419 NTN5Q8WTR8 489 aaPredicted RBP7.71□□□□□ -1.18
ACTN1-203ENST00000394419 GCN1Q92616 2671 aaKnown RBP7.7□□□□□ -1.18
ACTN1-203ENST00000394419 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
ACTN1-203ENST00000394419 NFE4Q86UQ8 179 aa7.7□□□□□ -1.18
ACTN1-203ENST00000394419 CITED1Q99966 193 aa7.7□□□□□ -1.18
ACTN1-203ENST00000394419 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
ACTN1-203ENST00000394419 NDUFA7O95182 113 aa7.7□□□□□ -1.18
ACTN1-203ENST00000394419 NOP10Q9NPE3 64 aaKnown RBP7.7□□□□□ -1.18
ACTN1-203ENST00000394419 HECTD1Q9ULT8 2610 aa7.7□□□□□ -1.18
ACTN1-203ENST00000394419 GAGE7O76087 117 aa7.69□□□□□ -1.18
ACTN1-203ENST00000394419 GAGE12FP0CL80 117 aa7.69□□□□□ -1.18
ACTN1-203ENST00000394419 GAGE12GP0CL81 117 aa7.69□□□□□ -1.18
ACTN1-203ENST00000394419 GAGE12IP0CL82 117 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms