RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PI4KAP42356 2102 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 LRP6O75581 1613 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 LAMC1P11047 1609 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 DAPK1P53355 1430 aa-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 PLXNB2O15031 1838 aa-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 ARFGEF1Q9Y6D6 1849 aa-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 A0A1B0GV72 72 aa-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 S100GP29377 79 aa-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 KRTAP6-2Q3LI66 62 aa-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 MMGT1Q8N4V1 131 aa-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 C10orf82Q8WW14 230 aa-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 MRPL40Q9NQ50 206 aaKnown RBP-0.8□□□□□ -2.54
SNORD28B-201ENST00000390993 STARD9Q9P2P6 4700 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 TRBV20-1A0A075B6N2 111 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 TMEM238C9JI98 176 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 E2F6O75461 281 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 PPP1R17O96001 155 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 CMPK1P30085 196 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 CCL18P55774 89 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 UBE2G1P62253 170 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 RPS28P62857 69 aaKnown RBP-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 TMEM170BQ5T4T1 132 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 SCIMPQ6UWF3 145 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 DEFB105AQ8NG35 78 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 PSMG3Q9BT73 122 aaPredicted RBP-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 LSM2Q9Y333 95 aaKnown RBP-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 LRRC37A2A6NM11 1700 aa-0.81□□□□□ -2.54
SNORD28B-201ENST00000390993 USH2AO75445 5202 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 TRAV36DV7A0A075B6V5 113 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 PIGBOS1A0A0B4J2F0 54 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 CLPSL1A2RUU4 121 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 M0R135 149 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 SCTP09683 121 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 CBLN1P23435 193 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 DEFB135Q30KP9 77 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 Q6JHZ5 121 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 SPTSSBQ8NFR3 76 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 LINC00312Q9Y6C7 94 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 ERCC6Q03468 1493 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 HIVEP1P15822 2718 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 PAPPAQ13219 1627 aa-0.82□□□□□ -2.54
SNORD28B-201ENST00000390993 BICRAQ9NZM4 1560 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 A0A1B0GX51 115 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 SYS1-DBNDD2H3BUS1 97 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 SNCGO76070 127 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 TNFSF15O95150 251 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 IFNGP01579 166 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 APOC3P02656 99 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 CCL8P80075 99 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 TFAMQ00059 246 aaKnown RBP-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 AQP10Q96PS8 301 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 AGPAT4-IT1Q9H0P7 198 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 CENPHQ9H3R5 247 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 LINC00472Q9H8W2 130 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 SPANXA1Q9NS26 97 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 V9GYQ6 96 aa-0.83□□□□□ -2.54
SNORD28B-201ENST00000390993 PXDNQ92626 1479 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 TSTD3H0UI37 97 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 IL5P05113 134 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 DBIP07108 87 aaKnown RBP-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 COX8AP10176 69 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 DEFB123Q8N688 67 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 SPTSSAQ969W0 71 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 HIGD1AQ9Y241 93 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 HSPB11Q9Y547 144 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 V9GYH0 126 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 ARHGEF10O15013 1369 aa-0.84□□□□□ -2.54
SNORD28B-201ENST00000390993 UBR4Q5T4S7 5183 aa-0.85□□□□□ -2.54
SNORD28B-201ENST00000390993 POLA1P09884 1462 aaPredicted RBP-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 GAPVD1Q14C86 1478 aa-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 NDUFB6O95139 128 aa-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 NCR2O95944 276 aa-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 HIST1H1AQ02539 215 aaPredicted RBP-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 CCDC153Q494R4 210 aa-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 MIC13Q5XKP0 118 aa-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 TAC4Q86UU9 113 aa-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 SEC11CQ9BY50 192 aa-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 AKAP9Q99996 3911 aa-0.85□□□□□ -2.55
SNORD28B-201ENST00000390993 SHANK2Q9UPX8 1470 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 UQCR11O14957 56 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 G0S2P27469 103 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 GNG10P50151 68 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 TPPP2P59282 170 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 RRAS2P62070 204 aaPredicted RBP-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 BAGE2Q86Y30 109 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 USMG5Q96IX5 58 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 LENEPQ9Y5L5 61 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 HTTP42858 3142 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 TMEM2Q9UHN6 1383 aa-0.86□□□□□ -2.55
SNORD28B-201ENST00000390993 EPG5Q9HCE0 2579 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 MYH8P13535 1937 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 NSD3Q9BZ95 1437 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 MUC22E2RYF6 1773 aaPredicted RBP-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 J3QR89 54 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 SIX6O95475 246 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 S100A5P33763 92 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 S100A7L2Q5SY68 101 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 C10orf128Q5T292 105 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 GINS2Q9Y248 185 aa-0.87□□□□□ -2.55
SNORD28B-201ENST00000390993 MRC1P22897 1456 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms