RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 HIST1H2BAQ96A08 127 aa4.44□□□□□ -1.7
TRAV27-201ENST00000390457 ACTR3CQ9C0K3 210 aaPredicted RBP4.44□□□□□ -1.7
TRAV27-201ENST00000390457 A0A087WYN8 130 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 TMSB15BA0A087X1C1 80 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 A0A0D9SG52 128 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 A0A1B0GW15 77 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 RAB19A4D1S5 217 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 PTTG1O95997 202 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 LTAP01374 205 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 IFNA7P01567 189 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 G0S2P27469 103 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 OR10AG1Q8NH19 301 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 RNF185Q96GF1 192 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 NKX6-2Q9C056 277 aaPredicted RBP4.43□□□□□ -1.7
TRAV27-201ENST00000390457 PLAC8Q9NZF1 115 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 KIF25-AS1Q9Y6Z4 181 aa4.43□□□□□ -1.7
TRAV27-201ENST00000390457 CTXND1A0A1B0GTU2 59 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 TMEM238C9JI98 176 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 SNAI2O43623 268 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 CXCL1P09341 107 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 PKIAP61925 76 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 MUC2Q02817 5179 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 IQCJQ1A5X6 159 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 C5orf47Q569G3 176 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 Q5BKY6 102 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 LINC00269Q8N2A0 174 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 C20orf203Q8NBC4 194 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 SPACA4Q8TDM5 124 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 FMC1Q96HJ9 113 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 CHCHD5Q9BSY4 110 aa4.42□□□□□ -1.7
TRAV27-201ENST00000390457 SMLR1H3BR10 107 aa4.41□□□□□ -1.7
TRAV27-201ENST00000390457 OR5AL1P0C617 328 aa4.41□□□□□ -1.7
TRAV27-201ENST00000390457 CHTF8P0CG12 524 aa4.41□□□□□ -1.7
TRAV27-201ENST00000390457 GAGE6Q13070 117 aa4.41□□□□□ -1.7
TRAV27-201ENST00000390457 TMEM97Q5BJF2 176 aa4.41□□□□□ -1.7
TRAV27-201ENST00000390457 RPL7L1Q6DKI1 246 aaKnown RBP4.41□□□□□ -1.7
TRAV27-201ENST00000390457 CLPSL2Q6UWE3 100 aa4.41□□□□□ -1.7
TRAV27-201ENST00000390457 MLST8Q9BVC4 326 aa4.41□□□□□ -1.7
TRAV27-201ENST00000390457 GFRA4Q9GZZ7 299 aa4.41□□□□□ -1.7
TRAV27-201ENST00000390457 IGLV10-54A0A075B6I4 117 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 TRAV8-4A0A0B4J246 113 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 A0A1B0GUV1 79 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 PHOX2AO14813 284 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 P01737 135 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 REG3AQ06141 175 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 ZNF56Q15929 161 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 PACRGQ96M98 296 aaPredicted RBP4.4□□□□□ -1.71
TRAV27-201ENST00000390457 TCEAL7Q9BRU2 100 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 DERL1Q9BUN8 251 aa4.4□□□□□ -1.71
TRAV27-201ENST00000390457 ZNF471Q9BX82 626 aaPredicted RBP4.4□□□□□ -1.71
TRAV27-201ENST00000390457 IGLV4-60A0A075B6I1 120 aa4.39□□□□□ -1.71
TRAV27-201ENST00000390457 TRBV25-1A0A075B6N4 114 aa4.39□□□□□ -1.71
TRAV27-201ENST00000390457 A0A0J9YXV3 536 aa4.39□□□□□ -1.71
TRAV27-201ENST00000390457 hDV102S1A0JD36 115 aa4.39□□□□□ -1.71
TRAV27-201ENST00000390457 M0QY20 66 aa4.39□□□□□ -1.71
TRAV27-201ENST00000390457 UBE2G1P62253 170 aa4.39□□□□□ -1.71
TRAV27-201ENST00000390457 C15orf56Q8N910 161 aa4.39□□□□□ -1.71
TRAV27-201ENST00000390457 ALG5Q9Y673 324 aa4.39□□□□□ -1.71
TRAV27-201ENST00000390457 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.38□□□□□ -1.71
TRAV27-201ENST00000390457 IGHV1-24A0A0C4DH33 117 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 MUC21A0A0G2JKD1 596 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 MUC21A0A140T8X8 626 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 MAP1LC3B2A6NCE7 125 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 G3V3Q6 166 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 GZMBP10144 247 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 PRR3P79522 188 aaKnown RBP4.38□□□□□ -1.71
TRAV27-201ENST00000390457 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.38□□□□□ -1.71
TRAV27-201ENST00000390457 INO80EQ8NBZ0 244 aaPredicted RBP4.38□□□□□ -1.71
TRAV27-201ENST00000390457 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 MAP1LC3CQ9BXW4 147 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 MAP1LC3BQ9GZQ8 125 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 CYTL1Q9NRR1 136 aa4.38□□□□□ -1.71
TRAV27-201ENST00000390457 F5H697 171 aa4.37□□□□□ -1.71
TRAV27-201ENST00000390457 GIPP09681 153 aaPredicted RBP4.37□□□□□ -1.71
TRAV27-201ENST00000390457 AKR1C3P42330 323 aa4.37□□□□□ -1.71
TRAV27-201ENST00000390457 DEFA1P59665 94 aa4.37□□□□□ -1.71
TRAV27-201ENST00000390457 DEFA3P59666 94 aa4.37□□□□□ -1.71
TRAV27-201ENST00000390457 HERV-K104P63124 156 aa4.37□□□□□ -1.71
TRAV27-201ENST00000390457 COX6A2Q02221 97 aa4.37□□□□□ -1.71
TRAV27-201ENST00000390457 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
TRAV27-201ENST00000390457 SPANXN1Q5VSR9 72 aa4.37□□□□□ -1.71
TRAV27-201ENST00000390457 BOD1L2Q8IYS8 172 aa4.37□□□□□ -1.71
TRAV27-201ENST00000390457 BORCS7-ASMTA0A0B4J1R7 106 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 IGLC6P0CF74 106 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 RPS10P46783 165 aaKnown RBP4.36□□□□□ -1.71
TRAV27-201ENST00000390457 RNF151Q2KHN1 245 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 AKR1C8PQ5T2L2 129 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 SUMO4Q6EEV6 95 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 BAGE2Q86Y30 109 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 C7orf33Q8WU49 177 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 MBD3L1Q8WWY6 194 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 DPH3Q96FX2 82 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 PGLYRP4Q96LB8 373 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 AP1S3Q96PC3 154 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 TMEM243Q9BU79 118 aa4.36□□□□□ -1.71
TRAV27-201ENST00000390457 RAB5CP51148 216 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms