RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 X6R8D5 127 aa8.75□□□□□ -1.01
SPTBN1-203ENST00000389980 APOC4P55056 127 aa8.74□□□□□ -1.01
SPTBN1-203ENST00000389980 Q8N8P6 123 aa8.74□□□□□ -1.01
SPTBN1-203ENST00000389980 Q9UF83 564 aa8.74□□□□□ -1.01
SPTBN1-203ENST00000389980 IGHV3-53P01767 116 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 FGF6P10767 208 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 PIK3CD-AS1Q5SR53 167 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 KIR2DL5BQ8NHK3 375 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 SMIM2Q9BVW6 85 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 NXT2Q9NPJ8 142 aaKnown RBP8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 SPCS1Q9Y6A9 102 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 PRSS47A8MTI9 375 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 H3BUT2 72 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 RS1O15537 224 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 GAGE7O76087 117 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 GAGE12FP0CL80 117 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 GAGE12GP0CL81 117 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 GAGE12IP0CL82 117 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 TCTAP57738 103 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 DAZ2Q13117 558 aaKnown RBP8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 LGALS9CQ6DKI2 356 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 ZNF479Q96JC4 524 aa8.73□□□□□ -1.01
SPTBN1-203ENST00000389980 DEFB4AO15263 64 aa8.72□□□□□ -1.01
SPTBN1-203ENST00000389980 C20orf78Q9BR46 151 aa8.72□□□□□ -1.01
SPTBN1-203ENST00000389980 PRB2P02812 416 aaPredicted RBP8.72□□□□□ -1.01
SPTBN1-203ENST00000389980 OR11H2Q8NH07 326 aa8.72□□□□□ -1.01
SPTBN1-203ENST00000389980 IFI27L1Q96BM0 104 aa8.72□□□□□ -1.01
SPTBN1-203ENST00000389980 LINC01546A6NGU7 62 aa8.71□□□□□ -1.01
SPTBN1-203ENST00000389980 F8W1H4 67 aa8.71□□□□□ -1.01
SPTBN1-203ENST00000389980 SAMD5Q5TGI4 173 aa8.71□□□□□ -1.01
SPTBN1-203ENST00000389980 SPATA25Q9BR10 227 aa8.71□□□□□ -1.01
SPTBN1-203ENST00000389980 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.01
SPTBN1-203ENST00000389980 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
SPTBN1-203ENST00000389980 PPP1R17O96001 155 aa8.71□□□□□ -1.02
SPTBN1-203ENST00000389980 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
SPTBN1-203ENST00000389980 HIGD1BQ9P298 99 aa8.71□□□□□ -1.02
SPTBN1-203ENST00000389980 TRGV2A0A075B6R0 118 aa8.7□□□□□ -1.02
SPTBN1-203ENST00000389980 FCER1GP30273 86 aa8.7□□□□□ -1.02
SPTBN1-203ENST00000389980 POLR2KP53803 58 aaKnown RBP8.7□□□□□ -1.02
SPTBN1-203ENST00000389980 LAGE3Q14657 143 aa8.7□□□□□ -1.02
SPTBN1-203ENST00000389980 TENM3Q9P273 2699 aa8.7□□□□□ -1.02
SPTBN1-203ENST00000389980 RHODO00212 210 aa8.69□□□□□ -1.02
SPTBN1-203ENST00000389980 TRAV4A0A0B4J268 109 aa8.69□□□□□ -1.02
SPTBN1-203ENST00000389980 GAGE12HA6NDE8 117 aa8.69□□□□□ -1.02
SPTBN1-203ENST00000389980 DEFB130BP0DP73 79 aa8.69□□□□□ -1.02
SPTBN1-203ENST00000389980 DEFB130AP0DP74 79 aa8.69□□□□□ -1.02
SPTBN1-203ENST00000389980 DKK2Q9UBU2 259 aa8.69□□□□□ -1.02
SPTBN1-203ENST00000389980 IGHV4-28A0A0C4DH34 117 aa8.68□□□□□ -1.02
SPTBN1-203ENST00000389980 TRBV6-5A0A0K0K1A5 114 aa8.68□□□□□ -1.02
SPTBN1-203ENST00000389980 SMIM9A6NGZ8 99 aa8.68□□□□□ -1.02
SPTBN1-203ENST00000389980 ZFP2Q6ZN57 461 aa8.68□□□□□ -1.02
SPTBN1-203ENST00000389980 RNF183Q96D59 192 aa8.68□□□□□ -1.02
SPTBN1-203ENST00000389980 H7C1H1 209 aa8.68□□□□□ -1.02
SPTBN1-203ENST00000389980 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
SPTBN1-203ENST00000389980 RETNQ9HD89 108 aa8.68□□□□□ -1.02
SPTBN1-203ENST00000389980 VCYO14598 125 aa8.67□□□□□ -1.02
SPTBN1-203ENST00000389980 RPL24P83731 157 aaKnown RBP8.67□□□□□ -1.02
SPTBN1-203ENST00000389980 TRBV27A0A0K0K1C4 114 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 PRSS1P07477 247 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 FAM222AQ5U5X8 452 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 DNHD1Q96M86 4753 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 TEX48A0A1B0GUV7 120 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 A8MZ25 164 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 RPL32P62910 135 aaKnown RBP8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 SLC25A29Q8N8R3 303 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 Q8NAQ8 132 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 TNFRSF18Q9Y5U5 241 aa8.66□□□□□ -1.02
SPTBN1-203ENST00000389980 CKS1BP61024 79 aa8.65□□□□□ -1.02
SPTBN1-203ENST00000389980 KIR2DL4Q99706 377 aa8.65□□□□□ -1.02
SPTBN1-203ENST00000389980 IGHV3-38A0A0C4DH36 116 aa8.65□□□□□ -1.03
SPTBN1-203ENST00000389980 SMAGPQ0VAQ4 97 aa8.65□□□□□ -1.03
SPTBN1-203ENST00000389980 ORMDL2Q53FV1 153 aa8.65□□□□□ -1.03
SPTBN1-203ENST00000389980 PHLDA1Q8WV24 401 aaPredicted RBP8.65□□□□□ -1.03
SPTBN1-203ENST00000389980 GTSF1LQ9H1H1 148 aa8.65□□□□□ -1.03
SPTBN1-203ENST00000389980 CELA1Q9UNI1 258 aa8.65□□□□□ -1.03
SPTBN1-203ENST00000389980 K7EQD1 137 aa8.64□□□□□ -1.03
SPTBN1-203ENST00000389980 TSHBP01222 138 aa8.64□□□□□ -1.03
SPTBN1-203ENST00000389980 TAL2Q16559 108 aa8.64□□□□□ -1.03
SPTBN1-203ENST00000389980 ZNRF2Q8NHG8 242 aa8.64□□□□□ -1.03
SPTBN1-203ENST00000389980 TRGV4A0A0C4DH28 118 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 LOC100131303A0A0U1RQF7 123 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 I3L3M4 83 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 MIFP14174 115 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 ODF1Q14990 250 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 C2orf66Q6UXQ4 117 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 LINC00612Q8N6U2 182 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 SPANXB1Q9NS25 103 aaPredicted RBP8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 FHL2Q14192 279 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 TM2D2Q9BX73 214 aa8.63□□□□□ -1.03
SPTBN1-203ENST00000389980 E9PLD3 99 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 K7EIL1 84 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 K7EMI3 77 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 TOMM6Q96B49 74 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 VCX2Q9H322 139 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 GAGE12JA6NER3 117 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 LYRM9A8MSI8 78 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 GAGE4Q13068 117 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms