RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 PGLYRP4Q96LB8 373 aa16.5■□□□□ 0.23
KRT18-201ENST00000388835 A0A1B0GUV1 79 aa16.49■□□□□ 0.23
KRT18-201ENST00000388835 AMTP48728 403 aa16.49■□□□□ 0.23
KRT18-201ENST00000388835 COTL1Q14019 142 aa16.49■□□□□ 0.23
KRT18-201ENST00000388835 TRAV26-2A0A0B4J265 109 aa16.48■□□□□ 0.23
KRT18-201ENST00000388835 GATD1Q8NB37 220 aa16.47■□□□□ 0.23
KRT18-201ENST00000388835 TRAV8-4A0A0B4J246 113 aa16.47■□□□□ 0.23
KRT18-201ENST00000388835 hDV102S1A0JD36 115 aa16.47■□□□□ 0.23
KRT18-201ENST00000388835 CLRN3Q8NCR9 226 aa16.47■□□□□ 0.23
KRT18-201ENST00000388835 CNFNQ9BYD5 112 aa16.47■□□□□ 0.23
KRT18-201ENST00000388835 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.47■□□□□ 0.23
KRT18-201ENST00000388835 PANO1I0J062 215 aa16.44■□□□□ 0.22
KRT18-201ENST00000388835 RPL37AP61513 92 aaKnown RBP16.44■□□□□ 0.22
KRT18-201ENST00000388835 ALKAL2Q6UX46 152 aa16.44■□□□□ 0.22
KRT18-201ENST00000388835 GTSF1Q8WW33 167 aa16.44■□□□□ 0.22
KRT18-201ENST00000388835 FOXA3P55318 350 aaPredicted RBP16.43■□□□□ 0.22
KRT18-201ENST00000388835 SDIM1Q6ZPB5 146 aa16.43■□□□□ 0.22
KRT18-201ENST00000388835 RPL39LQ96EH5 51 aaKnown RBP16.43■□□□□ 0.22
KRT18-201ENST00000388835 Q6ZNX1 250 aa16.43■□□□□ 0.22
KRT18-201ENST00000388835 IGKV3OR2-268A0A0C4DH90 116 aa16.42■□□□□ 0.22
KRT18-201ENST00000388835 GATCO43716 136 aaKnown RBP16.42■□□□□ 0.22
KRT18-201ENST00000388835 CEBPGP53567 150 aa16.42■□□□□ 0.22
KRT18-201ENST00000388835 SMIM15Q7Z3B0 74 aa16.42■□□□□ 0.22
KRT18-201ENST00000388835 AKAP14Q86UN6 197 aa16.42■□□□□ 0.22
KRT18-201ENST00000388835 hCG_2014768A0A024R1R8 64 aa16.41■□□□□ 0.22
KRT18-201ENST00000388835 BLOC1S1P78537 153 aa16.4■□□□□ 0.22
KRT18-201ENST00000388835 AP5S1Q9NUS5 200 aa16.4■□□□□ 0.22
KRT18-201ENST00000388835 LRP1Q07954 4544 aaKnown RBP16.4■□□□□ 0.22
KRT18-201ENST00000388835 CNBPP62633 177 aaKnown RBP16.39■□□□□ 0.21
KRT18-201ENST00000388835 TMEM250H0YL14 139 aa16.38■□□□□ 0.21
KRT18-201ENST00000388835 GAGE12HA6NDE8 117 aa16.38■□□□□ 0.21
KRT18-201ENST00000388835 AMMECR1LQ6DCA0 310 aa16.38■□□□□ 0.21
KRT18-201ENST00000388835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.37■□□□□ 0.21
KRT18-201ENST00000388835 IGKV2-29A2NJV5 120 aaPredicted RBP16.37■□□□□ 0.21
KRT18-201ENST00000388835 SLPIP03973 132 aa16.37■□□□□ 0.21
KRT18-201ENST00000388835 A8MWL6 223 aa16.36■□□□□ 0.21
KRT18-201ENST00000388835 RNASEKQ6P5S7 137 aaKnown RBP16.36■□□□□ 0.21
KRT18-201ENST00000388835 IGHV3-64A0A075B6Q5 118 aa16.35■□□□□ 0.21
KRT18-201ENST00000388835 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.35■□□□□ 0.21
KRT18-201ENST00000388835 FAM231DQ6ZW35 169 aa16.35■□□□□ 0.21
KRT18-201ENST00000388835 DPH3Q96FX2 82 aa16.35■□□□□ 0.21
KRT18-201ENST00000388835 SDHAF1A6NFY7 115 aa16.34■□□□□ 0.21
KRT18-201ENST00000388835 OXTP01178 125 aa16.34■□□□□ 0.21
KRT18-201ENST00000388835 APCSP02743 223 aa16.34■□□□□ 0.21
KRT18-201ENST00000388835 HNRNPA3P51991 378 aaKnown RBP16.34■□□□□ 0.21
KRT18-201ENST00000388835 NCR2O95944 276 aa16.34■□□□□ 0.21
KRT18-201ENST00000388835 TEX261Q6UWH6 196 aa16.34■□□□□ 0.21
KRT18-201ENST00000388835 CHTF8P0CG12 524 aa16.33■□□□□ 0.2
KRT18-201ENST00000388835 C15orf56Q8N910 161 aa16.33■□□□□ 0.2
KRT18-201ENST00000388835 LYPD6BQ8NI32 183 aa16.33■□□□□ 0.2
KRT18-201ENST00000388835 EIF5A2Q9GZV4 153 aaKnown RBP16.32■□□□□ 0.2
KRT18-201ENST00000388835 FGF6P10767 208 aa16.31■□□□□ 0.2
KRT18-201ENST00000388835 PMCHP20382 165 aa16.31■□□□□ 0.2
KRT18-201ENST00000388835 HIGD2BQ4VC39 106 aa16.31■□□□□ 0.2
KRT18-201ENST00000388835 CFAP161Q6P656 301 aa16.31■□□□□ 0.2
KRT18-201ENST00000388835 CHCHD10Q8WYQ3 142 aaPredicted RBP16.31■□□□□ 0.2
KRT18-201ENST00000388835 BORCS7Q96B45 105 aa16.31■□□□□ 0.2
KRT18-201ENST00000388835 FAT3Q8TDW7 4589 aa16.31■□□□□ 0.2
KRT18-201ENST00000388835 CIRBPQ14011 172 aaKnown RBP16.3■□□□□ 0.2
KRT18-201ENST00000388835 SMIM7Q9BQ49 75 aa16.3■□□□□ 0.2
KRT18-201ENST00000388835 GAS8-AS1O95177 125 aa16.3■□□□□ 0.2
KRT18-201ENST00000388835 CT83Q5H943 113 aa16.3■□□□□ 0.2
KRT18-201ENST00000388835 PKHD1L1Q86WI1 4243 aa16.29■□□□□ 0.2
KRT18-201ENST00000388835 H7C423 109 aa16.29■□□□□ 0.2
KRT18-201ENST00000388835 I3L3M4 83 aa16.29■□□□□ 0.2
KRT18-201ENST00000388835 A0A087WYN8 130 aa16.27■□□□□ 0.2
KRT18-201ENST00000388835 LINC01551Q86U37 167 aa16.27■□□□□ 0.2
KRT18-201ENST00000388835 FAM231BA6NCW3 169 aa16.26■□□□□ 0.19
KRT18-201ENST00000388835 HIGD1CA8MV81 97 aa16.26■□□□□ 0.19
KRT18-201ENST00000388835 SPACA4Q8TDM5 124 aa16.26■□□□□ 0.19
KRT18-201ENST00000388835 ST20Q9HBF5 79 aa16.26■□□□□ 0.19
KRT18-201ENST00000388835 TRBV6-5A0A0K0K1A5 114 aa16.26■□□□□ 0.19
KRT18-201ENST00000388835 A0A1B0GUT8 65 aa16.26■□□□□ 0.19
KRT18-201ENST00000388835 TSKUQ8WUA8 353 aa16.26■□□□□ 0.19
KRT18-201ENST00000388835 TMEM242Q9NWH2 141 aa16.26■□□□□ 0.19
KRT18-201ENST00000388835 ZNF727A8MUV8 499 aa16.25■□□□□ 0.19
KRT18-201ENST00000388835 RPS10P46783 165 aaKnown RBP16.25■□□□□ 0.19
KRT18-201ENST00000388835 TMEM101Q96IK0 257 aa16.25■□□□□ 0.19
KRT18-201ENST00000388835 BTF3L4Q96K17 158 aa16.25■□□□□ 0.19
KRT18-201ENST00000388835 TSHBP01222 138 aa16.24■□□□□ 0.19
KRT18-201ENST00000388835 COX6A2Q02221 97 aa16.24■□□□□ 0.19
KRT18-201ENST00000388835 SERTAD4-AS1Q5TG53 156 aa16.24■□□□□ 0.19
KRT18-201ENST00000388835 RNF185Q96GF1 192 aa16.24■□□□□ 0.19
KRT18-201ENST00000388835 FAM210AQ96ND0 272 aa16.24■□□□□ 0.19
KRT18-201ENST00000388835 ZNF25P17030 456 aaPredicted RBP16.23■□□□□ 0.19
KRT18-201ENST00000388835 OR5A1Q8NGJ0 315 aa16.23■□□□□ 0.19
KRT18-201ENST00000388835 TMEM191AQ9H0A3 160 aa16.23■□□□□ 0.19
KRT18-201ENST00000388835 XCL1P47992 114 aa16.22■□□□□ 0.19
KRT18-201ENST00000388835 FOXI1Q12951 378 aa16.22■□□□□ 0.19
KRT18-201ENST00000388835 OSTCQ9NRP0 149 aa16.22■□□□□ 0.19
KRT18-201ENST00000388835 SRP19P09132 144 aaKnown RBP16.21■□□□□ 0.19
KRT18-201ENST00000388835 ESDP10768 282 aa16.21■□□□□ 0.18
KRT18-201ENST00000388835 RAB4AP20338 218 aa16.21■□□□□ 0.18
KRT18-201ENST00000388835 AMN1Q8IY45 258 aa16.21■□□□□ 0.18
KRT18-201ENST00000388835 PRSS3P2Q8NHM4 247 aa16.21■□□□□ 0.18
KRT18-201ENST00000388835 MRAP2Q96G30 205 aa16.21■□□□□ 0.18
KRT18-201ENST00000388835 GVQW2A0A096LPI5 108 aaPredicted RBP16.2■□□□□ 0.18
KRT18-201ENST00000388835 IGKV2-24A0A0C4DH68 120 aa16.2■□□□□ 0.18
KRT18-201ENST00000388835 LINC00959A0A1B0GUT2 108 aa16.19■□□□□ 0.18
KRT18-201ENST00000388835 CCL25O15444 150 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms