RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 HEATR5AQ86XA9 2040 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 NCR3O14931 201 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 DEFB4AO15263 64 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 CACNA1AO00555 2505 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 NOTCH4Q99466 2003 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 A0A087WZ39 114 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 LECT2O14960 151 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 CD164L2Q6UWJ8 174 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.37□□□□□ -1.55
CCDC171-201ENST00000380701 C11orf1Q9H5F2 150 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 TIMM17BO60830 172 aa5.36□□□□□ -1.55
CCDC171-201ENST00000380701 TEN1Q86WV5 123 aa5.36□□□□□ -1.55
CCDC171-201ENST00000380701 IGHV4-28A0A0C4DH34 117 aa5.36□□□□□ -1.55
CCDC171-201ENST00000380701 NCKAP5O14513 1909 aa5.36□□□□□ -1.55
CCDC171-201ENST00000380701 RPL39P62891 51 aaKnown RBP5.36□□□□□ -1.55
CCDC171-201ENST00000380701 FAM19A1Q7Z5A9 133 aa5.36□□□□□ -1.55
CCDC171-201ENST00000380701 DENND4AQ7Z401 1863 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 IGKV2-24A0A0C4DH68 120 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 A0A1B0GXF2 115 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 Q6ZUT4 128 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 PLXND1Q9Y4D7 1925 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 ODF1Q14990 250 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 HIGD2AQ9BW72 106 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 DOCK9Q9BZ29 2069 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 IGHV4-4A0A075B6R2 117 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 H3BMG7 143 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
CCDC171-201ENST00000380701 CFAP126Q5VTH2 177 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 EIF4EBP1Q13541 118 aaPredicted RBP5.35□□□□□ -1.55
CCDC171-201ENST00000380701 COX17Q14061 63 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 E7EUB6 86 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 PCP2Q8IVA1 136 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 MED13Q9UHV7 2174 aa5.35□□□□□ -1.55
CCDC171-201ENST00000380701 KPRPQ5T749 579 aaPredicted RBP5.34□□□□□ -1.55
CCDC171-201ENST00000380701 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.55
CCDC171-201ENST00000380701 MLST8Q9BVC4 326 aa5.34□□□□□ -1.55
CCDC171-201ENST00000380701 EML6Q6ZMW3 1958 aa5.34□□□□□ -1.55
CCDC171-201ENST00000380701 BDP1A6H8Y1 2624 aa5.34□□□□□ -1.55
CCDC171-201ENST00000380701 H0Y9J4 135 aa5.34□□□□□ -1.55
CCDC171-201ENST00000380701 M0R378 163 aa5.34□□□□□ -1.55
CCDC171-201ENST00000380701 TRBV27A0A0K0K1C4 114 aa5.34□□□□□ -1.56
CCDC171-201ENST00000380701 BPY2O14599 106 aa5.34□□□□□ -1.56
CCDC171-201ENST00000380701 TCL1BO95988 128 aa5.34□□□□□ -1.56
CCDC171-201ENST00000380701 FSHBP01225 129 aa5.34□□□□□ -1.56
CCDC171-201ENST00000380701 KLLNB2CW77 178 aa5.33□□□□□ -1.56
CCDC171-201ENST00000380701 M0QY20 66 aa5.33□□□□□ -1.56
CCDC171-201ENST00000380701 ANKRD39Q53RE8 183 aa5.32□□□□□ -1.56
CCDC171-201ENST00000380701 K7ERJ3 54 aa5.32□□□□□ -1.56
CCDC171-201ENST00000380701 RBX1P62877 108 aa5.32□□□□□ -1.56
CCDC171-201ENST00000380701 K7ERS5 55 aa5.32□□□□□ -1.56
CCDC171-201ENST00000380701 CASC2Q6XLA1 102 aa5.32□□□□□ -1.56
CCDC171-201ENST00000380701 LINC00643Q86TS7 51 aa5.32□□□□□ -1.56
CCDC171-201ENST00000380701 IGLV1-51P01701 117 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 RPL28P46779 137 aaKnown RBP5.31□□□□□ -1.56
CCDC171-201ENST00000380701 WFDC9Q8NEX5 89 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 OTOGLQ3ZCN5 2332 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 NAV2Q8IVL1 2488 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 IGLV4-3A0A075B6K6 122 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 LINC00467Q9BRT7 94 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 C9orf85Q96MD7 179 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 IGKV2D-26A0A0A0MRZ7 120 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 WISP2O76076 250 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 CDPF1Q6NVV7 123 aa5.31□□□□□ -1.56
CCDC171-201ENST00000380701 ATRXP46100 2492 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 TRBV30A0A0K0K1B3 111 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 NAV3Q8IVL0 2385 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 ZNF80P51504 273 aaPredicted RBP5.3□□□□□ -1.56
CCDC171-201ENST00000380701 DOCK11Q5JSL3 2073 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 TMEM223A0PJW6 202 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 G3V4G9 280 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 LY6G6CO95867 125 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 IGHV4-30-4P0DP06 118 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 EGFEM1PQ0D2K5 195 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 PTH2Q96A98 100 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 U3KQK5 164 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 ZNF22P17026 224 aaPredicted RBP5.3□□□□□ -1.56
CCDC171-201ENST00000380701 SPTSSBQ8NFR3 76 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 C14orf132Q9NPU4 83 aa5.3□□□□□ -1.56
CCDC171-201ENST00000380701 COL4A4P53420 1690 aaPredicted RBP5.3□□□□□ -1.56
CCDC171-201ENST00000380701 BRWD1-AS2P59051 145 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 Q8IZM0 81 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 BBC3Q96PG8 261 aaPredicted RBP5.29□□□□□ -1.56
CCDC171-201ENST00000380701 MED13LQ71F56 2210 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 C20orf173Q96LM9 149 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 TRAV23DV6A0A075B6W5 121 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 ASPHD1Q5U4P2 390 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 UBE2D4Q9Y2X8 147 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 USP17L23D6RBM5 183 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 IGKV4-1P06312 121 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 NACAE9PAV3 2078 aa5.29□□□□□ -1.56
CCDC171-201ENST00000380701 NDUFC2O95298 119 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 IGLV2-8P01709 118 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 C22orf34Q6ZV56 151 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 TNRC6AQ8NDV7 1962 aaKnown RBP5.28□□□□□ -1.56
CCDC171-201ENST00000380701 SPG11Q96JI7 2443 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 TP53TG3Q9ULZ0 132 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 UBE2D3P61077 147 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 UBE2D2P62837 147 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms