RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 GATD1Q8NB37 220 aa16.12■□□□□ 0.17
TNFRSF4-201ENST00000379236 FAM210AQ96ND0 272 aa16.12■□□□□ 0.17
TNFRSF4-201ENST00000379236 ZNF727A8MUV8 499 aa16.11■□□□□ 0.17
TNFRSF4-201ENST00000379236 CT83Q5H943 113 aa16.11■□□□□ 0.17
TNFRSF4-201ENST00000379236 TEX261Q6UWH6 196 aa16.11■□□□□ 0.17
TNFRSF4-201ENST00000379236 IGLV10-54A0A075B6I4 117 aa16.1■□□□□ 0.17
TNFRSF4-201ENST00000379236 A0A1B0GUV1 79 aa16.1■□□□□ 0.17
TNFRSF4-201ENST00000379236 SRRM2Q9UQ35 2752 aaKnown RBP16.09■□□□□ 0.17
TNFRSF4-201ENST00000379236 TRAV8-4A0A0B4J246 113 aa16.09■□□□□ 0.17
TNFRSF4-201ENST00000379236 NDUFS6O75380 124 aaKnown RBP16.09■□□□□ 0.17
TNFRSF4-201ENST00000379236 PLA2G1BP04054 148 aaKnown RBP16.09■□□□□ 0.17
TNFRSF4-201ENST00000379236 C20orf203Q8NBC4 194 aa16.09■□□□□ 0.17
TNFRSF4-201ENST00000379236 LINC00528Q8N1L1 170 aa16.08■□□□□ 0.16
TNFRSF4-201ENST00000379236 RPL39LQ96EH5 51 aaKnown RBP16.08■□□□□ 0.16
TNFRSF4-201ENST00000379236 IGLV4-60A0A075B6I1 120 aa16.07■□□□□ 0.16
TNFRSF4-201ENST00000379236 A0A1B0GVG6 124 aa16.07■□□□□ 0.16
TNFRSF4-201ENST00000379236 SCXQ7RTU7 201 aa16.07■□□□□ 0.16
TNFRSF4-201ENST00000379236 LINC01551Q86U37 167 aa16.07■□□□□ 0.16
TNFRSF4-201ENST00000379236 SRP19P09132 144 aaKnown RBP16.06■□□□□ 0.16
TNFRSF4-201ENST00000379236 FOXA3P55318 350 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF4-201ENST00000379236 NCR2O95944 276 aa16.05■□□□□ 0.16
TNFRSF4-201ENST00000379236 APCSP02743 223 aa16.05■□□□□ 0.16
TNFRSF4-201ENST00000379236 PRSS1P07477 247 aa16.05■□□□□ 0.16
TNFRSF4-201ENST00000379236 AMMECR1LQ6DCA0 310 aa16.05■□□□□ 0.16
TNFRSF4-201ENST00000379236 TSKUQ8WUA8 353 aa16.05■□□□□ 0.16
TNFRSF4-201ENST00000379236 CHAC1Q9BUX1 264 aa16.05■□□□□ 0.16
TNFRSF4-201ENST00000379236 A0A1B0GUT8 65 aa16.04■□□□□ 0.16
TNFRSF4-201ENST00000379236 HIGD1CA8MV81 97 aa16.04■□□□□ 0.16
TNFRSF4-201ENST00000379236 DGAT2L7PQ6IED9 249 aa16.04■□□□□ 0.16
TNFRSF4-201ENST00000379236 GFRA4Q9GZZ7 299 aa16.04■□□□□ 0.16
TNFRSF4-201ENST00000379236 OSTCQ9NRP0 149 aa16.04■□□□□ 0.16
TNFRSF4-201ENST00000379236 SDHAF1A6NFY7 115 aa16.03■□□□□ 0.16
TNFRSF4-201ENST00000379236 KRTAP26-1Q6PEX3 210 aa16.03■□□□□ 0.16
TNFRSF4-201ENST00000379236 CLRN3Q8NCR9 226 aa16.03■□□□□ 0.16
TNFRSF4-201ENST00000379236 PMCHP20382 165 aa16.02■□□□□ 0.16
TNFRSF4-201ENST00000379236 RNASEKQ6P5S7 137 aaKnown RBP16.02■□□□□ 0.16
TNFRSF4-201ENST00000379236 IGKV3OR2-268A0A0C4DH90 116 aa16.01■□□□□ 0.15
TNFRSF4-201ENST00000379236 FAM231BA6NCW3 169 aa16.01■□□□□ 0.15
TNFRSF4-201ENST00000379236 hDV102S1A0JD36 115 aa16■□□□□ 0.15
TNFRSF4-201ENST00000379236 FAM74A3Q4VXF1 159 aa16■□□□□ 0.15
TNFRSF4-201ENST00000379236 AP5S1Q9NUS5 200 aa16■□□□□ 0.15
TNFRSF4-201ENST00000379236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF4-201ENST00000379236 IGKV2-29A2NJV5 120 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF4-201ENST00000379236 H7C423 109 aa15.99■□□□□ 0.15
TNFRSF4-201ENST00000379236 I3L3M4 83 aa15.99■□□□□ 0.15
TNFRSF4-201ENST00000379236 TMEM241Q24JQ0 296 aa15.99■□□□□ 0.15
TNFRSF4-201ENST00000379236 CIRBP-AS1Q8TBR5 109 aa15.99■□□□□ 0.15
TNFRSF4-201ENST00000379236 TMEM191AQ9H0A3 160 aa15.99■□□□□ 0.15
TNFRSF4-201ENST00000379236 ST20Q9HBF5 79 aa15.99■□□□□ 0.15
TNFRSF4-201ENST00000379236 RIGQ13278 110 aa15.98■□□□□ 0.15
TNFRSF4-201ENST00000379236 C9orf163Q8N9P6 203 aa15.97■□□□□ 0.15
TNFRSF4-201ENST00000379236 BTF3L4Q96K17 158 aa15.97■□□□□ 0.15
TNFRSF4-201ENST00000379236 TRBV6-5A0A0K0K1A5 114 aa15.96■□□□□ 0.15
TNFRSF4-201ENST00000379236 ADIRFQ15847 76 aa15.96■□□□□ 0.15
TNFRSF4-201ENST00000379236 ISOC2Q96AB3 205 aa15.96■□□□□ 0.15
TNFRSF4-201ENST00000379236 MRAP2Q96G30 205 aa15.96■□□□□ 0.15
TNFRSF4-201ENST00000379236 TMEM101Q96IK0 257 aa15.96■□□□□ 0.15
TNFRSF4-201ENST00000379236 FLG2Q5D862 2391 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF4-201ENST00000379236 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF4-201ENST00000379236 GAGE12HA6NDE8 117 aa15.95■□□□□ 0.14
TNFRSF4-201ENST00000379236 FGF6P10767 208 aa15.95■□□□□ 0.14
TNFRSF4-201ENST00000379236 PEA15Q15121 130 aa15.95■□□□□ 0.14
TNFRSF4-201ENST00000379236 NAT8Q9UHE5 227 aa15.95■□□□□ 0.14
TNFRSF4-201ENST00000379236 V9GYV3 84 aa15.95■□□□□ 0.14
TNFRSF4-201ENST00000379236 MYCBP2O75592 4640 aa15.94■□□□□ 0.14
TNFRSF4-201ENST00000379236 DMBT1Q9UGM3 2413 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF4-201ENST00000379236 ZNF25P17030 456 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF4-201ENST00000379236 RPL23P62829 140 aaKnown RBP15.94■□□□□ 0.14
TNFRSF4-201ENST00000379236 CFAP161Q6P656 301 aa15.94■□□□□ 0.14
TNFRSF4-201ENST00000379236 NAT8BQ9UHF3 227 aa15.94■□□□□ 0.14
TNFRSF4-201ENST00000379236 RAB4AP20338 218 aa15.93■□□□□ 0.14
TNFRSF4-201ENST00000379236 AMN1Q8IY45 258 aa15.93■□□□□ 0.14
TNFRSF4-201ENST00000379236 NUP35Q8NFH5 326 aa15.93■□□□□ 0.14
TNFRSF4-201ENST00000379236 TMEM242Q9NWH2 141 aa15.93■□□□□ 0.14
TNFRSF4-201ENST00000379236 CNBPP62633 177 aaKnown RBP15.92■□□□□ 0.14
TNFRSF4-201ENST00000379236 RNF185Q96GF1 192 aa15.91■□□□□ 0.14
TNFRSF4-201ENST00000379236 IGHV3-64A0A075B6Q5 118 aa15.9■□□□□ 0.14
TNFRSF4-201ENST00000379236 GAS8-AS1O95177 125 aa15.9■□□□□ 0.14
TNFRSF4-201ENST00000379236 PPP1R17O96001 155 aa15.9■□□□□ 0.14
TNFRSF4-201ENST00000379236 CHCHD10Q8WYQ3 142 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF4-201ENST00000379236 J3QL48 77 aa15.89■□□□□ 0.13
TNFRSF4-201ENST00000379236 TSHBP01222 138 aa15.89■□□□□ 0.13
TNFRSF4-201ENST00000379236 OR5A1Q8NGJ0 315 aa15.89■□□□□ 0.13
TNFRSF4-201ENST00000379236 SMDT1Q9H4I9 107 aa15.89■□□□□ 0.13
TNFRSF4-201ENST00000379236 HERC1Q15751 4861 aa15.88■□□□□ 0.13
TNFRSF4-201ENST00000379236 FCER1GP30273 86 aa15.88■□□□□ 0.13
TNFRSF4-201ENST00000379236 RPS10P46783 165 aaKnown RBP15.88■□□□□ 0.13
TNFRSF4-201ENST00000379236 SMKR1H3BMG3 65 aa15.87■□□□□ 0.13
TNFRSF4-201ENST00000379236 TRBV27A0A0K0K1C4 114 aa15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 C7orf77A4D0Y5 90 aa15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 C9JQL5 133 aa15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 ESDP10768 282 aa15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 POLR2KP53803 58 aaKnown RBP15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 SRSF3P84103 164 aaKnown RBP15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 SDIM1Q6ZPB5 146 aa15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 DPH3Q96FX2 82 aa15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF4-201ENST00000379236 VCYO14598 125 aa15.85■□□□□ 0.13
TNFRSF4-201ENST00000379236 CAMPP49913 170 aa15.85■□□□□ 0.13
TNFRSF4-201ENST00000379236 C15orf56Q8N910 161 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms