RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 DEFA6Q01524 100 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 ANKRD39Q53RE8 183 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 DPM2O94777 84 aa12.3□□□□□ -0.44
THUMPD2-201ENST00000378727 IGKCP01834 107 aa12.3□□□□□ -0.44
THUMPD2-201ENST00000378727 FHL2Q14192 279 aa12.3□□□□□ -0.44
THUMPD2-201ENST00000378727 TMEM141Q96I45 108 aa12.3□□□□□ -0.44
THUMPD2-201ENST00000378727 TP73-AS1Q9UF72 201 aa12.3□□□□□ -0.44
THUMPD2-201ENST00000378727 G3V4G9 280 aa12.3□□□□□ -0.44
THUMPD2-201ENST00000378727 RNF183Q96D59 192 aa12.3□□□□□ -0.44
THUMPD2-201ENST00000378727 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
THUMPD2-201ENST00000378727 IGHV4-28A0A0C4DH34 117 aa12.29□□□□□ -0.44
THUMPD2-201ENST00000378727 PRSS29PA6NIE9 313 aa12.29□□□□□ -0.44
THUMPD2-201ENST00000378727 DEFB4AO15263 64 aa12.29□□□□□ -0.44
THUMPD2-201ENST00000378727 ZC2HC1BQ5TFG8 222 aa12.29□□□□□ -0.44
THUMPD2-201ENST00000378727 TRGV4A0A0C4DH28 118 aa12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 TRBV6-4A0A1B0GX49 114 aa12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 F8VRH5 84 aa12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 RPL36AP83881 106 aaKnown RBP12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 Q8NAQ8 132 aa12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 RPL36ALQ969Q0 106 aaKnown RBP12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 CHTOPQ9Y3Y2 248 aaKnown RBP12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 UBE2D3P61077 147 aa12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 UBE2D2P62837 147 aa12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 COTL1Q14019 142 aa12.28□□□□□ -0.44
THUMPD2-201ENST00000378727 LOC100131303A0A0U1RQF7 123 aa12.27□□□□□ -0.45
THUMPD2-201ENST00000378727 GAGE12JA6NER3 117 aa12.27□□□□□ -0.45
THUMPD2-201ENST00000378727 A8MZ25 164 aa12.27□□□□□ -0.45
THUMPD2-201ENST00000378727 TCTAP57738 103 aa12.27□□□□□ -0.45
THUMPD2-201ENST00000378727 GAGE1Q13065 139 aa12.27□□□□□ -0.45
THUMPD2-201ENST00000378727 GAGE4Q13068 117 aa12.27□□□□□ -0.45
THUMPD2-201ENST00000378727 GAGE5Q13069 117 aa12.27□□□□□ -0.45
THUMPD2-201ENST00000378727 GAGE13Q4V321 117 aa12.27□□□□□ -0.45
THUMPD2-201ENST00000378727 LYRM9A8MSI8 78 aa12.26□□□□□ -0.45
THUMPD2-201ENST00000378727 MIFP14174 115 aa12.26□□□□□ -0.45
THUMPD2-201ENST00000378727 PLNP26678 52 aa12.26□□□□□ -0.45
THUMPD2-201ENST00000378727 PMVKQ15126 192 aa12.26□□□□□ -0.45
THUMPD2-201ENST00000378727 FAM104AQ969W3 186 aa12.26□□□□□ -0.45
THUMPD2-201ENST00000378727 CST9LQ9H4G1 147 aa12.26□□□□□ -0.45
THUMPD2-201ENST00000378727 ZMAT5Q9UDW3 170 aaKnown RBP12.26□□□□□ -0.45
THUMPD2-201ENST00000378727 SAMD5Q5TGI4 173 aa12.25□□□□□ -0.45
THUMPD2-201ENST00000378727 DAZ4Q86SG3 579 aaKnown RBP12.25□□□□□ -0.45
THUMPD2-201ENST00000378727 DAZ3Q9NR90 486 aaKnown RBP12.25□□□□□ -0.45
THUMPD2-201ENST00000378727 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
THUMPD2-201ENST00000378727 IGLV4-3A0A075B6K6 122 aa12.24□□□□□ -0.45
THUMPD2-201ENST00000378727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.24□□□□□ -0.45
THUMPD2-201ENST00000378727 IGKV2-29A2NJV5 120 aaPredicted RBP12.24□□□□□ -0.45
THUMPD2-201ENST00000378727 COX8AP10176 69 aa12.24□□□□□ -0.45
THUMPD2-201ENST00000378727 CEMP1Q6PRD7 247 aaPredicted RBP12.24□□□□□ -0.45
THUMPD2-201ENST00000378727 NTM-AS1Q6ZSK4 140 aa12.24□□□□□ -0.45
THUMPD2-201ENST00000378727 IGLV4-69A0A075B6H9 119 aa12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 SLC25A34Q6PIV7 304 aa12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 ANK2Q01484 3957 aa12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 DNAH3Q8TD57 4116 aa12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 IGKV2D-26A0A0A0MRZ7 120 aa12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 CTAG1AP78358 180 aa12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 CELA1Q9UNI1 258 aa12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
THUMPD2-201ENST00000378727 FGF6P10767 208 aa12.22□□□□□ -0.45
THUMPD2-201ENST00000378727 LINC00694P0DN24 101 aa12.22□□□□□ -0.45
THUMPD2-201ENST00000378727 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
THUMPD2-201ENST00000378727 MDFIQ99750 246 aa12.21□□□□□ -0.45
THUMPD2-201ENST00000378727 SNHG12Q9BXW3 62 aa12.21□□□□□ -0.45
THUMPD2-201ENST00000378727 EREGO14944 169 aa12.2□□□□□ -0.46
THUMPD2-201ENST00000378727 RETNQ9HD89 108 aa12.2□□□□□ -0.46
THUMPD2-201ENST00000378727 SPANXA1Q9NS26 97 aa12.2□□□□□ -0.46
THUMPD2-201ENST00000378727 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
THUMPD2-201ENST00000378727 NMUP48645 174 aa12.2□□□□□ -0.46
THUMPD2-201ENST00000378727 CRYBA4P53673 196 aa12.2□□□□□ -0.46
THUMPD2-201ENST00000378727 PCP2Q8IVA1 136 aa12.2□□□□□ -0.46
THUMPD2-201ENST00000378727 MRPS16Q9Y3D3 137 aaKnown RBP12.2□□□□□ -0.46
THUMPD2-201ENST00000378727 SBSPONQ8IVN8 264 aa12.19□□□□□ -0.46
THUMPD2-201ENST00000378727 AMELXQ99217 191 aa12.19□□□□□ -0.46
THUMPD2-201ENST00000378727 VCX2Q9H322 139 aa12.19□□□□□ -0.46
THUMPD2-201ENST00000378727 NPSP0C0P6 89 aa12.18□□□□□ -0.46
THUMPD2-201ENST00000378727 BOD1L2Q8IYS8 172 aa12.18□□□□□ -0.46
THUMPD2-201ENST00000378727 GTSF1LQ9H1H1 148 aa12.18□□□□□ -0.46
THUMPD2-201ENST00000378727 NOTCH1P46531 2555 aa12.18□□□□□ -0.46
THUMPD2-201ENST00000378727 DAD1P61803 113 aa12.18□□□□□ -0.46
THUMPD2-201ENST00000378727 RNASE13Q5GAN3 156 aaKnown RBP12.18□□□□□ -0.46
THUMPD2-201ENST00000378727 SPART-AS1P0CW21 52 aa12.17□□□□□ -0.46
THUMPD2-201ENST00000378727 PAPPA-AS1Q5QFB9 102 aa12.17□□□□□ -0.46
THUMPD2-201ENST00000378727 TTTY13Q9BZ97 58 aa12.17□□□□□ -0.46
THUMPD2-201ENST00000378727 PRO0255Q9UI72 69 aa12.17□□□□□ -0.46
THUMPD2-201ENST00000378727 M0R143 59 aa12.17□□□□□ -0.46
THUMPD2-201ENST00000378727 Q6ZUT4 128 aa12.17□□□□□ -0.46
THUMPD2-201ENST00000378727 C2orf91Q6ZV80 131 aa12.17□□□□□ -0.46
THUMPD2-201ENST00000378727 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
THUMPD2-201ENST00000378727 GYPEP15421 78 aa12.16□□□□□ -0.46
THUMPD2-201ENST00000378727 MRPL52Q86TS9 123 aaKnown RBP12.16□□□□□ -0.46
THUMPD2-201ENST00000378727 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
THUMPD2-201ENST00000378727 DLEU1O43261 78 aa12.15□□□□□ -0.46
THUMPD2-201ENST00000378727 PRB2P02812 416 aaPredicted RBP12.15□□□□□ -0.46
THUMPD2-201ENST00000378727 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
THUMPD2-201ENST00000378727 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
THUMPD2-201ENST00000378727 ATP5G1P05496 136 aa12.14□□□□□ -0.47
THUMPD2-201ENST00000378727 VSIG2Q96IQ7 327 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms