RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 FOXI1Q12951 378 aa14.23□□□□□ -0.13
SHROOM1-202ENST00000378676 Q6ZSN1 163 aa14.23□□□□□ -0.13
SHROOM1-202ENST00000378676 C1QTNF4Q9BXJ3 329 aa14.23□□□□□ -0.13
SHROOM1-202ENST00000378676 CFC1BP0CG36 223 aa14.23□□□□□ -0.13
SHROOM1-202ENST00000378676 CFC1P0CG37 223 aa14.23□□□□□ -0.13
SHROOM1-202ENST00000378676 CEMP1Q6PRD7 247 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-202ENST00000378676 DLX4Q92988 240 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-202ENST00000378676 CD28P10747 220 aa14.22□□□□□ -0.13
SHROOM1-202ENST00000378676 DEFB113Q30KQ7 82 aa14.22□□□□□ -0.13
SHROOM1-202ENST00000378676 VCX2Q9H322 139 aa14.22□□□□□ -0.13
SHROOM1-202ENST00000378676 TENM4Q6N022 2769 aa14.22□□□□□ -0.13
SHROOM1-202ENST00000378676 LOC107984156A0A0G2JMH3 177 aa14.22□□□□□ -0.13
SHROOM1-202ENST00000378676 M0R2P5 195 aa14.22□□□□□ -0.13
SHROOM1-202ENST00000378676 ARL17AQ8IVW1 177 aa14.22□□□□□ -0.13
SHROOM1-202ENST00000378676 C4orf3Q8WVX3 66 aa14.22□□□□□ -0.13
SHROOM1-202ENST00000378676 UBE2D3P61077 147 aa14.21□□□□□ -0.13
SHROOM1-202ENST00000378676 UBE2D2P62837 147 aa14.21□□□□□ -0.13
SHROOM1-202ENST00000378676 Q96MF0 132 aa14.21□□□□□ -0.13
SHROOM1-202ENST00000378676 CDIP1Q9H305 208 aa14.21□□□□□ -0.13
SHROOM1-202ENST00000378676 PEMTQ9UBM1 199 aa14.21□□□□□ -0.13
SHROOM1-202ENST00000378676 ZNF415Q09FC8 603 aa14.2□□□□□ -0.14
SHROOM1-202ENST00000378676 TLN2Q9Y4G6 2542 aa14.2□□□□□ -0.14
SHROOM1-202ENST00000378676 ZNF469Q96JG9 3925 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-202ENST00000378676 TRAV2A0A0B4J234 112 aa14.2□□□□□ -0.14
SHROOM1-202ENST00000378676 SMCPP49901 116 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-202ENST00000378676 RNASE13Q5GAN3 156 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-202ENST00000378676 A8MWV9 139 aa14.19□□□□□ -0.14
SHROOM1-202ENST00000378676 PSMB2P49721 201 aa14.19□□□□□ -0.14
SHROOM1-202ENST00000378676 DYNLRB2Q8TF09 96 aa14.19□□□□□ -0.14
SHROOM1-202ENST00000378676 EIF4EBP3O60516 100 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-202ENST00000378676 CFAP126Q5VTH2 177 aa14.19□□□□□ -0.14
SHROOM1-202ENST00000378676 C11orf72Q8NBR9 251 aa14.19□□□□□ -0.14
SHROOM1-202ENST00000378676 TNFRSF18Q9Y5U5 241 aa14.19□□□□□ -0.14
SHROOM1-202ENST00000378676 SPINK8P0C7L1 97 aa14.18□□□□□ -0.14
SHROOM1-202ENST00000378676 PYGO1Q9Y3Y4 419 aa14.18□□□□□ -0.14
SHROOM1-202ENST00000378676 KRTAP1-3Q8IUG1 177 aa14.18□□□□□ -0.14
SHROOM1-202ENST00000378676 C10orf126Q8N4M7 172 aa14.18□□□□□ -0.14
SHROOM1-202ENST00000378676 DEFB114Q30KQ6 69 aa14.17□□□□□ -0.14
SHROOM1-202ENST00000378676 CHCHD7Q9BUK0 85 aa14.17□□□□□ -0.14
SHROOM1-202ENST00000378676 LINC01587Q99440 93 aa14.16□□□□□ -0.14
SHROOM1-202ENST00000378676 APCP25054 2843 aa14.16□□□□□ -0.14
SHROOM1-202ENST00000378676 ITPR3Q14573 2671 aa14.16□□□□□ -0.14
SHROOM1-202ENST00000378676 A4D1N5 150 aa14.16□□□□□ -0.14
SHROOM1-202ENST00000378676 LRRC75A-AS1Q8N1F1 130 aa14.16□□□□□ -0.14
SHROOM1-202ENST00000378676 SPXQ9BT56 116 aa14.16□□□□□ -0.14
SHROOM1-202ENST00000378676 WNK1Q9H4A3 2382 aa14.16□□□□□ -0.14
SHROOM1-202ENST00000378676 MRPS36P82909 103 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 TRAV8-3A0A0A6YYJ7 113 aa14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 IGKV2-29A2NJV5 120 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 ADARB2-AS1A8MUL3 147 aa14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 TCL1BO95988 128 aa14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 IGHV3-30-3P0DP02 117 aa14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 Q6ZUT4 128 aa14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 RAX2Q96IS3 184 aa14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 HELZ2Q9BYK8 2649 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-202ENST00000378676 IGHV3-38A0A0C4DH36 116 aa14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 PIK3CD-AS1Q5SR53 167 aa14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 PRO1854Q9UHT4 67 aa14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 SONP18583 2426 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 INSP01308 110 aa14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 PTH2Q96A98 100 aa14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 TIMM21Q9BVV7 248 aa14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 ERG28Q9UKR5 140 aa14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 UBE2D4Q9Y2X8 147 aa14.14□□□□□ -0.15
SHROOM1-202ENST00000378676 A0A0J9YXY3 114 aa14.13□□□□□ -0.15
SHROOM1-202ENST00000378676 MT-ATP8P03928 68 aa14.13□□□□□ -0.15
SHROOM1-202ENST00000378676 Q6ZSV7 163 aa14.13□□□□□ -0.15
SHROOM1-202ENST00000378676 MUSTN1Q8IVN3 82 aa14.13□□□□□ -0.15
SHROOM1-202ENST00000378676 ODF3L2Q3SX64 289 aa14.12□□□□□ -0.15
SHROOM1-202ENST00000378676 LINC00467Q9BRT7 94 aa14.12□□□□□ -0.15
SHROOM1-202ENST00000378676 PPDPFLQ8WWR9 84 aa14.12□□□□□ -0.15
SHROOM1-202ENST00000378676 NBPF19A0A087WUL8 3843 aa14.12□□□□□ -0.15
SHROOM1-202ENST00000378676 IGHV3-53P01767 116 aa14.11□□□□□ -0.15
SHROOM1-202ENST00000378676 LYRM7Q5U5X0 104 aa14.11□□□□□ -0.15
SHROOM1-202ENST00000378676 TMEM263Q8WUH6 116 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-202ENST00000378676 XGP55808 180 aa14.11□□□□□ -0.15
SHROOM1-202ENST00000378676 BEAN1Q3B7T3 259 aa14.11□□□□□ -0.15
SHROOM1-202ENST00000378676 XCL2Q9UBD3 114 aa14.11□□□□□ -0.15
SHROOM1-202ENST00000378676 C11orf44Q8N8P7 122 aa14.1□□□□□ -0.15
SHROOM1-202ENST00000378676 RS1O15537 224 aa14.1□□□□□ -0.15
SHROOM1-202ENST00000378676 LITAFQ99732 161 aa14.1□□□□□ -0.15
SHROOM1-202ENST00000378676 A8MZ25 164 aa14.09□□□□□ -0.15
SHROOM1-202ENST00000378676 IGHV3-33P01772 117 aa14.09□□□□□ -0.15
SHROOM1-202ENST00000378676 FHL3Q13643 280 aa14.09□□□□□ -0.15
SHROOM1-202ENST00000378676 SPANXA1Q9NS26 97 aa14.09□□□□□ -0.15
SHROOM1-202ENST00000378676 NF1P21359 2839 aa14.09□□□□□ -0.15
SHROOM1-202ENST00000378676 A0A1W2PRX2 142 aa14.09□□□□□ -0.15
SHROOM1-202ENST00000378676 TEN1Q86WV5 123 aa14.09□□□□□ -0.15
SHROOM1-202ENST00000378676 A0A0B4J2C4 111 aa14.08□□□□□ -0.16
SHROOM1-202ENST00000378676 IGHV1-58A0A0C4DH39 117 aa14.08□□□□□ -0.16
SHROOM1-202ENST00000378676 TINCRA0A1B0GVN0 87 aa14.08□□□□□ -0.16
SHROOM1-202ENST00000378676 DNAJC9-AS1A6NH13 148 aa14.08□□□□□ -0.16
SHROOM1-202ENST00000378676 HIST2H2BCQ6DN03 193 aa14.08□□□□□ -0.16
SHROOM1-202ENST00000378676 IGHV3OR16-12A0A075B7B8 117 aa14.07□□□□□ -0.16
SHROOM1-202ENST00000378676 H7C2G1 150 aa14.07□□□□□ -0.16
SHROOM1-202ENST00000378676 RNF183Q96D59 192 aa14.07□□□□□ -0.16
SHROOM1-202ENST00000378676 C1orf158Q8N1D5 194 aa14.07□□□□□ -0.16
SHROOM1-202ENST00000378676 DNAJC30Q96LL9 226 aa14.07□□□□□ -0.16
SHROOM1-202ENST00000378676 TRBV20-1A0A075B6N2 111 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms