RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 A0A0J9YY99 117 aa11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 LINC01619G3V211 115 aa11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 ANKRD17O75179 2603 aaKnown RBP11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 IGLV2-18A0A075B6J9 118 aa11.08□□□□□ -0.64
UBQLN1-202ENST00000376395 A0A0J9YX75 114 aa11.08□□□□□ -0.64
UBQLN1-202ENST00000376395 TRBV7-3A0A075B6L6 115 aa11.08□□□□□ -0.64
UBQLN1-202ENST00000376395 LINC01620Q4KN68 170 aa11.08□□□□□ -0.64
UBQLN1-202ENST00000376395 RS1O15537 224 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 C6orf226Q5I0X4 101 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 TRAV26-1A0A087WT03 109 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 GATA3P23771 443 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 IGHV3-30-3P0DP02 117 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 GAGE6Q13070 117 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 ZMAT4Q9H898 229 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 PRSS47A8MTI9 375 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 MED14OSP0DP75 135 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 CLEC2BQ92478 149 aa11.07□□□□□ -0.64
UBQLN1-202ENST00000376395 ELANEP08246 267 aa11.06□□□□□ -0.64
UBQLN1-202ENST00000376395 ASH1LQ9NR48 2969 aaKnown RBP11.06□□□□□ -0.64
UBQLN1-202ENST00000376395 RBMY1BA6NDE4 496 aaKnown RBP11.06□□□□□ -0.64
UBQLN1-202ENST00000376395 RBMY1EA6NEQ0 496 aaKnown RBP11.06□□□□□ -0.64
UBQLN1-202ENST00000376395 RBMY1DP0C7P1 496 aaKnown RBP11.06□□□□□ -0.64
UBQLN1-202ENST00000376395 RBMY1A1P0DJD3 496 aaKnown RBP11.06□□□□□ -0.64
UBQLN1-202ENST00000376395 RBMY1CP0DJD4 496 aa11.06□□□□□ -0.64
UBQLN1-202ENST00000376395 A6NDX4 124 aa11.05□□□□□ -0.64
UBQLN1-202ENST00000376395 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
UBQLN1-202ENST00000376395 VPREB3Q9UKI3 123 aa11.05□□□□□ -0.64
UBQLN1-202ENST00000376395 RELNP78509 3460 aa11.05□□□□□ -0.64
UBQLN1-202ENST00000376395 SS18L2Q9UHA2 77 aa11.05□□□□□ -0.64
UBQLN1-202ENST00000376395 ZNF580Q9UK33 172 aa11.04□□□□□ -0.64
UBQLN1-202ENST00000376395 K7EMT4 169 aa11.04□□□□□ -0.64
UBQLN1-202ENST00000376395 IFITM1P13164 125 aa11.04□□□□□ -0.64
UBQLN1-202ENST00000376395 CFAP161Q6P656 301 aa11.04□□□□□ -0.64
UBQLN1-202ENST00000376395 TMEM61Q8N0U2 210 aa11.04□□□□□ -0.64
UBQLN1-202ENST00000376395 SLC25A29Q8N8R3 303 aa11.04□□□□□ -0.64
UBQLN1-202ENST00000376395 CRYBA4P53673 196 aa11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 SMG1Q96Q15 3661 aaKnown RBP11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 ICOSQ9Y6W8 199 aa11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 MALP21145 153 aa11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 NXPH4O95158 308 aa11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 TSPEAR-AS2P59090 65 aa11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 COX8CQ7Z4L0 72 aa11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 PIFOQ8TCI5 191 aa11.03□□□□□ -0.64
UBQLN1-202ENST00000376395 PRB1P04280 392 aa11.02□□□□□ -0.64
UBQLN1-202ENST00000376395 Q6ZUT4 128 aa11.02□□□□□ -0.64
UBQLN1-202ENST00000376395 A0A096LPF7 62 aa11.02□□□□□ -0.65
UBQLN1-202ENST00000376395 AVPP01185 164 aa11.02□□□□□ -0.65
UBQLN1-202ENST00000376395 TMEM86BQ8N661 226 aa11.02□□□□□ -0.65
UBQLN1-202ENST00000376395 ZNF22P17026 224 aaPredicted RBP11.02□□□□□ -0.65
UBQLN1-202ENST00000376395 Q96MF0 132 aa11.02□□□□□ -0.65
UBQLN1-202ENST00000376395 CLPSL2Q6UWE3 100 aa11.01□□□□□ -0.65
UBQLN1-202ENST00000376395 TMEM243Q9BU79 118 aa11.01□□□□□ -0.65
UBQLN1-202ENST00000376395 A0A0J9YXY3 114 aa11.01□□□□□ -0.65
UBQLN1-202ENST00000376395 TEX49A0A1B0GTD5 131 aa11.01□□□□□ -0.65
UBQLN1-202ENST00000376395 M0QY20 66 aa11.01□□□□□ -0.65
UBQLN1-202ENST00000376395 HIST1H4AP62805 103 aaKnown RBP11.01□□□□□ -0.65
UBQLN1-202ENST00000376395 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
UBQLN1-202ENST00000376395 DOPEY1Q5JWR5 2465 aa11.01□□□□□ -0.65
UBQLN1-202ENST00000376395 HERVK_113P63121 156 aa11□□□□□ -0.65
UBQLN1-202ENST00000376395 SPANXA1Q9NS26 97 aa11□□□□□ -0.65
UBQLN1-202ENST00000376395 IGHV4-4A0A075B6R2 117 aa11□□□□□ -0.65
UBQLN1-202ENST00000376395 POLR2KP53803 58 aaKnown RBP11□□□□□ -0.65
UBQLN1-202ENST00000376395 IGLV4-3A0A075B6K6 122 aa11□□□□□ -0.65
UBQLN1-202ENST00000376395 CFAP126Q5VTH2 177 aa10.99□□□□□ -0.65
UBQLN1-202ENST00000376395 K7EQG2 157 aa10.99□□□□□ -0.65
UBQLN1-202ENST00000376395 Q6ZSV7 163 aa10.99□□□□□ -0.65
UBQLN1-202ENST00000376395 C5orf38Q86SI9 138 aa10.99□□□□□ -0.65
UBQLN1-202ENST00000376395 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 IGHV3-30P01768 117 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 IGHV3-30-5P0DP03 117 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 CRIP2P52943 208 aaPredicted RBP10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 RNF183Q96D59 192 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 XGP55808 180 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 EDA2RQ9HAV5 297 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 IGIPA6NJ69 53 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 NFE4Q86UQ8 179 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
UBQLN1-202ENST00000376395 TRBV27A0A0K0K1C4 114 aa10.97□□□□□ -0.65
UBQLN1-202ENST00000376395 C18orf65Q6ZTR6 163 aa10.97□□□□□ -0.65
UBQLN1-202ENST00000376395 CRYGDP07320 174 aa10.97□□□□□ -0.65
UBQLN1-202ENST00000376395 COL27A1Q8IZC6 1860 aaPredicted RBP10.97□□□□□ -0.65
UBQLN1-202ENST00000376395 IGHV3-33P01772 117 aa10.97□□□□□ -0.65
UBQLN1-202ENST00000376395 IGLV4-69A0A075B6H9 119 aa10.96□□□□□ -0.65
UBQLN1-202ENST00000376395 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.65
UBQLN1-202ENST00000376395 S100A7L2Q5SY68 101 aa10.96□□□□□ -0.65
UBQLN1-202ENST00000376395 ATP6V0E2Q8NHE4 81 aa10.96□□□□□ -0.65
UBQLN1-202ENST00000376395 DCANP1Q8TF63 244 aa10.96□□□□□ -0.65
UBQLN1-202ENST00000376395 TMEM223A0PJW6 202 aa10.96□□□□□ -0.66
UBQLN1-202ENST00000376395 KLLNB2CW77 178 aa10.96□□□□□ -0.66
UBQLN1-202ENST00000376395 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
UBQLN1-202ENST00000376395 LGALS9O00182 355 aa10.95□□□□□ -0.66
UBQLN1-202ENST00000376395 VSIG2Q96IQ7 327 aa10.95□□□□□ -0.66
UBQLN1-202ENST00000376395 TSHBP01222 138 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms