RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 ST20Q9HBF5 79 aa14.02□□□□□ -0.17
MAP1LC3A-202ENST00000374837 RBX1P62877 108 aa14.01□□□□□ -0.17
MAP1LC3A-202ENST00000374837 ATP5L2Q7Z4Y8 100 aa14.01□□□□□ -0.17
MAP1LC3A-202ENST00000374837 UBE2WQ96B02 151 aa14.01□□□□□ -0.17
MAP1LC3A-202ENST00000374837 A0A087WTM6 91 aa14□□□□□ -0.17
MAP1LC3A-202ENST00000374837 PSCAO43653 123 aa14□□□□□ -0.17
MAP1LC3A-202ENST00000374837 PMCHP20382 165 aa14□□□□□ -0.17
MAP1LC3A-202ENST00000374837 AMTP48728 403 aa14□□□□□ -0.17
MAP1LC3A-202ENST00000374837 SPATA12Q7Z6I5 190 aa14□□□□□ -0.17
MAP1LC3A-202ENST00000374837 TMEM70Q9BUB7 260 aa14□□□□□ -0.17
MAP1LC3A-202ENST00000374837 TM2D2Q9BX73 214 aa14□□□□□ -0.17
MAP1LC3A-202ENST00000374837 I3L3M4 83 aa13.99□□□□□ -0.17
MAP1LC3A-202ENST00000374837 ANGP03950 147 aaKnown RBP13.99□□□□□ -0.17
MAP1LC3A-202ENST00000374837 POLR2KP53803 58 aaKnown RBP13.99□□□□□ -0.17
MAP1LC3A-202ENST00000374837 NRACQ8N912 160 aa13.99□□□□□ -0.17
MAP1LC3A-202ENST00000374837 DYNC1H1Q14204 4646 aaKnown RBP13.99□□□□□ -0.17
MAP1LC3A-202ENST00000374837 KRTAP10-2P60368 255 aa13.98□□□□□ -0.17
MAP1LC3A-202ENST00000374837 C10orf91Q5T1B1 145 aa13.98□□□□□ -0.17
MAP1LC3A-202ENST00000374837 ENHOQ6UWT2 76 aa13.98□□□□□ -0.17
MAP1LC3A-202ENST00000374837 LRCOL1A6NCL2 159 aa13.97□□□□□ -0.17
MAP1LC3A-202ENST00000374837 EREGO14944 169 aa13.97□□□□□ -0.17
MAP1LC3A-202ENST00000374837 PPP1R17O96001 155 aa13.97□□□□□ -0.17
MAP1LC3A-202ENST00000374837 CTDSP1Q9GZU7 261 aa13.97□□□□□ -0.17
MAP1LC3A-202ENST00000374837 UBE2L6O14933 153 aa13.96□□□□□ -0.17
MAP1LC3A-202ENST00000374837 CKS2P33552 79 aa13.96□□□□□ -0.17
MAP1LC3A-202ENST00000374837 Q0VG73 95 aa13.96□□□□□ -0.17
MAP1LC3A-202ENST00000374837 RMI2Q96E14 147 aa13.96□□□□□ -0.17
MAP1LC3A-202ENST00000374837 IMMP2LQ96T52 175 aa13.96□□□□□ -0.17
MAP1LC3A-202ENST00000374837 IGKV2D-24A0A075B6R9 120 aa13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 TRBV27A0A0K0K1C4 114 aa13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 A0A1B0GUV1 79 aa13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 TSHBP01222 138 aa13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 APCSP02743 223 aa13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 SUMO2P61956 95 aaKnown RBP13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 BTF3L4Q96K17 158 aa13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 TMEM242Q9NWH2 141 aa13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 CARHSP1Q9Y2V2 147 aaKnown RBP13.95□□□□□ -0.18
MAP1LC3A-202ENST00000374837 IGLV4-60A0A075B6I1 120 aa13.94□□□□□ -0.18
MAP1LC3A-202ENST00000374837 VCYO14598 125 aa13.94□□□□□ -0.18
MAP1LC3A-202ENST00000374837 CRPP02741 224 aa13.94□□□□□ -0.18
MAP1LC3A-202ENST00000374837 LINC00269Q8N2A0 174 aa13.94□□□□□ -0.18
MAP1LC3A-202ENST00000374837 MAPKAPK5-AS1Q8N8E1 139 aa13.94□□□□□ -0.18
MAP1LC3A-202ENST00000374837 C20orf203Q8NBC4 194 aa13.94□□□□□ -0.18
MAP1LC3A-202ENST00000374837 COX11Q9Y6N1 276 aa13.94□□□□□ -0.18
MAP1LC3A-202ENST00000374837 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.93□□□□□ -0.18
MAP1LC3A-202ENST00000374837 IGKV2-29A2NJV5 120 aaPredicted RBP13.93□□□□□ -0.18
MAP1LC3A-202ENST00000374837 C16orf90A8MZG2 172 aa13.93□□□□□ -0.18
MAP1LC3A-202ENST00000374837 D6R8Y8 96 aa13.93□□□□□ -0.18
MAP1LC3A-202ENST00000374837 PRR34Q9NV39 138 aa13.93□□□□□ -0.18
MAP1LC3A-202ENST00000374837 TRBV24-1A0A075B6N3 115 aa13.92□□□□□ -0.18
MAP1LC3A-202ENST00000374837 TNFRSF6BO95407 300 aa13.92□□□□□ -0.18
MAP1LC3A-202ENST00000374837 ESDP10768 282 aa13.92□□□□□ -0.18
MAP1LC3A-202ENST00000374837 FUSP35637 526 aaKnown RBP eCLIP13.92□□□□□ -0.18
MAP1LC3A-202ENST00000374837 CLPSL2Q6UWE3 100 aa13.92□□□□□ -0.18
MAP1LC3A-202ENST00000374837 C20orf78Q9BR46 151 aa13.92□□□□□ -0.18
MAP1LC3A-202ENST00000374837 C7orf77A4D0Y5 90 aa13.91□□□□□ -0.18
MAP1LC3A-202ENST00000374837 H7C423 109 aa13.91□□□□□ -0.18
MAP1LC3A-202ENST00000374837 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
MAP1LC3A-202ENST00000374837 PGPEP1Q9NXJ5 209 aa13.91□□□□□ -0.18
MAP1LC3A-202ENST00000374837 PPBPP02775 128 aa13.9□□□□□ -0.18
MAP1LC3A-202ENST00000374837 WFDC2Q14508 124 aa13.9□□□□□ -0.18
MAP1LC3A-202ENST00000374837 MIAQ16674 131 aa13.9□□□□□ -0.18
MAP1LC3A-202ENST00000374837 BAALCQ8WXS3 180 aa13.9□□□□□ -0.18
MAP1LC3A-202ENST00000374837 C1orf43Q9BWL3 253 aa13.9□□□□□ -0.18
MAP1LC3A-202ENST00000374837 PKHD1P08F94 4074 aa13.9□□□□□ -0.19
MAP1LC3A-202ENST00000374837 NPYP01303 97 aa13.89□□□□□ -0.19
MAP1LC3A-202ENST00000374837 FGF6P10767 208 aa13.89□□□□□ -0.19
MAP1LC3A-202ENST00000374837 RPL32P62910 135 aaKnown RBP13.89□□□□□ -0.19
MAP1LC3A-202ENST00000374837 REG3AQ06141 175 aa13.89□□□□□ -0.19
MAP1LC3A-202ENST00000374837 AMMECR1LQ6DCA0 310 aa13.89□□□□□ -0.19
MAP1LC3A-202ENST00000374837 TMEM136Q6ZRR5 245 aa13.89□□□□□ -0.19
MAP1LC3A-202ENST00000374837 ABCA13Q86UQ4 5058 aa13.88□□□□□ -0.19
MAP1LC3A-202ENST00000374837 RNASEKQ6P5S7 137 aaKnown RBP13.88□□□□□ -0.19
MAP1LC3A-202ENST00000374837 ORMDL3Q8N138 153 aa13.88□□□□□ -0.19
MAP1LC3A-202ENST00000374837 RPS10P5Q9NQ39 176 aa13.88□□□□□ -0.19
MAP1LC3A-202ENST00000374837 TRAV9-1A0A075B6T8 112 aa13.87□□□□□ -0.19
MAP1LC3A-202ENST00000374837 PHOX2AO14813 284 aa13.87□□□□□ -0.19
MAP1LC3A-202ENST00000374837 LECT2O14960 151 aa13.87□□□□□ -0.19
MAP1LC3A-202ENST00000374837 FCER1GP30273 86 aa13.87□□□□□ -0.19
MAP1LC3A-202ENST00000374837 RHEBQ15382 184 aa13.87□□□□□ -0.19
MAP1LC3A-202ENST00000374837 Q8N814 137 aa13.87□□□□□ -0.19
MAP1LC3A-202ENST00000374837 PRELID3AQ96N28 172 aa13.87□□□□□ -0.19
MAP1LC3A-202ENST00000374837 KIR2DL4Q99706 377 aa13.87□□□□□ -0.19
MAP1LC3A-202ENST00000374837 APOC3P02656 99 aa13.85□□□□□ -0.19
MAP1LC3A-202ENST00000374837 S100PP25815 95 aa13.85□□□□□ -0.19
MAP1LC3A-202ENST00000374837 CDPF1Q6NVV7 123 aa13.85□□□□□ -0.19
MAP1LC3A-202ENST00000374837 KRTAP26-1Q6PEX3 210 aa13.85□□□□□ -0.19
MAP1LC3A-202ENST00000374837 SMIM2Q9BVW6 85 aa13.85□□□□□ -0.19
MAP1LC3A-202ENST00000374837 KRTAP4-5Q9BYR2 181 aa13.85□□□□□ -0.19
MAP1LC3A-202ENST00000374837 IGLV10-54A0A075B6I4 117 aa13.83□□□□□ -0.2
MAP1LC3A-202ENST00000374837 TRAV8-4A0A0B4J246 113 aa13.83□□□□□ -0.2
MAP1LC3A-202ENST00000374837 ZNF25P17030 456 aaPredicted RBP13.83□□□□□ -0.2
MAP1LC3A-202ENST00000374837 LRP1BQ9NZR2 4599 aa13.83□□□□□ -0.2
MAP1LC3A-202ENST00000374837 DNAH5Q8TE73 4624 aa13.83□□□□□ -0.2
MAP1LC3A-202ENST00000374837 NDUFA5Q16718 116 aa13.82□□□□□ -0.2
MAP1LC3A-202ENST00000374837 MRPL52Q86TS9 123 aaKnown RBP13.82□□□□□ -0.2
MAP1LC3A-202ENST00000374837 NTN5Q8WTR8 489 aaPredicted RBP13.82□□□□□ -0.2
MAP1LC3A-202ENST00000374837 TMEM101Q96IK0 257 aa13.82□□□□□ -0.2
MAP1LC3A-202ENST00000374837 LAMTOR2Q9Y2Q5 125 aa13.82□□□□□ -0.2
MAP1LC3A-202ENST00000374837 OR5A1Q8NGJ0 315 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms