RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 FAM19A4Q96LR4 140 aa14.9□□□□□ -0.02
SYNC-201ENST00000373484 GAGE12HA6NDE8 117 aa14.89□□□□□ -0.03
SYNC-201ENST00000373484 KNCNA6PVL3 124 aa14.89□□□□□ -0.03
SYNC-201ENST00000373484 RPL35AP18077 110 aaKnown RBP14.89□□□□□ -0.03
SYNC-201ENST00000373484 WFDC2Q14508 124 aa14.89□□□□□ -0.03
SYNC-201ENST00000373484 STHQ8IWL8 128 aa14.89□□□□□ -0.03
SYNC-201ENST00000373484 C20orf173Q96LM9 149 aa14.89□□□□□ -0.03
SYNC-201ENST00000373484 APOC4P55056 127 aa14.89□□□□□ -0.03
SYNC-201ENST00000373484 LYRM7Q5U5X0 104 aa14.89□□□□□ -0.03
SYNC-201ENST00000373484 KIR2DL5BQ8NHK3 375 aa14.89□□□□□ -0.03
SYNC-201ENST00000373484 TRPT1Q86TN4 253 aaKnown RBP14.88□□□□□ -0.03
SYNC-201ENST00000373484 C2orf66Q6UXQ4 117 aa14.87□□□□□ -0.03
SYNC-201ENST00000373484 BAALCQ8WXS3 180 aa14.87□□□□□ -0.03
SYNC-201ENST00000373484 PRR9Q5T870 116 aa14.87□□□□□ -0.03
SYNC-201ENST00000373484 PHLDA3Q9Y5J5 127 aa14.87□□□□□ -0.03
SYNC-201ENST00000373484 NBEAL2Q6ZNJ1 2754 aa14.87□□□□□ -0.03
SYNC-201ENST00000373484 H3BMG7 143 aa14.86□□□□□ -0.03
SYNC-201ENST00000373484 AZU1P20160 251 aa14.86□□□□□ -0.03
SYNC-201ENST00000373484 S100A4P26447 101 aaKnown RBP14.86□□□□□ -0.03
SYNC-201ENST00000373484 UBE2D1P51668 147 aa14.86□□□□□ -0.03
SYNC-201ENST00000373484 DEFB1P60022 68 aa14.86□□□□□ -0.03
SYNC-201ENST00000373484 TENM3Q9P273 2699 aa14.86□□□□□ -0.03
SYNC-201ENST00000373484 MORN3Q6PF18 240 aaPredicted RBP14.85□□□□□ -0.03
SYNC-201ENST00000373484 PRADC1Q9BSG0 188 aa14.85□□□□□ -0.03
SYNC-201ENST00000373484 PRSS29PA6NIE9 313 aa14.85□□□□□ -0.03
SYNC-201ENST00000373484 H3BMM0 161 aa14.85□□□□□ -0.03
SYNC-201ENST00000373484 HERVK_113P61574 105 aa14.85□□□□□ -0.03
SYNC-201ENST00000373484 TMEM141Q96I45 108 aa14.84□□□□□ -0.03
SYNC-201ENST00000373484 F6UB75 175 aa14.83□□□□□ -0.04
SYNC-201ENST00000373484 CYSLTR1Q9Y271 337 aa14.83□□□□□ -0.04
SYNC-201ENST00000373484 A0A0J9YX75 114 aa14.82□□□□□ -0.04
SYNC-201ENST00000373484 ETDBQ3ZM63 59 aa14.82□□□□□ -0.04
SYNC-201ENST00000373484 VCX2Q9H322 139 aa14.82□□□□□ -0.04
SYNC-201ENST00000373484 RETNQ9HD89 108 aa14.82□□□□□ -0.04
SYNC-201ENST00000373484 ZNF815PA8K554 130 aa14.81□□□□□ -0.04
SYNC-201ENST00000373484 ANXA2RQ3ZCQ2 193 aa14.81□□□□□ -0.04
SYNC-201ENST00000373484 CLUHP3Q96NS8 147 aa14.81□□□□□ -0.04
SYNC-201ENST00000373484 DEFB135Q30KP9 77 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 C14orf178Q8N769 122 aaPredicted RBP14.8□□□□□ -0.04
SYNC-201ENST00000373484 TIMM17AQ99595 171 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 GIG44P09565 113 aaPredicted RBP14.8□□□□□ -0.04
SYNC-201ENST00000373484 CFAP126Q5VTH2 177 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 Q6ZQT7 251 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 RPL39LQ96EH5 51 aaKnown RBP14.8□□□□□ -0.04
SYNC-201ENST00000373484 C1QTNF4Q9BXJ3 329 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 GTSF1LQ9H1H1 148 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 PGPEP1Q9NXJ5 209 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 TP53TG1Q9Y2A0 90 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 KIF25-AS1Q9Y6Z4 181 aa14.8□□□□□ -0.04
SYNC-201ENST00000373484 A0A1B0GV72 72 aa14.79□□□□□ -0.04
SYNC-201ENST00000373484 A8MTW9 85 aa14.79□□□□□ -0.04
SYNC-201ENST00000373484 UBE2D3P61077 147 aa14.79□□□□□ -0.04
SYNC-201ENST00000373484 UBE2D2P62837 147 aa14.79□□□□□ -0.04
SYNC-201ENST00000373484 OVOL2Q9BRP0 275 aa14.79□□□□□ -0.04
SYNC-201ENST00000373484 MRPL16Q9NX20 251 aaKnown RBP14.79□□□□□ -0.04
SYNC-201ENST00000373484 TRBV20-1A0A075B6N2 111 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 IGIPA6NJ69 53 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 VCYO14598 125 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 RNASE3P12724 160 aaKnown RBP14.78□□□□□ -0.04
SYNC-201ENST00000373484 POLR2KP53803 58 aaKnown RBP14.78□□□□□ -0.04
SYNC-201ENST00000373484 PMVKQ15126 192 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 SH2D6Q7Z4S9 175 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 RNF183Q96D59 192 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 IGKV3-20P01619 116 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 LINC00315P59091 139 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 SCGB1D4Q6XE38 83 aa14.78□□□□□ -0.04
SYNC-201ENST00000373484 STAB2Q8WWQ8 2551 aa14.77□□□□□ -0.04
SYNC-201ENST00000373484 TRBV6-5A0A0K0K1A5 114 aa14.77□□□□□ -0.05
SYNC-201ENST00000373484 C11orf86A6NJI1 115 aa14.77□□□□□ -0.05
SYNC-201ENST00000373484 SPRY2O43597 315 aa14.77□□□□□ -0.05
SYNC-201ENST00000373484 DUSP14O95147 198 aaKnown RBP14.77□□□□□ -0.05
SYNC-201ENST00000373484 SRSF9Q13242 221 aaKnown RBP eCLIP14.77□□□□□ -0.05
SYNC-201ENST00000373484 AMTNQ6UX39 209 aa14.77□□□□□ -0.05
SYNC-201ENST00000373484 KLLNB2CW77 178 aa14.76□□□□□ -0.05
SYNC-201ENST00000373484 APOMO95445 188 aa14.76□□□□□ -0.05
SYNC-201ENST00000373484 CRYGDP07320 174 aa14.76□□□□□ -0.05
SYNC-201ENST00000373484 MGPP08493 103 aa14.76□□□□□ -0.05
SYNC-201ENST00000373484 FOXI1Q12951 378 aa14.76□□□□□ -0.05
SYNC-201ENST00000373484 IGLV4-69A0A075B6H9 119 aa14.76□□□□□ -0.05
SYNC-201ENST00000373484 SMAGPQ0VAQ4 97 aa14.76□□□□□ -0.05
SYNC-201ENST00000373484 A0A0J9YY99 117 aa14.75□□□□□ -0.05
SYNC-201ENST00000373484 RNASE4P34096 147 aaKnown RBP14.75□□□□□ -0.05
SYNC-201ENST00000373484 ODF3Q96PU9 254 aa14.75□□□□□ -0.05
SYNC-201ENST00000373484 KIR2DL4Q99706 377 aa14.75□□□□□ -0.05
SYNC-201ENST00000373484 M0QXV9 152 aa14.74□□□□□ -0.05
SYNC-201ENST00000373484 ZFP2Q6ZN57 461 aa14.74□□□□□ -0.05
SYNC-201ENST00000373484 CSNK1G2-AS1Q8NCQ2 148 aa14.74□□□□□ -0.05
SYNC-201ENST00000373484 TRBV27A0A0K0K1C4 114 aa14.73□□□□□ -0.05
SYNC-201ENST00000373484 TSPAN13O95857 204 aa14.73□□□□□ -0.05
SYNC-201ENST00000373484 MTURNQ8N3F0 131 aa14.73□□□□□ -0.05
SYNC-201ENST00000373484 SLC25A29Q8N8R3 303 aa14.73□□□□□ -0.05
SYNC-201ENST00000373484 XCL2Q9UBD3 114 aa14.73□□□□□ -0.05
SYNC-201ENST00000373484 TSHBP01222 138 aa14.72□□□□□ -0.05
SYNC-201ENST00000373484 RHOHQ15669 191 aa14.71□□□□□ -0.05
SYNC-201ENST00000373484 ZNF876PQ49A33 203 aa14.71□□□□□ -0.05
SYNC-201ENST00000373484 NFE4Q86UQ8 179 aa14.71□□□□□ -0.05
SYNC-201ENST00000373484 PLEKHB2Q96CS7 222 aa14.71□□□□□ -0.05
SYNC-201ENST00000373484 GNRH2O43555 120 aa14.71□□□□□ -0.06
SYNC-201ENST00000373484 PPDPFLQ8WWR9 84 aa14.71□□□□□ -0.06
SYNC-201ENST00000373484 SMCPP49901 116 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms