RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 LINC00526Q96FQ7 95 aa9.48□□□□□ -0.89
TRAPPC3-203ENST00000373163 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
TRAPPC3-203ENST00000373163 PSMG3Q9BT73 122 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC3-203ENST00000373163 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC3-203ENST00000373163 A0A1W2PNN7 141 aa9.47□□□□□ -0.89
TRAPPC3-203ENST00000373163 MGPP08493 103 aa9.47□□□□□ -0.89
TRAPPC3-203ENST00000373163 OR5AL1P0C617 328 aa9.47□□□□□ -0.89
TRAPPC3-203ENST00000373163 FOXI1Q12951 378 aa9.47□□□□□ -0.89
TRAPPC3-203ENST00000373163 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
TRAPPC3-203ENST00000373163 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
TRAPPC3-203ENST00000373163 NKX6-2Q9C056 277 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC3-203ENST00000373163 FAM74A7A6NL05 159 aa9.46□□□□□ -0.9
TRAPPC3-203ENST00000373163 AMTP48728 403 aa9.46□□□□□ -0.9
TRAPPC3-203ENST00000373163 SERF2P84101 59 aa9.46□□□□□ -0.9
TRAPPC3-203ENST00000373163 SUMO4Q6EEV6 95 aa9.46□□□□□ -0.9
TRAPPC3-203ENST00000373163 H0Y9J4 135 aa9.44□□□□□ -0.9
TRAPPC3-203ENST00000373163 IGLV7-43P04211 117 aa9.44□□□□□ -0.9
TRAPPC3-203ENST00000373163 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
TRAPPC3-203ENST00000373163 MARVELD1Q9BSK0 173 aa9.44□□□□□ -0.9
TRAPPC3-203ENST00000373163 MED28Q9H204 178 aa9.44□□□□□ -0.9
TRAPPC3-203ENST00000373163 CRCT1Q9UGL9 99 aa9.44□□□□□ -0.9
TRAPPC3-203ENST00000373163 TNFSF18Q9UNG2 199 aa9.44□□□□□ -0.9
TRAPPC3-203ENST00000373163 IGHV1-58A0A0C4DH39 117 aa9.43□□□□□ -0.9
TRAPPC3-203ENST00000373163 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
TRAPPC3-203ENST00000373163 UBE2D1P51668 147 aa9.43□□□□□ -0.9
TRAPPC3-203ENST00000373163 COTL1Q14019 142 aa9.43□□□□□ -0.9
TRAPPC3-203ENST00000373163 TRAV1-1A0A0B4J248 108 aa9.42□□□□□ -0.9
TRAPPC3-203ENST00000373163 KRTAP1-4P0C5Y4 121 aa9.42□□□□□ -0.9
TRAPPC3-203ENST00000373163 ZNF726P1Q15940 193 aa9.42□□□□□ -0.9
TRAPPC3-203ENST00000373163 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC3-203ENST00000373163 AMMECR1LQ6DCA0 310 aa9.42□□□□□ -0.9
TRAPPC3-203ENST00000373163 RASL11AQ6T310 242 aa9.42□□□□□ -0.9
TRAPPC3-203ENST00000373163 ZNF561-AS1K7EIQ3 104 aa9.41□□□□□ -0.9
TRAPPC3-203ENST00000373163 XCL1P47992 114 aa9.41□□□□□ -0.9
TRAPPC3-203ENST00000373163 PHF5AQ7RTV0 110 aaKnown RBP9.41□□□□□ -0.9
TRAPPC3-203ENST00000373163 CTXND1A0A1B0GTU2 59 aa9.4□□□□□ -0.9
TRAPPC3-203ENST00000373163 LINC00862A6NCI5 91 aa9.4□□□□□ -0.9
TRAPPC3-203ENST00000373163 RPL13AP40429 203 aaKnown RBP9.4□□□□□ -0.9
TRAPPC3-203ENST00000373163 AKR1C3P42330 323 aa9.4□□□□□ -0.9
TRAPPC3-203ENST00000373163 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
TRAPPC3-203ENST00000373163 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC3-203ENST00000373163 NIT2Q9NQR4 276 aa9.4□□□□□ -0.9
TRAPPC3-203ENST00000373163 ALG5Q9Y673 324 aa9.4□□□□□ -0.9
TRAPPC3-203ENST00000373163 INMT-MINDY4F8WBC2 141 aa9.39□□□□□ -0.91
TRAPPC3-203ENST00000373163 BCL2P10415 239 aa9.39□□□□□ -0.91
TRAPPC3-203ENST00000373163 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
TRAPPC3-203ENST00000373163 TCEAL7Q9BRU2 100 aa9.39□□□□□ -0.91
TRAPPC3-203ENST00000373163 FGF6P10767 208 aa9.38□□□□□ -0.91
TRAPPC3-203ENST00000373163 CAMPP49913 170 aa9.38□□□□□ -0.91
TRAPPC3-203ENST00000373163 STOML3Q8TAV4 291 aa9.38□□□□□ -0.91
TRAPPC3-203ENST00000373163 ISOC2Q96AB3 205 aa9.38□□□□□ -0.91
TRAPPC3-203ENST00000373163 CCL25O15444 150 aa9.37□□□□□ -0.91
TRAPPC3-203ENST00000373163 SSNA1O43805 119 aa9.37□□□□□ -0.91
TRAPPC3-203ENST00000373163 CST9LP1Q5W188 147 aa9.37□□□□□ -0.91
TRAPPC3-203ENST00000373163 TPPP3Q9BW30 176 aa9.37□□□□□ -0.91
TRAPPC3-203ENST00000373163 A0A087WZ39 114 aa9.36□□□□□ -0.91
TRAPPC3-203ENST00000373163 APOMO95445 188 aa9.36□□□□□ -0.91
TRAPPC3-203ENST00000373163 TSPAN13O95857 204 aa9.36□□□□□ -0.91
TRAPPC3-203ENST00000373163 C9orf62Q8N4C0 152 aa9.36□□□□□ -0.91
TRAPPC3-203ENST00000373163 OR5A1Q8NGJ0 315 aa9.36□□□□□ -0.91
TRAPPC3-203ENST00000373163 MLST8Q9BVC4 326 aa9.36□□□□□ -0.91
TRAPPC3-203ENST00000373163 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
TRAPPC3-203ENST00000373163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC3-203ENST00000373163 LINC00959A0A1B0GUT2 108 aa9.35□□□□□ -0.91
TRAPPC3-203ENST00000373163 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC3-203ENST00000373163 FHITP49789 147 aa9.35□□□□□ -0.91
TRAPPC3-203ENST00000373163 RAB14P61106 215 aa9.35□□□□□ -0.91
TRAPPC3-203ENST00000373163 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
TRAPPC3-203ENST00000373163 Q5BKY6 102 aa9.35□□□□□ -0.91
TRAPPC3-203ENST00000373163 FSIP2Q5CZC0 6907 aa9.34□□□□□ -0.91
TRAPPC3-203ENST00000373163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC3-203ENST00000373163 H7C423 109 aa9.34□□□□□ -0.91
TRAPPC3-203ENST00000373163 NTF3P20783 257 aa9.34□□□□□ -0.91
TRAPPC3-203ENST00000373163 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC3-203ENST00000373163 CLLU1Q5K131 121 aa9.34□□□□□ -0.91
TRAPPC3-203ENST00000373163 BAGE2Q86Y30 109 aa9.34□□□□□ -0.91
TRAPPC3-203ENST00000373163 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
TRAPPC3-203ENST00000373163 S100A9P06702 114 aaKnown RBP9.33□□□□□ -0.92
TRAPPC3-203ENST00000373163 SLC51BQ86UW2 128 aa9.33□□□□□ -0.92
TRAPPC3-203ENST00000373163 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
TRAPPC3-203ENST00000373163 MAP1LC3B2A6NCE7 125 aa9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 IGLC6P0CF74 106 aa9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 ZNF25P17030 456 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 TEX261Q6UWH6 196 aa9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 TSKUQ8WUA8 353 aa9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 CAMK2N2Q96S95 79 aa9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 MAP1LC3BQ9GZQ8 125 aa9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 TMA7Q9Y2S6 64 aaKnown RBP9.32□□□□□ -0.92
TRAPPC3-203ENST00000373163 LOC105371267A0A1B0GV96 52 aa9.31□□□□□ -0.92
TRAPPC3-203ENST00000373163 NCR2O95944 276 aa9.31□□□□□ -0.92
TRAPPC3-203ENST00000373163 APCSP02743 223 aa9.31□□□□□ -0.92
TRAPPC3-203ENST00000373163 TRGC1P0CF51 173 aa9.31□□□□□ -0.92
TRAPPC3-203ENST00000373163 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
TRAPPC3-203ENST00000373163 CARHSP1Q9Y2V2 147 aaKnown RBP9.31□□□□□ -0.92
TRAPPC3-203ENST00000373163 SS18Q15532 418 aa9.3□□□□□ -0.92
TRAPPC3-203ENST00000373163 AKR1C8PQ5T2L2 129 aa9.3□□□□□ -0.92
TRAPPC3-203ENST00000373163 RPL7L1Q6DKI1 246 aaKnown RBP9.3□□□□□ -0.92
TRAPPC3-203ENST00000373163 BTF3L4Q96K17 158 aa9.3□□□□□ -0.92
TRAPPC3-203ENST00000373163 SCO2A0A1W2PP80 73 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms