RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 COTL1Q14019 142 aa13.22□□□□□ -0.29
TMEM53-205ENST00000372244 BAALCQ8WXS3 180 aa13.22□□□□□ -0.29
TMEM53-205ENST00000372244 TRBV6-5A0A0K0K1A5 114 aa13.21□□□□□ -0.3
TMEM53-205ENST00000372244 GAS8-AS1O95177 125 aa13.21□□□□□ -0.3
TMEM53-205ENST00000372244 GCSHP23434 173 aa13.21□□□□□ -0.3
TMEM53-205ENST00000372244 RIGQ13278 110 aa13.21□□□□□ -0.3
TMEM53-205ENST00000372244 DEFB104AQ8WTQ1 72 aa13.21□□□□□ -0.3
TMEM53-205ENST00000372244 IGLV5-52A0A0A0MRZ9 124 aa13.19□□□□□ -0.3
TMEM53-205ENST00000372244 SDHAF1A6NFY7 115 aa13.19□□□□□ -0.3
TMEM53-205ENST00000372244 LECT2O14960 151 aa13.19□□□□□ -0.3
TMEM53-205ENST00000372244 MIAQ16674 131 aa13.19□□□□□ -0.3
TMEM53-205ENST00000372244 LINC00269Q8N2A0 174 aa13.19□□□□□ -0.3
TMEM53-205ENST00000372244 C1orf43Q9BWL3 253 aa13.19□□□□□ -0.3
TMEM53-205ENST00000372244 NCR2O95944 276 aa13.18□□□□□ -0.3
TMEM53-205ENST00000372244 CRPP02741 224 aa13.18□□□□□ -0.3
TMEM53-205ENST00000372244 CLLU1Q5K131 121 aa13.18□□□□□ -0.3
TMEM53-205ENST00000372244 AMN1Q8IY45 258 aa13.18□□□□□ -0.3
TMEM53-205ENST00000372244 C20orf203Q8NBC4 194 aa13.18□□□□□ -0.3
TMEM53-205ENST00000372244 PCLOQ9Y6V0 5065 aa13.18□□□□□ -0.3
TMEM53-205ENST00000372244 AMTP48728 403 aa13.17□□□□□ -0.3
TMEM53-205ENST00000372244 MRAP2Q96G30 205 aa13.17□□□□□ -0.3
TMEM53-205ENST00000372244 IGLV4-60A0A075B6I1 120 aa13.16□□□□□ -0.3
TMEM53-205ENST00000372244 XGP55808 180 aa13.16□□□□□ -0.3
TMEM53-205ENST00000372244 IFITM2Q01629 132 aa13.16□□□□□ -0.3
TMEM53-205ENST00000372244 KRTAP26-1Q6PEX3 210 aa13.16□□□□□ -0.3
TMEM53-205ENST00000372244 RPS10P46783 165 aaKnown RBP13.16□□□□□ -0.3
TMEM53-205ENST00000372244 POLR2KP53803 58 aaKnown RBP13.16□□□□□ -0.3
TMEM53-205ENST00000372244 KRTAP4-5Q9BYR2 181 aa13.16□□□□□ -0.3
TMEM53-205ENST00000372244 A0A1B0GW15 77 aa13.15□□□□□ -0.3
TMEM53-205ENST00000372244 I3L3M4 83 aa13.15□□□□□ -0.3
TMEM53-205ENST00000372244 REG3AQ06141 175 aa13.15□□□□□ -0.3
TMEM53-205ENST00000372244 TMEM70Q9BUB7 260 aa13.15□□□□□ -0.3
TMEM53-205ENST00000372244 ST20Q9HBF5 79 aa13.15□□□□□ -0.3
TMEM53-205ENST00000372244 UBE2L6O14933 153 aa13.14□□□□□ -0.31
TMEM53-205ENST00000372244 FAM104BQ5XKR9 115 aa13.14□□□□□ -0.31
TMEM53-205ENST00000372244 Q8N1X5 172 aa13.14□□□□□ -0.31
TMEM53-205ENST00000372244 H7C423 109 aa13.13□□□□□ -0.31
TMEM53-205ENST00000372244 PMCHP20382 165 aa13.13□□□□□ -0.31
TMEM53-205ENST00000372244 CLPSL2Q6UWE3 100 aa13.13□□□□□ -0.31
TMEM53-205ENST00000372244 TRBV27A0A0K0K1C4 114 aa13.12□□□□□ -0.31
TMEM53-205ENST00000372244 TRAV8-4A0A0B4J246 113 aa13.11□□□□□ -0.31
TMEM53-205ENST00000372244 PPP1R17O96001 155 aa13.11□□□□□ -0.31
TMEM53-205ENST00000372244 TSHBP01222 138 aa13.11□□□□□ -0.31
TMEM53-205ENST00000372244 ESDP10768 282 aa13.11□□□□□ -0.31
TMEM53-205ENST00000372244 CAMPP49913 170 aa13.11□□□□□ -0.31
TMEM53-205ENST00000372244 PNRC1Q12796 327 aaPredicted RBP13.11□□□□□ -0.31
TMEM53-205ENST00000372244 NRACQ8N912 160 aa13.11□□□□□ -0.31
TMEM53-205ENST00000372244 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.1□□□□□ -0.31
TMEM53-205ENST00000372244 A0A1B0GXF2 115 aa13.1□□□□□ -0.31
TMEM53-205ENST00000372244 SMKR1H3BMG3 65 aa13.1□□□□□ -0.31
TMEM53-205ENST00000372244 PPP1R2P9O14990 202 aa13.1□□□□□ -0.31
TMEM53-205ENST00000372244 APCSP02743 223 aa13.1□□□□□ -0.31
TMEM53-205ENST00000372244 MRPL51Q4U2R6 128 aaKnown RBP13.1□□□□□ -0.31
TMEM53-205ENST00000372244 ABCA13Q86UQ4 5058 aa13.1□□□□□ -0.31
TMEM53-205ENST00000372244 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.09□□□□□ -0.31
TMEM53-205ENST00000372244 IGKV2-29A2NJV5 120 aaPredicted RBP13.09□□□□□ -0.31
TMEM53-205ENST00000372244 LINC00862A6NCI5 91 aa13.09□□□□□ -0.31
TMEM53-205ENST00000372244 VCYO14598 125 aa13.09□□□□□ -0.31
TMEM53-205ENST00000372244 C14orf177Q52M58 125 aa13.09□□□□□ -0.31
TMEM53-205ENST00000372244 DNAH8Q96JB1 4490 aa13.09□□□□□ -0.31
TMEM53-205ENST00000372244 TRBV24-1A0A075B6N3 115 aa13.08□□□□□ -0.32
TMEM53-205ENST00000372244 USP17L23D6RBM5 183 aa13.08□□□□□ -0.32
TMEM53-205ENST00000372244 FGF6P10767 208 aa13.08□□□□□ -0.32
TMEM53-205ENST00000372244 HBBP68871 147 aa13.08□□□□□ -0.32
TMEM53-205ENST00000372244 MRPL54Q6P161 138 aaKnown RBP13.08□□□□□ -0.32
TMEM53-205ENST00000372244 FAM30AQ9NZY2 134 aa13.08□□□□□ -0.32
TMEM53-205ENST00000372244 IGLV10-54A0A075B6I4 117 aa13.07□□□□□ -0.32
TMEM53-205ENST00000372244 S100A8P05109 93 aa13.07□□□□□ -0.32
TMEM53-205ENST00000372244 SUMO2P61956 95 aaKnown RBP13.07□□□□□ -0.32
TMEM53-205ENST00000372244 AMMECR1LQ6DCA0 310 aa13.07□□□□□ -0.32
TMEM53-205ENST00000372244 TMEM242Q9NWH2 141 aa13.07□□□□□ -0.32
TMEM53-205ENST00000372244 HLA-DQA1P01909 254 aa13.06□□□□□ -0.32
TMEM53-205ENST00000372244 MT-ND4LP03901 98 aa13.06□□□□□ -0.32
TMEM53-205ENST00000372244 UQCC3Q6UW78 93 aa13.06□□□□□ -0.32
TMEM53-205ENST00000372244 ANAPC16Q96DE5 110 aa13.06□□□□□ -0.32
TMEM53-205ENST00000372244 F8W036 122 aa13.05□□□□□ -0.32
TMEM53-205ENST00000372244 ZNF25P17030 456 aaPredicted RBP13.05□□□□□ -0.32
TMEM53-205ENST00000372244 Q6ZSA8 131 aa13.05□□□□□ -0.32
TMEM53-205ENST00000372244 ATP5L2Q7Z4Y8 100 aa13.05□□□□□ -0.32
TMEM53-205ENST00000372244 C20orf78Q9BR46 151 aa13.05□□□□□ -0.32
TMEM53-205ENST00000372244 PRSS1P07477 247 aa13.04□□□□□ -0.32
TMEM53-205ENST00000372244 CKS2P33552 79 aa13.04□□□□□ -0.32
TMEM53-205ENST00000372244 RNASEKQ6P5S7 137 aaKnown RBP13.04□□□□□ -0.32
TMEM53-205ENST00000372244 RPL32P62910 135 aaKnown RBP13.04□□□□□ -0.32
TMEM53-205ENST00000372244 LINC01620Q4KN68 170 aa13.04□□□□□ -0.32
TMEM53-205ENST00000372244 MRPL52Q86TS9 123 aaKnown RBP13.04□□□□□ -0.32
TMEM53-205ENST00000372244 FAT1Q14517 4588 aa13.03□□□□□ -0.32
TMEM53-205ENST00000372244 TMEM218A2RU14 115 aa13.03□□□□□ -0.32
TMEM53-205ENST00000372244 ADCYAP1P18509 176 aa13.02□□□□□ -0.33
TMEM53-205ENST00000372244 DGAT2L7PQ6IED9 249 aa13.02□□□□□ -0.33
TMEM53-205ENST00000372244 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.33
TMEM53-205ENST00000372244 KIR2DL4Q99706 377 aa13.02□□□□□ -0.33
TMEM53-205ENST00000372244 C7orf77A4D0Y5 90 aa13.01□□□□□ -0.33
TMEM53-205ENST00000372244 TNFRSF6BO95407 300 aa13.01□□□□□ -0.33
TMEM53-205ENST00000372244 PPBPP02775 128 aa13.01□□□□□ -0.33
TMEM53-205ENST00000372244 D6R8Y8 96 aa13□□□□□ -0.33
TMEM53-205ENST00000372244 FCER1GP30273 86 aa13□□□□□ -0.33
TMEM53-205ENST00000372244 OR5A1Q8NGJ0 315 aa13□□□□□ -0.33
TMEM53-205ENST00000372244 TMEM101Q96IK0 257 aa13□□□□□ -0.33
TMEM53-205ENST00000372244 BTF3L4Q96K17 158 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms