RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SCXQ7RTU7 201 aa12.31□□□□□ -0.44
TMEM53-201ENST00000372235 DEFB104AQ8WTQ1 72 aa12.31□□□□□ -0.44
TMEM53-201ENST00000372235 EIF5A2Q9GZV4 153 aaKnown RBP12.3□□□□□ -0.44
TMEM53-201ENST00000372235 H7C423 109 aa12.29□□□□□ -0.44
TMEM53-201ENST00000372235 FOXA3P55318 350 aaPredicted RBP12.29□□□□□ -0.44
TMEM53-201ENST00000372235 LINC01620Q4KN68 170 aa12.29□□□□□ -0.44
TMEM53-201ENST00000372235 CLPSL2Q6UWE3 100 aa12.29□□□□□ -0.44
TMEM53-201ENST00000372235 C20orf203Q8NBC4 194 aa12.29□□□□□ -0.44
TMEM53-201ENST00000372235 hCG_2014768A0A024R1R8 64 aa12.28□□□□□ -0.44
TMEM53-201ENST00000372235 C9orf163Q8N9P6 203 aa12.28□□□□□ -0.44
TMEM53-201ENST00000372235 GATD1Q8NB37 220 aa12.28□□□□□ -0.44
TMEM53-201ENST00000372235 FAM231BA6NCW3 169 aa12.27□□□□□ -0.45
TMEM53-201ENST00000372235 PRSS1P07477 247 aa12.27□□□□□ -0.45
TMEM53-201ENST00000372235 CEBPGP53567 150 aa12.27□□□□□ -0.45
TMEM53-201ENST00000372235 GTSF1Q8WW33 167 aa12.27□□□□□ -0.45
TMEM53-201ENST00000372235 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
TMEM53-201ENST00000372235 AP5S1Q9NUS5 200 aa12.27□□□□□ -0.45
TMEM53-201ENST00000372235 FAT1Q14517 4588 aa12.26□□□□□ -0.45
TMEM53-201ENST00000372235 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.26□□□□□ -0.45
TMEM53-201ENST00000372235 AMMECR1LQ6DCA0 310 aa12.26□□□□□ -0.45
TMEM53-201ENST00000372235 CFAP161Q6P656 301 aa12.26□□□□□ -0.45
TMEM53-201ENST00000372235 KRTAP26-1Q6PEX3 210 aa12.26□□□□□ -0.45
TMEM53-201ENST00000372235 CIRBP-AS1Q8TBR5 109 aa12.26□□□□□ -0.45
TMEM53-201ENST00000372235 SMIM7Q9BQ49 75 aa12.26□□□□□ -0.45
TMEM53-201ENST00000372235 IGLV4-60A0A075B6I1 120 aa12.25□□□□□ -0.45
TMEM53-201ENST00000372235 IGLV10-54A0A075B6I4 117 aa12.25□□□□□ -0.45
TMEM53-201ENST00000372235 ZNF727A8MUV8 499 aa12.24□□□□□ -0.45
TMEM53-201ENST00000372235 J3QL48 77 aa12.24□□□□□ -0.45
TMEM53-201ENST00000372235 APCSP02743 223 aa12.24□□□□□ -0.45
TMEM53-201ENST00000372235 CNBPP62633 177 aaKnown RBP12.24□□□□□ -0.45
TMEM53-201ENST00000372235 TSKUQ8WUA8 353 aa12.24□□□□□ -0.45
TMEM53-201ENST00000372235 VPS13BQ7Z7G8 4022 aa12.23□□□□□ -0.45
TMEM53-201ENST00000372235 TRAV26-2A0A0B4J265 109 aa12.23□□□□□ -0.45
TMEM53-201ENST00000372235 A0A1B0GUT8 65 aa12.23□□□□□ -0.45
TMEM53-201ENST00000372235 hDV102S1A0JD36 115 aa12.23□□□□□ -0.45
TMEM53-201ENST00000372235 I3L3M4 83 aa12.23□□□□□ -0.45
TMEM53-201ENST00000372235 ZNF25P17030 456 aaPredicted RBP12.23□□□□□ -0.45
TMEM53-201ENST00000372235 LINC01551Q86U37 167 aa12.23□□□□□ -0.45
TMEM53-201ENST00000372235 OSTCQ9NRP0 149 aa12.23□□□□□ -0.45
TMEM53-201ENST00000372235 TRBV6-5A0A0K0K1A5 114 aa12.22□□□□□ -0.45
TMEM53-201ENST00000372235 SDHAF1A6NFY7 115 aa12.22□□□□□ -0.45
TMEM53-201ENST00000372235 FAM74A3Q4VXF1 159 aa12.22□□□□□ -0.45
TMEM53-201ENST00000372235 PPP1R17O96001 155 aa12.21□□□□□ -0.45
TMEM53-201ENST00000372235 PMCHP20382 165 aa12.21□□□□□ -0.45
TMEM53-201ENST00000372235 BTF3L4Q96K17 158 aa12.21□□□□□ -0.45
TMEM53-201ENST00000372235 TMEM191AQ9H0A3 160 aa12.21□□□□□ -0.45
TMEM53-201ENST00000372235 DNAH8Q96JB1 4490 aa12.2□□□□□ -0.46
TMEM53-201ENST00000372235 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
TMEM53-201ENST00000372235 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
TMEM53-201ENST00000372235 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
TMEM53-201ENST00000372235 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
TMEM53-201ENST00000372235 MRAP2Q96G30 205 aa12.2□□□□□ -0.46
TMEM53-201ENST00000372235 TMEM101Q96IK0 257 aa12.2□□□□□ -0.46
TMEM53-201ENST00000372235 ST20Q9HBF5 79 aa12.2□□□□□ -0.46
TMEM53-201ENST00000372235 KRTAP29-1A8MX34 341 aaPredicted RBP12.19□□□□□ -0.46
TMEM53-201ENST00000372235 SRP19P09132 144 aaKnown RBP12.18□□□□□ -0.46
TMEM53-201ENST00000372235 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
TMEM53-201ENST00000372235 RIGQ13278 110 aa12.18□□□□□ -0.46
TMEM53-201ENST00000372235 SDIM1Q6ZPB5 146 aa12.18□□□□□ -0.46
TMEM53-201ENST00000372235 FGF6P10767 208 aa12.17□□□□□ -0.46
TMEM53-201ENST00000372235 TMEM241Q24JQ0 296 aa12.17□□□□□ -0.46
TMEM53-201ENST00000372235 RNF185Q96GF1 192 aa12.17□□□□□ -0.46
TMEM53-201ENST00000372235 SMDT1Q9H4I9 107 aa12.17□□□□□ -0.46
TMEM53-201ENST00000372235 SRRM2Q9UQ35 2752 aaKnown RBP12.17□□□□□ -0.46
TMEM53-201ENST00000372235 GAGE12HA6NDE8 117 aa12.16□□□□□ -0.46
TMEM53-201ENST00000372235 PKIGQ9Y2B9 76 aa12.16□□□□□ -0.46
TMEM53-201ENST00000372235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.15□□□□□ -0.46
TMEM53-201ENST00000372235 IGKV2-29A2NJV5 120 aaPredicted RBP12.15□□□□□ -0.46
TMEM53-201ENST00000372235 RPL37AP61513 92 aaKnown RBP12.15□□□□□ -0.46
TMEM53-201ENST00000372235 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.46
TMEM53-201ENST00000372235 NAT8BQ9UHF3 227 aa12.15□□□□□ -0.46
TMEM53-201ENST00000372235 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
TMEM53-201ENST00000372235 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
TMEM53-201ENST00000372235 TRBV27A0A0K0K1C4 114 aa12.14□□□□□ -0.47
TMEM53-201ENST00000372235 OXTP01178 125 aa12.14□□□□□ -0.47
TMEM53-201ENST00000372235 RAB4AP20338 218 aa12.14□□□□□ -0.47
TMEM53-201ENST00000372235 PEA15Q15121 130 aa12.14□□□□□ -0.47
TMEM53-201ENST00000372235 CHCHD10Q8WYQ3 142 aaPredicted RBP12.14□□□□□ -0.47
TMEM53-201ENST00000372235 DPH3Q96FX2 82 aa12.14□□□□□ -0.47
TMEM53-201ENST00000372235 VCYO14598 125 aa12.13□□□□□ -0.47
TMEM53-201ENST00000372235 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
TMEM53-201ENST00000372235 ISOC2Q96AB3 205 aa12.13□□□□□ -0.47
TMEM53-201ENST00000372235 V9GYV3 84 aa12.13□□□□□ -0.47
TMEM53-201ENST00000372235 A0A1B0GW15 77 aa12.12□□□□□ -0.47
TMEM53-201ENST00000372235 PPP1R2P9O14990 202 aa12.12□□□□□ -0.47
TMEM53-201ENST00000372235 ESDP10768 282 aa12.12□□□□□ -0.47
TMEM53-201ENST00000372235 RPS10P46783 165 aaKnown RBP12.12□□□□□ -0.47
TMEM53-201ENST00000372235 POLR2KP53803 58 aaKnown RBP12.12□□□□□ -0.47
TMEM53-201ENST00000372235 MRPL52Q86TS9 123 aaKnown RBP12.12□□□□□ -0.47
TMEM53-201ENST00000372235 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
TMEM53-201ENST00000372235 FLG2Q5D862 2391 aaPredicted RBP12.11□□□□□ -0.47
TMEM53-201ENST00000372235 C7orf77A4D0Y5 90 aa12.11□□□□□ -0.47
TMEM53-201ENST00000372235 SS18Q15532 418 aa12.11□□□□□ -0.47
TMEM53-201ENST00000372235 NUP35Q8NFH5 326 aa12.11□□□□□ -0.47
TMEM53-201ENST00000372235 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
TMEM53-201ENST00000372235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.11□□□□□ -0.47
TMEM53-201ENST00000372235 TCAPO15273 167 aa12.1□□□□□ -0.47
TMEM53-201ENST00000372235 CCL25O15444 150 aa12.1□□□□□ -0.47
TMEM53-201ENST00000372235 TSHBP01222 138 aa12.1□□□□□ -0.47
TMEM53-201ENST00000372235 FCER1GP30273 86 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms