RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 TRGV11A0A075B6L2 103 aa12.65□□□□□ -0.38
VEGFA-205ENST00000372067 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
VEGFA-205ENST00000372067 J3QKU1 62 aa12.65□□□□□ -0.38
VEGFA-205ENST00000372067 SCGB1D4Q6XE38 83 aa12.65□□□□□ -0.38
VEGFA-205ENST00000372067 ODF3Q96PU9 254 aa12.65□□□□□ -0.38
VEGFA-205ENST00000372067 H7C1H1 209 aa12.65□□□□□ -0.38
VEGFA-205ENST00000372067 CSMD2Q7Z408 3487 aa12.65□□□□□ -0.38
VEGFA-205ENST00000372067 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
VEGFA-205ENST00000372067 CHD6Q8TD26 2715 aa12.65□□□□□ -0.39
VEGFA-205ENST00000372067 UBE2D3P61077 147 aa12.65□□□□□ -0.39
VEGFA-205ENST00000372067 UBE2D2P62837 147 aa12.65□□□□□ -0.39
VEGFA-205ENST00000372067 Q6ZSV7 163 aa12.65□□□□□ -0.39
VEGFA-205ENST00000372067 VCYO14598 125 aa12.64□□□□□ -0.39
VEGFA-205ENST00000372067 TMEM262E9PQX1 116 aa12.64□□□□□ -0.39
VEGFA-205ENST00000372067 RPL39P62891 51 aaKnown RBP12.64□□□□□ -0.39
VEGFA-205ENST00000372067 NSUN5P1Q3KNT7 163 aa12.64□□□□□ -0.39
VEGFA-205ENST00000372067 TMEM170BQ5T4T1 132 aa12.64□□□□□ -0.39
VEGFA-205ENST00000372067 TMEM126AQ9H061 195 aa12.64□□□□□ -0.39
VEGFA-205ENST00000372067 IGLV2-18A0A075B6J9 118 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 IGHV3-16A0A0C4DH30 117 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 LGALS9O00182 355 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 VPS13CQ709C8 3753 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 TAL2Q16559 108 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 Q6Q795 121 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 FBN2P35556 2912 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 MED14OSP0DP75 135 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 HECTD1Q9ULT8 2610 aa12.63□□□□□ -0.39
VEGFA-205ENST00000372067 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
VEGFA-205ENST00000372067 STHQ8IWL8 128 aa12.62□□□□□ -0.39
VEGFA-205ENST00000372067 KLK5Q9Y337 293 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-205ENST00000372067 MUC4Q99102 2169 aa12.62□□□□□ -0.39
VEGFA-205ENST00000372067 F8VRH5 84 aa12.61□□□□□ -0.39
VEGFA-205ENST00000372067 FAM19A4Q96LR4 140 aa12.61□□□□□ -0.39
VEGFA-205ENST00000372067 HELZ2Q9BYK8 2649 aaKnown RBP12.61□□□□□ -0.39
VEGFA-205ENST00000372067 PLNP26678 52 aa12.61□□□□□ -0.39
VEGFA-205ENST00000372067 BAALCQ8WXS3 180 aa12.61□□□□□ -0.39
VEGFA-205ENST00000372067 CD28P10747 220 aa12.61□□□□□ -0.39
VEGFA-205ENST00000372067 FSHBP01225 129 aa12.6□□□□□ -0.39
VEGFA-205ENST00000372067 SRSF9Q13242 221 aaKnown RBP eCLIP12.6□□□□□ -0.39
VEGFA-205ENST00000372067 C4orf3Q8WVX3 66 aa12.6□□□□□ -0.39
VEGFA-205ENST00000372067 CR1P17927 2039 aa12.6□□□□□ -0.39
VEGFA-205ENST00000372067 A8MWV9 139 aa12.6□□□□□ -0.39
VEGFA-205ENST00000372067 MYMXA0A1B0GTQ4 84 aa12.59□□□□□ -0.39
VEGFA-205ENST00000372067 CCL24O00175 119 aa12.59□□□□□ -0.39
VEGFA-205ENST00000372067 CITED2Q99967 270 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-205ENST00000372067 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
VEGFA-205ENST00000372067 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 TOMM6Q96B49 74 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 P0DMU3 169 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 FAM231AP0DMU4 169 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 FAM231CP0DMU5 169 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 HERVK_113P61574 105 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 C15orf53Q8NAA6 179 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 TMEM101Q96IK0 257 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 H3BMM0 161 aa12.58□□□□□ -0.4
VEGFA-205ENST00000372067 MAP6D1Q9H9H5 199 aa12.57□□□□□ -0.4
VEGFA-205ENST00000372067 IGHV3-53P01767 116 aa12.57□□□□□ -0.4
VEGFA-205ENST00000372067 TRPT1Q86TN4 253 aaKnown RBP12.57□□□□□ -0.4
VEGFA-205ENST00000372067 MXRA5Q9NR99 2828 aa12.57□□□□□ -0.4
VEGFA-205ENST00000372067 PROK1P58294 105 aa12.57□□□□□ -0.4
VEGFA-205ENST00000372067 ZNF415Q09FC8 603 aa12.57□□□□□ -0.4
VEGFA-205ENST00000372067 OPRPNQ99935 248 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-205ENST00000372067 ZNF815PA8K554 130 aa12.56□□□□□ -0.4
VEGFA-205ENST00000372067 C9JAW5 83 aa12.56□□□□□ -0.4
VEGFA-205ENST00000372067 RPL35AP18077 110 aaKnown RBP12.56□□□□□ -0.4
VEGFA-205ENST00000372067 EDA2RQ9HAV5 297 aa12.56□□□□□ -0.4
VEGFA-205ENST00000372067 APCP25054 2843 aa12.56□□□□□ -0.4
VEGFA-205ENST00000372067 INSP01308 110 aa12.56□□□□□ -0.4
VEGFA-205ENST00000372067 UBE2D1P51668 147 aa12.56□□□□□ -0.4
VEGFA-205ENST00000372067 DEFB114Q30KQ6 69 aa12.56□□□□□ -0.4
VEGFA-205ENST00000372067 ZFHX3Q15911 3703 aa12.56□□□□□ -0.4
VEGFA-205ENST00000372067 IGHV3-38A0A0C4DH36 116 aa12.55□□□□□ -0.4
VEGFA-205ENST00000372067 PRADC1Q9BSG0 188 aa12.55□□□□□ -0.4
VEGFA-205ENST00000372067 ESM1Q9NQ30 184 aa12.54□□□□□ -0.4
VEGFA-205ENST00000372067 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
VEGFA-205ENST00000372067 RNASE13Q5GAN3 156 aaKnown RBP12.54□□□□□ -0.4
VEGFA-205ENST00000372067 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
VEGFA-205ENST00000372067 SMR3AQ99954 134 aa12.53□□□□□ -0.4
VEGFA-205ENST00000372067 UBR5O95071 2799 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-205ENST00000372067 CRYGDP07320 174 aa12.53□□□□□ -0.4
VEGFA-205ENST00000372067 DGAT2L7PQ6IED9 249 aa12.53□□□□□ -0.4
VEGFA-205ENST00000372067 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
VEGFA-205ENST00000372067 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
VEGFA-205ENST00000372067 PMVKQ15126 192 aa12.53□□□□□ -0.4
VEGFA-205ENST00000372067 RBMY1FQ15415 496 aaKnown RBP12.53□□□□□ -0.4
VEGFA-205ENST00000372067 KIF25-AS1Q9Y6Z4 181 aa12.53□□□□□ -0.4
VEGFA-205ENST00000372067 TEX49A0A1B0GTD5 131 aa12.52□□□□□ -0.4
VEGFA-205ENST00000372067 KRTAP1-3Q8IUG1 177 aa12.52□□□□□ -0.4
VEGFA-205ENST00000372067 SLC25A20O43772 301 aa12.52□□□□□ -0.41
VEGFA-205ENST00000372067 CEMP1Q6PRD7 247 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-205ENST00000372067 PLA2G2AP14555 144 aa12.51□□□□□ -0.41
VEGFA-205ENST00000372067 LINC00315P59091 139 aa12.51□□□□□ -0.41
VEGFA-205ENST00000372067 NEXN-AS1Q8NBZ9 246 aa12.51□□□□□ -0.41
VEGFA-205ENST00000372067 SPANXA1Q9NS26 97 aa12.51□□□□□ -0.41
VEGFA-205ENST00000372067 I3L3M4 83 aa12.51□□□□□ -0.41
VEGFA-205ENST00000372067 M0QY20 66 aa12.51□□□□□ -0.41
VEGFA-205ENST00000372067 HERVK_113P63121 156 aa12.51□□□□□ -0.41
VEGFA-205ENST00000372067 RBMY1BA6NDE4 496 aaKnown RBP12.51□□□□□ -0.41
VEGFA-205ENST00000372067 RBMY1EA6NEQ0 496 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms