RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 HBBP68871 147 aa12.35□□□□□ -0.43
CHTOP-202ENST00000368687 MIAQ16674 131 aa12.35□□□□□ -0.43
CHTOP-202ENST00000368687 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
CHTOP-202ENST00000368687 RPL39LQ96EH5 51 aaKnown RBP12.35□□□□□ -0.43
CHTOP-202ENST00000368687 IGKV2D-24A0A075B6R9 120 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 LRCOL1A6NCL2 159 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 H7C423 109 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 I3L3M4 83 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 RBX1P62877 108 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 GAGE6Q13070 117 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 RNF185Q96GF1 192 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 C1orf43Q9BWL3 253 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 KRTAP17-1Q9BYP8 105 aa12.34□□□□□ -0.43
CHTOP-202ENST00000368687 LINC00862A6NCI5 91 aa12.33□□□□□ -0.44
CHTOP-202ENST00000368687 APCSP02743 223 aa12.33□□□□□ -0.44
CHTOP-202ENST00000368687 CAMPP49913 170 aa12.33□□□□□ -0.44
CHTOP-202ENST00000368687 FAM104BQ5XKR9 115 aa12.33□□□□□ -0.44
CHTOP-202ENST00000368687 PRR34Q9NV39 138 aa12.33□□□□□ -0.44
CHTOP-202ENST00000368687 PMCHP20382 165 aa12.32□□□□□ -0.44
CHTOP-202ENST00000368687 Q8N976 141 aa12.32□□□□□ -0.44
CHTOP-202ENST00000368687 TRBV27A0A0K0K1C4 114 aa12.31□□□□□ -0.44
CHTOP-202ENST00000368687 TMEM218A2RU14 115 aa12.31□□□□□ -0.44
CHTOP-202ENST00000368687 CDK2AP2O75956 126 aa12.31□□□□□ -0.44
CHTOP-202ENST00000368687 Q8N814 137 aa12.31□□□□□ -0.44
CHTOP-202ENST00000368687 TMEM70Q9BUB7 260 aa12.31□□□□□ -0.44
CHTOP-202ENST00000368687 A0A1B0GXF2 115 aa12.3□□□□□ -0.44
CHTOP-202ENST00000368687 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
CHTOP-202ENST00000368687 ENHOQ6UWT2 76 aa12.3□□□□□ -0.44
CHTOP-202ENST00000368687 TRAV8-4A0A0B4J246 113 aa12.29□□□□□ -0.44
CHTOP-202ENST00000368687 PPBPP02775 128 aa12.29□□□□□ -0.44
CHTOP-202ENST00000368687 ZNF25P17030 456 aaPredicted RBP12.29□□□□□ -0.44
CHTOP-202ENST00000368687 LINC00269Q8N2A0 174 aa12.29□□□□□ -0.44
CHTOP-202ENST00000368687 SEC11CQ9BY50 192 aa12.29□□□□□ -0.44
CHTOP-202ENST00000368687 LRP1BQ9NZR2 4599 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 VCYO14598 125 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 TCAPO15273 167 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 CKS2P33552 79 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
CHTOP-202ENST00000368687 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
CHTOP-202ENST00000368687 C14orf177Q52M58 125 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 AMMECR1LQ6DCA0 310 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 COMMD7Q86VX2 200 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 IMMP2LQ96T52 175 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
CHTOP-202ENST00000368687 RYR1P21817 5038 aa12.27□□□□□ -0.44
CHTOP-202ENST00000368687 IGLV5-52A0A0A0MRZ9 124 aa12.27□□□□□ -0.45
CHTOP-202ENST00000368687 RPS10P46783 165 aaKnown RBP12.27□□□□□ -0.45
CHTOP-202ENST00000368687 REG3AQ06141 175 aa12.27□□□□□ -0.45
CHTOP-202ENST00000368687 SMAGPQ0VAQ4 97 aa12.27□□□□□ -0.45
CHTOP-202ENST00000368687 MRPL51Q4U2R6 128 aaKnown RBP12.27□□□□□ -0.45
CHTOP-202ENST00000368687 BTF3L4Q96K17 158 aa12.27□□□□□ -0.45
CHTOP-202ENST00000368687 CTDSP1Q9GZU7 261 aa12.27□□□□□ -0.45
CHTOP-202ENST00000368687 TRBV24-1A0A075B6N3 115 aa12.26□□□□□ -0.45
CHTOP-202ENST00000368687 PHOX2AO14813 284 aa12.26□□□□□ -0.45
CHTOP-202ENST00000368687 RPL32P62910 135 aaKnown RBP12.26□□□□□ -0.45
CHTOP-202ENST00000368687 NRACQ8N912 160 aa12.26□□□□□ -0.45
CHTOP-202ENST00000368687 C20orf203Q8NBC4 194 aa12.26□□□□□ -0.45
CHTOP-202ENST00000368687 PCLOQ9Y6V0 5065 aa12.25□□□□□ -0.45
CHTOP-202ENST00000368687 GAS8-AS1O95177 125 aa12.25□□□□□ -0.45
CHTOP-202ENST00000368687 TSHBP01222 138 aa12.25□□□□□ -0.45
CHTOP-202ENST00000368687 FCER1GP30273 86 aa12.25□□□□□ -0.45
CHTOP-202ENST00000368687 IGLV4-60A0A075B6I1 120 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 C7orf77A4D0Y5 90 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 ADCYAP1P18509 176 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 GCSHP23434 173 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 HSPG2P98160 4391 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 MAPKAPK5-AS1Q8N8E1 139 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 BAALCQ8WXS3 180 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 TMEM101Q96IK0 257 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 TMEM242Q9NWH2 141 aa12.24□□□□□ -0.45
CHTOP-202ENST00000368687 TRAV9-1A0A075B6T8 112 aa12.23□□□□□ -0.45
CHTOP-202ENST00000368687 SMKR1H3BMG3 65 aa12.23□□□□□ -0.45
CHTOP-202ENST00000368687 FGF6P10767 208 aa12.23□□□□□ -0.45
CHTOP-202ENST00000368687 ESDP10768 282 aa12.23□□□□□ -0.45
CHTOP-202ENST00000368687 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
CHTOP-202ENST00000368687 CLPSL2Q6UWE3 100 aa12.23□□□□□ -0.45
CHTOP-202ENST00000368687 ORMDL3Q8N138 153 aa12.23□□□□□ -0.45
CHTOP-202ENST00000368687 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
CHTOP-202ENST00000368687 LAMTOR2Q9Y2Q5 125 aa12.23□□□□□ -0.45
CHTOP-202ENST00000368687 D6R8Y8 96 aa12.22□□□□□ -0.45
CHTOP-202ENST00000368687 TMEM18Q96B42 140 aa12.22□□□□□ -0.45
CHTOP-202ENST00000368687 DNAH5Q8TE73 4624 aa12.22□□□□□ -0.45
CHTOP-202ENST00000368687 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.21□□□□□ -0.45
CHTOP-202ENST00000368687 IGKV2-29A2NJV5 120 aaPredicted RBP12.21□□□□□ -0.45
CHTOP-202ENST00000368687 LECT2O14960 151 aa12.21□□□□□ -0.45
CHTOP-202ENST00000368687 TNFRSF6BO95407 300 aa12.21□□□□□ -0.45
CHTOP-202ENST00000368687 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
CHTOP-202ENST00000368687 MRPL52Q86TS9 123 aaKnown RBP12.21□□□□□ -0.45
CHTOP-202ENST00000368687 WFDC2Q14508 124 aa12.2□□□□□ -0.46
CHTOP-202ENST00000368687 OR5A1Q8NGJ0 315 aa12.2□□□□□ -0.46
CHTOP-202ENST00000368687 S100PP25815 95 aa12.19□□□□□ -0.46
CHTOP-202ENST00000368687 RHEBQ15382 184 aa12.19□□□□□ -0.46
CHTOP-202ENST00000368687 C10orf91Q5T1B1 145 aa12.19□□□□□ -0.46
CHTOP-202ENST00000368687 SMIM2Q9BVW6 85 aa12.19□□□□□ -0.46
CHTOP-202ENST00000368687 CARHSP1Q9Y2V2 147 aaKnown RBP12.19□□□□□ -0.46
CHTOP-202ENST00000368687 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
CHTOP-202ENST00000368687 CLRN3Q8NCR9 226 aa12.18□□□□□ -0.46
CHTOP-202ENST00000368687 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms