RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 GTSF1Q8WW33 167 aa8.86□□□□□ -0.99
TNFRSF1A-202ENST00000366159 BLOC1S1P78537 153 aa8.85□□□□□ -0.99
TNFRSF1A-202ENST00000366159 ALKAL2Q6UX46 152 aa8.85□□□□□ -0.99
TNFRSF1A-202ENST00000366159 GATD1Q8NB37 220 aa8.85□□□□□ -0.99
TNFRSF1A-202ENST00000366159 CIRBP-AS1Q8TBR5 109 aa8.85□□□□□ -0.99
TNFRSF1A-202ENST00000366159 PKHD1L1Q86WI1 4243 aa8.85□□□□□ -0.99
TNFRSF1A-202ENST00000366159 IGLV4-60A0A075B6I1 120 aa8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 PLA2G1BP04054 148 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 REG3AQ06141 175 aa8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 TWIST1Q15672 202 aa8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 DGAT2L7PQ6IED9 249 aa8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 CLPSL2Q6UWE3 100 aa8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 FAM231DQ6ZW35 169 aa8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 GFRA4Q9GZZ7 299 aa8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-202ENST00000366159 HLA-DQA1P01909 254 aa8.83□□□□□ -1
TNFRSF1A-202ENST00000366159 FOXA3P55318 350 aaPredicted RBP8.83□□□□□ -1
TNFRSF1A-202ENST00000366159 TMEM243Q9BU79 118 aa8.83□□□□□ -1
TNFRSF1A-202ENST00000366159 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
TNFRSF1A-202ENST00000366159 TRAV8-4A0A0B4J246 113 aa8.82□□□□□ -1
TNFRSF1A-202ENST00000366159 NDUFS6O75380 124 aaKnown RBP8.82□□□□□ -1
TNFRSF1A-202ENST00000366159 GHRHP01286 108 aa8.82□□□□□ -1
TNFRSF1A-202ENST00000366159 C9orf163Q8N9P6 203 aa8.82□□□□□ -1
TNFRSF1A-202ENST00000366159 hCG_2014768A0A024R1R8 64 aa8.81□□□□□ -1
TNFRSF1A-202ENST00000366159 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
TNFRSF1A-202ENST00000366159 DEFB104AQ8WTQ1 72 aa8.81□□□□□ -1
TNFRSF1A-202ENST00000366159 IGLV10-54A0A075B6I4 117 aa8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 GATCO43716 136 aaKnown RBP8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 COTL1Q14019 142 aa8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 CT83Q5H943 113 aa8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 CLRN3Q8NCR9 226 aa8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 A8MWL6 223 aa8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 AMTP48728 403 aa8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 SDIM1Q6ZPB5 146 aa8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
TNFRSF1A-202ENST00000366159 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
TNFRSF1A-202ENST00000366159 LINC01551Q86U37 167 aa8.79□□□□□ -1
TNFRSF1A-202ENST00000366159 FAM210AQ96ND0 272 aa8.79□□□□□ -1
TNFRSF1A-202ENST00000366159 TRBV6-5A0A0K0K1A5 114 aa8.78□□□□□ -1
TNFRSF1A-202ENST00000366159 PANO1I0J062 215 aa8.78□□□□□ -1
TNFRSF1A-202ENST00000366159 NCR2O95944 276 aa8.78□□□□□ -1
TNFRSF1A-202ENST00000366159 SLPIP03973 132 aa8.78□□□□□ -1
TNFRSF1A-202ENST00000366159 TEX261Q6UWH6 196 aa8.78□□□□□ -1
TNFRSF1A-202ENST00000366159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.78□□□□□ -1
TNFRSF1A-202ENST00000366159 FAM231BA6NCW3 169 aa8.77□□□□□ -1.01
TNFRSF1A-202ENST00000366159 H7C423 109 aa8.77□□□□□ -1.01
TNFRSF1A-202ENST00000366159 UBE2L6O14933 153 aa8.77□□□□□ -1.01
TNFRSF1A-202ENST00000366159 GAS8-AS1O95177 125 aa8.77□□□□□ -1.01
TNFRSF1A-202ENST00000366159 SRP19P09132 144 aaKnown RBP8.77□□□□□ -1.01
TNFRSF1A-202ENST00000366159 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
TNFRSF1A-202ENST00000366159 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
TNFRSF1A-202ENST00000366159 SDHAF1A6NFY7 115 aa8.76□□□□□ -1.01
TNFRSF1A-202ENST00000366159 TSKUQ8WUA8 353 aa8.76□□□□□ -1.01
TNFRSF1A-202ENST00000366159 SMIM7Q9BQ49 75 aa8.76□□□□□ -1.01
TNFRSF1A-202ENST00000366159 EIF5A2Q9GZV4 153 aaKnown RBP8.76□□□□□ -1.01
TNFRSF1A-202ENST00000366159 A0A1B0GVG6 124 aa8.75□□□□□ -1.01
TNFRSF1A-202ENST00000366159 CEBPGP53567 150 aa8.75□□□□□ -1.01
TNFRSF1A-202ENST00000366159 C15orf56Q8N910 161 aa8.75□□□□□ -1.01
TNFRSF1A-202ENST00000366159 RNF185Q96GF1 192 aa8.75□□□□□ -1.01
TNFRSF1A-202ENST00000366159 TMEM191AQ9H0A3 160 aa8.75□□□□□ -1.01
TNFRSF1A-202ENST00000366159 OSTCQ9NRP0 149 aa8.75□□□□□ -1.01
TNFRSF1A-202ENST00000366159 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.74□□□□□ -1.01
TNFRSF1A-202ENST00000366159 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
TNFRSF1A-202ENST00000366159 hDV102S1A0JD36 115 aa8.74□□□□□ -1.01
TNFRSF1A-202ENST00000366159 IGKV2-29A2NJV5 120 aaPredicted RBP8.74□□□□□ -1.01
TNFRSF1A-202ENST00000366159 ZNF727A8MUV8 499 aa8.74□□□□□ -1.01
TNFRSF1A-202ENST00000366159 HIGD1CA8MV81 97 aa8.74□□□□□ -1.01
TNFRSF1A-202ENST00000366159 ESDP10768 282 aa8.74□□□□□ -1.01
TNFRSF1A-202ENST00000366159 HMCN2Q8NDA2 5059 aa8.74□□□□□ -1.01
TNFRSF1A-202ENST00000366159 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
TNFRSF1A-202ENST00000366159 I3L3M4 83 aa8.73□□□□□ -1.01
TNFRSF1A-202ENST00000366159 APCSP02743 223 aa8.73□□□□□ -1.01
TNFRSF1A-202ENST00000366159 FGF6P10767 208 aa8.73□□□□□ -1.01
TNFRSF1A-202ENST00000366159 RAB4AP20338 218 aa8.73□□□□□ -1.01
TNFRSF1A-202ENST00000366159 POLR2KP53803 58 aaKnown RBP8.73□□□□□ -1.01
TNFRSF1A-202ENST00000366159 V9GYV3 84 aa8.73□□□□□ -1.01
TNFRSF1A-202ENST00000366159 TSHBP01222 138 aa8.72□□□□□ -1.01
TNFRSF1A-202ENST00000366159 RPS10P46783 165 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-202ENST00000366159 IGHV3-64A0A075B6Q5 118 aa8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 TRBV27A0A0K0K1C4 114 aa8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 C9JQL5 133 aa8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 ZNF25P17030 456 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 PMCHP20382 165 aa8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 AMMECR1LQ6DCA0 310 aa8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 CHCHD10Q8WYQ3 142 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 ISOC2Q96AB3 205 aa8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 BORCS7Q96B45 105 aa8.71□□□□□ -1.02
TNFRSF1A-202ENST00000366159 OXTP01178 125 aa8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 RPL37AP61513 92 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 RPL23P62829 140 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 RNASEKQ6P5S7 137 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 MRPL52Q86TS9 123 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 AMN1Q8IY45 258 aa8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 NUP35Q8NFH5 326 aa8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 OR5A1Q8NGJ0 315 aa8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 MRAP2Q96G30 205 aa8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 ST20Q9HBF5 79 aa8.7□□□□□ -1.02
TNFRSF1A-202ENST00000366159 AP5S1Q9NUS5 200 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms