RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 RPL19P84098 196 aaKnown RBP-1.43□□□□□ -2.64
MIR539-201ENST00000365690 HSD17B12Q53GQ0 312 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 RPL7L1Q6DKI1 246 aaKnown RBP-1.43□□□□□ -2.64
MIR539-201ENST00000365690 LINC00305Q7Z4B0 112 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 FDCSPQ8NFU4 85 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 BORCS8Q96FH0 119 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 PAIP2Q9BPZ3 127 aaKnown RBP-1.43□□□□□ -2.64
MIR539-201ENST00000365690 NCOR1P1Q9H4R4 102 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 OTORQ9NRC9 128 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 RPRMQ9NS64 109 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 NOP16Q9Y3C1 178 aaKnown RBP-1.43□□□□□ -2.64
MIR539-201ENST00000365690 PIK3C2AO00443 1686 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 PIK3C2GO75747 1445 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 RAD50Q92878 1312 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 PTPRMP28827 1452 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 SHANK2Q9UPX8 1470 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 UBR2Q8IWV8 1755 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 PDE4DIPQ5VU43 2346 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 MED23Q9ULK4 1368 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 TRAV13-1A0A0B4J241 112 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 TRPC5OSA6NMA1 111 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 H7BZZ5 65 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 DEXIO95424 95 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 APOC3P02656 99 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 SDC2P34741 201 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 SRP9P49458 86 aaKnown RBP-1.44□□□□□ -2.64
MIR539-201ENST00000365690 BTG2P78543 158 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 LELP1Q5T871 98 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 CLPSL2Q6UWE3 100 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 BAGE2Q86Y30 109 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 C10orf82Q8WW14 230 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 BTF3L4Q96K17 158 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 SPRR4Q96PI1 79 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 MRPL34Q9BQ48 92 aaKnown RBP-1.44□□□□□ -2.64
MIR539-201ENST00000365690 HIGD1BQ9P298 99 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 METTL1Q9UBP6 276 aaKnown RBP-1.44□□□□□ -2.64
MIR539-201ENST00000365690 V9GYH0 126 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 UHRF1BP1Q6BDS2 1440 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 CD109Q6YHK3 1445 aa-1.44□□□□□ -2.64
MIR539-201ENST00000365690 PCF11O94913 1555 aaKnown RBP-1.44□□□□□ -2.64
MIR539-201ENST00000365690 BORCS7-ASMTA0A0B4J1R7 106 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 G3V2T6 193 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 H7C1C5 153 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 CCL22O00626 93 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 UQCR11O14957 56 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 IFNA17P01571 189 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 CST2P09228 141 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 HIST1H1BP16401 226 aaKnown RBP-1.45□□□□□ -2.64
MIR539-201ENST00000365690 LCN6P62502 163 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 KRTAP19-6Q3LI70 58 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 Q6AWC8 147 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 DCUN1D2Q6PH85 259 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 ATP11AUNQ6ZP68 121 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 STX12Q86Y82 276 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 PTH2Q96A98 100 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 SLC35B3Q9H1N7 401 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 NMNAT1Q9HAN9 279 aaPredicted RBP-1.45□□□□□ -2.64
MIR539-201ENST00000365690 LINC00312Q9Y6C7 94 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 MYH1P12882 1939 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 CCDC141Q6ZP82 1450 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 PATJQ8NI35 1801 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 ZNF236Q9UL36 1845 aa-1.45□□□□□ -2.64
MIR539-201ENST00000365690 REV3LO60673 3130 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 BCORQ6W2J9 1755 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 TECPR2O15040 1411 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 LRRC37A3O60309 1634 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 TRBV7-3A0A075B6L6 115 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-1.46□□□□□ -2.64
MIR539-201ENST00000365690 LOC100506127A0A0U1RQW1 187 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 MGPP08493 103 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 TPPP2P59282 170 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 B2MP61769 119 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 TMEM97Q5BJF2 176 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 ZNF818PQ6ZRF7 136 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 ATP6V0E2Q8NHE4 81 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 TMEM263Q8WUH6 116 aaKnown RBP-1.46□□□□□ -2.64
MIR539-201ENST00000365690 IMP3Q9NV31 184 aaKnown RBP-1.46□□□□□ -2.64
MIR539-201ENST00000365690 USE1Q9NZ43 259 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 GUCA1BQ9UMX6 200 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 SSR3Q9UNL2 185 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 FAM32AQ9Y421 112 aaKnown RBP-1.46□□□□□ -2.64
MIR539-201ENST00000365690 NKTRP30414 1462 aaKnown RBP-1.46□□□□□ -2.64
MIR539-201ENST00000365690 CEP295Q9C0D2 2601 aa-1.46□□□□□ -2.64
MIR539-201ENST00000365690 CEP290O15078 2479 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 TCOF1Q13428 1488 aaKnown RBP-1.47□□□□□ -2.64
MIR539-201ENST00000365690 GABARAPH6UMI1 98 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 J3QLW9 94 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 UQCRQO14949 82 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 CETN3O15182 167 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 HSD11B1P28845 292 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 UBE2G1P62253 170 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 UBA52P62987 128 aaKnown RBP-1.47□□□□□ -2.64
MIR539-201ENST00000365690 GNG5P63218 68 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 C10orf113Q5VZT2 155 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 Q6ZUT4 128 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 NUP35Q8NFH5 326 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 SPTSSBQ8NFR3 76 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 GINS3Q9BRX5 216 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 TPT1P8Q9HAU6 139 aa-1.47□□□□□ -2.64
MIR539-201ENST00000365690 AGPAT3Q9NRZ7 376 aa-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms