RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 DPH3P1Q9H4G8 78 aa5.25□□□□□ -1.57
RNU4-59P-201ENST00000364447 NIT2Q9NQR4 276 aa5.25□□□□□ -1.57
RNU4-59P-201ENST00000364447 BIN3Q9NQY0 253 aa5.25□□□□□ -1.57
RNU4-59P-201ENST00000364447 A0A1B0GUV1 79 aa5.24□□□□□ -1.57
RNU4-59P-201ENST00000364447 RAB19A4D1S5 217 aa5.24□□□□□ -1.57
RNU4-59P-201ENST00000364447 PANO1I0J062 215 aa5.24□□□□□ -1.57
RNU4-59P-201ENST00000364447 NTF3P20783 257 aa5.24□□□□□ -1.57
RNU4-59P-201ENST00000364447 HNRNPA3P51991 378 aaKnown RBP5.24□□□□□ -1.57
RNU4-59P-201ENST00000364447 LYZL1Q6UWQ5 148 aa5.24□□□□□ -1.57
RNU4-59P-201ENST00000364447 PGLYRP4Q96LB8 373 aa5.24□□□□□ -1.57
RNU4-59P-201ENST00000364447 IGKV3OR2-268A0A0C4DH90 116 aa5.23□□□□□ -1.57
RNU4-59P-201ENST00000364447 RNF185Q96GF1 192 aa5.23□□□□□ -1.57
RNU4-59P-201ENST00000364447 GFRA4Q9GZZ7 299 aa5.23□□□□□ -1.57
RNU4-59P-201ENST00000364447 MED9Q9NWA0 146 aa5.23□□□□□ -1.57
RNU4-59P-201ENST00000364447 TRBV20OR9-2A0A075B6H5 130 aa5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 CHTF8P0CG12 524 aa5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 BCL2P10415 239 aa5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 CTRLP40313 264 aa5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 SMCPP49901 116 aaPredicted RBP5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 CIRBPQ14011 172 aaKnown RBP5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 TWIST1Q15672 202 aa5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 AMMECR1LQ6DCA0 310 aa5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 CFAP161Q6P656 301 aa5.22□□□□□ -1.57
RNU4-59P-201ENST00000364447 A0A087WYN8 130 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 TRAV26-2A0A0B4J265 109 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 GAGE12HA6NDE8 117 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 Q6ZRU5 148 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 SMIM15Q7Z3B0 74 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 C9orf62Q8N4C0 152 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 NUDT10Q8NFP7 164 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 SPACA4Q8TDM5 124 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 C7orf33Q8WU49 177 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 NUDT11Q96G61 164 aa5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 RPP21Q9H633 154 aaKnown RBP5.21□□□□□ -1.58
RNU4-59P-201ENST00000364447 LRP1Q07954 4544 aaKnown RBP5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 APCSP02743 223 aa5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 SLPIP03973 132 aa5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 TAGLN2P37802 199 aaKnown RBP5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 HIGD2BQ4VC39 106 aa5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 RNASEKQ6P5S7 137 aaKnown RBP5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 C15orf56Q8N910 161 aa5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 GATD1Q8NB37 220 aa5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 RNASE7Q9H1E1 156 aaKnown RBP5.2□□□□□ -1.58
RNU4-59P-201ENST00000364447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 IGKV2-29A2NJV5 120 aaPredicted RBP5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 NCR2O95944 276 aa5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 RPS10P46783 165 aaKnown RBP5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 COX6A2Q02221 97 aa5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 TEX261Q6UWH6 196 aa5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 Q6ZNX1 250 aa5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 CHCHD10Q8WYQ3 142 aaPredicted RBP5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 RPL39LQ96EH5 51 aaKnown RBP5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 CNFNQ9BYD5 112 aa5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 PLAC8Q9NZF1 115 aa5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
RNU4-59P-201ENST00000364447 IGKV2-24A0A0C4DH68 120 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 SDHAF1A6NFY7 115 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 H7C423 109 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 K7EN84 100 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 PHOX2AO14813 284 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 NDUFS6O75380 124 aaKnown RBP5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 FGF6P10767 208 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 LORP23490 312 aaPredicted RBP5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 MAJINQ3KP22 176 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 SLC51BQ86UW2 128 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 BTF3L4Q96K17 158 aa5.18□□□□□ -1.58
RNU4-59P-201ENST00000364447 PKHD1L1Q86WI1 4243 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 GVQW2A0A096LPI5 108 aaPredicted RBP5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 GATCO43716 136 aaKnown RBP5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 ZNF25P17030 456 aaPredicted RBP5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 PMCHP20382 165 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 STPG4Q8N801 248 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 PRSS3P2Q8NHM4 247 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 OCC1Q8TAD7 63 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 GTSF1Q8WW33 167 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 BORCS7Q96B45 105 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 TMEM101Q96IK0 257 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 PKIGQ9Y2B9 76 aa5.17□□□□□ -1.58
RNU4-59P-201ENST00000364447 FAT3Q8TDW7 4589 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 A8MWL6 223 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 I3L3M4 83 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 XCL1P47992 114 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 CEBPGP53567 150 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 FOXA3P55318 350 aaPredicted RBP5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 FOXI1Q12951 378 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 TCTE3Q8IZS6 198 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 OR5A1Q8NGJ0 315 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 LYPD6BQ8NI32 183 aa5.16□□□□□ -1.58
RNU4-59P-201ENST00000364447 A0A096LNI7 61 aa5.15□□□□□ -1.59
RNU4-59P-201ENST00000364447 TMEM250H0YL14 139 aa5.15□□□□□ -1.59
RNU4-59P-201ENST00000364447 CCL25O15444 150 aa5.15□□□□□ -1.59
RNU4-59P-201ENST00000364447 PRR3P79522 188 aaKnown RBP5.15□□□□□ -1.59
RNU4-59P-201ENST00000364447 MRAP2Q96G30 205 aa5.15□□□□□ -1.59
RNU4-59P-201ENST00000364447 ST20Q9HBF5 79 aa5.15□□□□□ -1.59
RNU4-59P-201ENST00000364447 LINC00474Q9P2X8 69 aa5.15□□□□□ -1.59
RNU4-59P-201ENST00000364447 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
RNU4-59P-201ENST00000364447 IGHV1-58A0A0C4DH39 117 aa5.14□□□□□ -1.59
RNU4-59P-201ENST00000364447 TRBV6-5A0A0K0K1A5 114 aa5.14□□□□□ -1.59
RNU4-59P-201ENST00000364447 LINC00959A0A1B0GUT2 108 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms