RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SIRPDQ9H106 197 aa12□□□□□ -0.49
CLSTN1-201ENST00000361311 IGHV4OR15-8A0A075B7B6 117 aa12□□□□□ -0.49
CLSTN1-201ENST00000361311 A0A087WW49 117 aa12□□□□□ -0.49
CLSTN1-201ENST00000361311 K7EMT4 169 aa12□□□□□ -0.49
CLSTN1-201ENST00000361311 RNASE3P12724 160 aaKnown RBP12□□□□□ -0.49
CLSTN1-201ENST00000361311 CMC4P56277 68 aaPredicted RBP12□□□□□ -0.49
CLSTN1-201ENST00000361311 CDKN2A-AS1Q9UH64 79 aa12□□□□□ -0.49
CLSTN1-201ENST00000361311 A0A0J9YX75 114 aa12□□□□□ -0.49
CLSTN1-201ENST00000361311 C5orf38Q86SI9 138 aa12□□□□□ -0.49
CLSTN1-201ENST00000361311 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
CLSTN1-201ENST00000361311 C14orf132Q9NPU4 83 aa11.99□□□□□ -0.49
CLSTN1-201ENST00000361311 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
CLSTN1-201ENST00000361311 M0QY20 66 aa11.99□□□□□ -0.49
CLSTN1-201ENST00000361311 ANKRD11Q6UB99 2663 aaPredicted RBP11.99□□□□□ -0.49
CLSTN1-201ENST00000361311 DSCR8Q96T75 97 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 IMUPQ9GZP8 106 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 LST1O00453 97 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 NDUFA7O95182 113 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 H7C423 109 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 DSCR9P59020 149 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 EBI3Q14213 229 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 MIR7-3HGQ8N6C7 128 aa11.98□□□□□ -0.49
CLSTN1-201ENST00000361311 ABCA2Q9BZC7 2435 aa11.97□□□□□ -0.49
CLSTN1-201ENST00000361311 IGIPA6NJ69 53 aa11.97□□□□□ -0.49
CLSTN1-201ENST00000361311 IGF2-ASQ6U949 168 aa11.97□□□□□ -0.49
CLSTN1-201ENST00000361311 TMEM61Q8N0U2 210 aa11.97□□□□□ -0.49
CLSTN1-201ENST00000361311 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
CLSTN1-201ENST00000361311 ELANEP08246 267 aa11.97□□□□□ -0.49
CLSTN1-201ENST00000361311 C1orf43Q9BWL3 253 aa11.97□□□□□ -0.49
CLSTN1-201ENST00000361311 hADV29S1A0JD25 119 aa11.96□□□□□ -0.49
CLSTN1-201ENST00000361311 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.49
CLSTN1-201ENST00000361311 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
CLSTN1-201ENST00000361311 HIST2H2BDQ6DRA6 164 aa11.96□□□□□ -0.49
CLSTN1-201ENST00000361311 GATA3P23771 443 aa11.96□□□□□ -0.49
CLSTN1-201ENST00000361311 COX7B2Q8TF08 81 aa11.96□□□□□ -0.49
CLSTN1-201ENST00000361311 HIVEP2P31629 2446 aa11.96□□□□□ -0.49
CLSTN1-201ENST00000361311 C5orf47Q569G3 176 aa11.96□□□□□ -0.5
CLSTN1-201ENST00000361311 A8MZ25 164 aa11.96□□□□□ -0.5
CLSTN1-201ENST00000361311 LINC00308Q8TCZ7 52 aa11.96□□□□□ -0.5
CLSTN1-201ENST00000361311 GPHB5Q86YW7 130 aa11.95□□□□□ -0.5
CLSTN1-201ENST00000361311 IGHG2P01859 326 aa11.95□□□□□ -0.5
CLSTN1-201ENST00000361311 PRB1P04280 392 aa11.95□□□□□ -0.5
CLSTN1-201ENST00000361311 IGHV4-59P01825 116 aa11.95□□□□□ -0.5
CLSTN1-201ENST00000361311 TSPEAR-AS2P59090 65 aa11.95□□□□□ -0.5
CLSTN1-201ENST00000361311 PRO0461Q9UI25 63 aa11.95□□□□□ -0.5
CLSTN1-201ENST00000361311 ADAMTS20P59510 1910 aa11.94□□□□□ -0.5
CLSTN1-201ENST00000361311 XCL1P47992 114 aa11.94□□□□□ -0.5
CLSTN1-201ENST00000361311 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
CLSTN1-201ENST00000361311 PSMG3-AS1Q96PY0 264 aa11.94□□□□□ -0.5
CLSTN1-201ENST00000361311 PSMB8P28062 276 aa11.94□□□□□ -0.5
CLSTN1-201ENST00000361311 IGLV4-69A0A075B6H9 119 aa11.94□□□□□ -0.5
CLSTN1-201ENST00000361311 LINC01356Q8N9X3 169 aa11.94□□□□□ -0.5
CLSTN1-201ENST00000361311 NOP10Q9NPE3 64 aaKnown RBP11.94□□□□□ -0.5
CLSTN1-201ENST00000361311 PTPRBP23467 1997 aa11.93□□□□□ -0.5
CLSTN1-201ENST00000361311 DEFB136Q30KP8 78 aa11.93□□□□□ -0.5
CLSTN1-201ENST00000361311 SMCPP49901 116 aaPredicted RBP11.93□□□□□ -0.5
CLSTN1-201ENST00000361311 CLPSL2Q6UWE3 100 aa11.93□□□□□ -0.5
CLSTN1-201ENST00000361311 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
CLSTN1-201ENST00000361311 LINC00467Q9BRT7 94 aa11.92□□□□□ -0.5
CLSTN1-201ENST00000361311 TNFRSF13BO14836 293 aaPredicted RBP11.92□□□□□ -0.5
CLSTN1-201ENST00000361311 TSHBP01222 138 aa11.92□□□□□ -0.5
CLSTN1-201ENST00000361311 IGHV4-61A0A0C4DH41 118 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 FAM240AA0A1B0GVK7 77 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 CLPSL1A2RUU4 121 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 MAPK1IP1LQ8NDC0 245 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 FASNP49327 2511 aaKnown RBP11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 K7EQD1 137 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 MRGPRG-AS1Q2M3A8 158 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 Q8N6K4 173 aa11.91□□□□□ -0.5
CLSTN1-201ENST00000361311 F8W735 103 aaPredicted RBP11.9□□□□□ -0.5
CLSTN1-201ENST00000361311 DEFB112Q30KQ8 113 aa11.9□□□□□ -0.5
CLSTN1-201ENST00000361311 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
CLSTN1-201ENST00000361311 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
CLSTN1-201ENST00000361311 TRAV23DV6A0A075B6W5 121 aa11.9□□□□□ -0.5
CLSTN1-201ENST00000361311 NDUFA1O15239 70 aa11.9□□□□□ -0.5
CLSTN1-201ENST00000361311 COX7CP15954 63 aa11.9□□□□□ -0.51
CLSTN1-201ENST00000361311 SLURP1P55000 103 aa11.9□□□□□ -0.51
CLSTN1-201ENST00000361311 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
CLSTN1-201ENST00000361311 TMEM258P61165 79 aa11.89□□□□□ -0.51
CLSTN1-201ENST00000361311 ODF3Q96PU9 254 aa11.89□□□□□ -0.51
CLSTN1-201ENST00000361311 PIK3CD-AS1Q5SR53 167 aa11.88□□□□□ -0.51
CLSTN1-201ENST00000361311 C20orf197Q8N268 126 aa11.88□□□□□ -0.51
CLSTN1-201ENST00000361311 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
CLSTN1-201ENST00000361311 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
CLSTN1-201ENST00000361311 M0QXV9 152 aa11.88□□□□□ -0.51
CLSTN1-201ENST00000361311 TIMM17BO60830 172 aa11.88□□□□□ -0.51
CLSTN1-201ENST00000361311 CRYGDP07320 174 aa11.87□□□□□ -0.51
CLSTN1-201ENST00000361311 Q8NA96 180 aa11.87□□□□□ -0.51
CLSTN1-201ENST00000361311 PROK1P58294 105 aa11.87□□□□□ -0.51
CLSTN1-201ENST00000361311 KLLNB2CW77 178 aa11.87□□□□□ -0.51
CLSTN1-201ENST00000361311 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
CLSTN1-201ENST00000361311 A0A096LPF7 62 aa11.86□□□□□ -0.51
CLSTN1-201ENST00000361311 TIRAPP58753 221 aa11.86□□□□□ -0.51
CLSTN1-201ENST00000361311 PRRC2AP48634 2157 aaKnown RBP11.86□□□□□ -0.51
CLSTN1-201ENST00000361311 LINC01546A6NGU7 62 aa11.85□□□□□ -0.51
CLSTN1-201ENST00000361311 K7EQG2 157 aa11.85□□□□□ -0.51
CLSTN1-201ENST00000361311 ZFYVE26Q68DK2 2539 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms