RNA–Protein interactions for RNA: ENST00000358923.10

PDE4D-204, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-204ENST00000358923 PLNP26678 52 aa13.27□□□□□ -0.28
PDE4D-204ENST00000358923 MUC4Q99102 2169 aa13.27□□□□□ -0.28
PDE4D-204ENST00000358923 STAB1Q9NY15 2570 aa13.27□□□□□ -0.29
PDE4D-204ENST00000358923 UBE2D1P51668 147 aa13.27□□□□□ -0.29
PDE4D-204ENST00000358923 SPINK13Q1W4C9 94 aa13.27□□□□□ -0.29
PDE4D-204ENST00000358923 APRG1Q8IVJ8 170 aa13.27□□□□□ -0.29
PDE4D-204ENST00000358923 TMEM89A2RUT3 159 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 NSUN5P1Q3KNT7 163 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 COX8CQ7Z4L0 72 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 MDFICQ9P1T7 246 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 M0R381 172 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 SLC25A20O43772 301 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 LINC01546A6NGU7 62 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 SCGB1D4Q6XE38 83 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 C15orf53Q8NAA6 179 aa13.26□□□□□ -0.29
PDE4D-204ENST00000358923 TNFRSF6BO95407 300 aa13.25□□□□□ -0.29
PDE4D-204ENST00000358923 C4orf3Q8WVX3 66 aa13.25□□□□□ -0.29
PDE4D-204ENST00000358923 MRPL53Q96EL3 112 aaKnown RBP13.25□□□□□ -0.29
PDE4D-204ENST00000358923 K7EQG2 157 aa13.24□□□□□ -0.29
PDE4D-204ENST00000358923 OVOL1O14753 267 aa13.24□□□□□ -0.29
PDE4D-204ENST00000358923 DEFB131AP59861 70 aa13.24□□□□□ -0.29
PDE4D-204ENST00000358923 C9JAW5 83 aa13.23□□□□□ -0.29
PDE4D-204ENST00000358923 LINC00477Q96M19 166 aa13.23□□□□□ -0.29
PDE4D-204ENST00000358923 NACAE9PAV3 2078 aa13.23□□□□□ -0.29
PDE4D-204ENST00000358923 JPT2Q9H910 190 aa13.23□□□□□ -0.29
PDE4D-204ENST00000358923 TRAV8-4A0A0B4J246 113 aa13.22□□□□□ -0.29
PDE4D-204ENST00000358923 TMEM86BQ8N661 226 aa13.22□□□□□ -0.29
PDE4D-204ENST00000358923 DNAJC30Q96LL9 226 aa13.22□□□□□ -0.29
PDE4D-204ENST00000358923 FBN1P35555 2871 aaKnown RBP13.22□□□□□ -0.29
PDE4D-204ENST00000358923 MAST4O15021 2626 aa13.22□□□□□ -0.29
PDE4D-204ENST00000358923 CCL24O00175 119 aa13.22□□□□□ -0.29
PDE4D-204ENST00000358923 NDUFA11Q86Y39 141 aa13.22□□□□□ -0.29
PDE4D-204ENST00000358923 PKD1L1Q8TDX9 2849 aa13.21□□□□□ -0.29
PDE4D-204ENST00000358923 RNASE1P07998 156 aaKnown RBP13.21□□□□□ -0.29
PDE4D-204ENST00000358923 KRTAP10-3P60369 221 aa13.21□□□□□ -0.29
PDE4D-204ENST00000358923 SNRPD3P62318 126 aaKnown RBP13.21□□□□□ -0.29
PDE4D-204ENST00000358923 RNF185Q96GF1 192 aa13.21□□□□□ -0.29
PDE4D-204ENST00000358923 ZNF815PA8K554 130 aa13.21□□□□□ -0.29
PDE4D-204ENST00000358923 LGALS9O00182 355 aa13.21□□□□□ -0.29
PDE4D-204ENST00000358923 S100A4P26447 101 aaKnown RBP13.21□□□□□ -0.29
PDE4D-204ENST00000358923 SPANXN1Q5VSR9 72 aa13.21□□□□□ -0.29
PDE4D-204ENST00000358923 LINC01587Q99440 93 aa13.21□□□□□ -0.29
PDE4D-204ENST00000358923 CHCHD5Q9BSY4 110 aa13.21□□□□□ -0.29
PDE4D-204ENST00000358923 LINC00694P0DN24 101 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 HILS1P60008 231 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 Q8N8P6 123 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 DYNLRB2Q8TF09 96 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
PDE4D-204ENST00000358923 ODF3Q96PU9 254 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 A0A0J9YX75 114 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 CD7P09564 240 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 Q8N1Y9 231 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 H7C1H1 209 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 SPATA3Q8NHX4 192 aa13.2□□□□□ -0.3
PDE4D-204ENST00000358923 SMIM9A6NGZ8 99 aa13.19□□□□□ -0.3
PDE4D-204ENST00000358923 F8VRH5 84 aa13.19□□□□□ -0.3
PDE4D-204ENST00000358923 FAM19A4Q96LR4 140 aa13.19□□□□□ -0.3
PDE4D-204ENST00000358923 TRAV2A0A0B4J234 112 aa13.19□□□□□ -0.3
PDE4D-204ENST00000358923 WFDC10AQ9H1F0 79 aa13.19□□□□□ -0.3
PDE4D-204ENST00000358923 TRAV21A0A0B4J279 112 aa13.18□□□□□ -0.3
PDE4D-204ENST00000358923 C14orf178Q8N769 122 aaPredicted RBP13.18□□□□□ -0.3
PDE4D-204ENST00000358923 PLEKHB2Q96CS7 222 aa13.18□□□□□ -0.3
PDE4D-204ENST00000358923 RBMY1A1P0DJD3 496 aaKnown RBP13.17□□□□□ -0.3
PDE4D-204ENST00000358923 RBMY1CP0DJD4 496 aa13.17□□□□□ -0.3
PDE4D-204ENST00000358923 LAGE3Q14657 143 aa13.17□□□□□ -0.3
PDE4D-204ENST00000358923 RBMY1FQ15415 496 aaKnown RBP13.17□□□□□ -0.3
PDE4D-204ENST00000358923 PRADC1Q9BSG0 188 aa13.17□□□□□ -0.3
PDE4D-204ENST00000358923 LOC107984640A0A0U1RRK4 108 aa13.17□□□□□ -0.3
PDE4D-204ENST00000358923 DEFB114Q30KQ6 69 aa13.17□□□□□ -0.3
PDE4D-204ENST00000358923 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
PDE4D-204ENST00000358923 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
PDE4D-204ENST00000358923 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
PDE4D-204ENST00000358923 RNASE3P12724 160 aaKnown RBP13.17□□□□□ -0.3
PDE4D-204ENST00000358923 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
PDE4D-204ENST00000358923 TRPT1Q86TN4 253 aaKnown RBP13.16□□□□□ -0.3
PDE4D-204ENST00000358923 C10orf126Q8N4M7 172 aa13.16□□□□□ -0.3
PDE4D-204ENST00000358923 KLLNB2CW77 178 aa13.15□□□□□ -0.3
PDE4D-204ENST00000358923 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
PDE4D-204ENST00000358923 PHLDA3Q9Y5J5 127 aa13.15□□□□□ -0.3
PDE4D-204ENST00000358923 PEMTQ9UBM1 199 aa13.14□□□□□ -0.31
PDE4D-204ENST00000358923 COL6A5A8TX70 2615 aa13.14□□□□□ -0.31
PDE4D-204ENST00000358923 A0A087WWL8 130 aa13.14□□□□□ -0.31
PDE4D-204ENST00000358923 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
PDE4D-204ENST00000358923 TEX49A0A1B0GTD5 131 aa13.14□□□□□ -0.31
PDE4D-204ENST00000358923 CYSRT1A8MQ03 144 aa13.14□□□□□ -0.31
PDE4D-204ENST00000358923 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
PDE4D-204ENST00000358923 CFC1P0CG37 223 aa13.14□□□□□ -0.31
PDE4D-204ENST00000358923 TRAV12-1A0A0B4J245 112 aa13.13□□□□□ -0.31
PDE4D-204ENST00000358923 ADARB2-AS1A8MUL3 147 aa13.13□□□□□ -0.31
PDE4D-204ENST00000358923 PRO1854Q9UHT4 67 aa13.13□□□□□ -0.31
PDE4D-204ENST00000358923 MRPL23Q16540 153 aaKnown RBP13.13□□□□□ -0.31
PDE4D-204ENST00000358923 MGPP08493 103 aa13.12□□□□□ -0.31
PDE4D-204ENST00000358923 PROK1P58294 105 aa13.12□□□□□ -0.31
PDE4D-204ENST00000358923 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
PDE4D-204ENST00000358923 C9orf153Q5TBE3 101 aa13.12□□□□□ -0.31
PDE4D-204ENST00000358923 CNFNQ9BYD5 112 aa13.12□□□□□ -0.31
PDE4D-204ENST00000358923 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
PDE4D-204ENST00000358923 IGHV3OR16-12A0A075B7B8 117 aa13.11□□□□□ -0.31
PDE4D-204ENST00000358923 EMP1P54849 157 aa13.11□□□□□ -0.31
PDE4D-204ENST00000358923 RPL39LQ96EH5 51 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms