RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TMEM61Q8N0U2 210 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 RBMY1BA6NDE4 496 aaKnown RBP15□□□□□ -0.01
COL13A1-202ENST00000357811 RBMY1EA6NEQ0 496 aaKnown RBP15□□□□□ -0.01
COL13A1-202ENST00000357811 A8MZ25 164 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 RBMY1DP0C7P1 496 aaKnown RBP15□□□□□ -0.01
COL13A1-202ENST00000357811 SCGB1C2P0DMR2 95 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 SMCPP49901 116 aaPredicted RBP15□□□□□ -0.01
COL13A1-202ENST00000357811 AMELXQ99217 191 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 TRAV8-3A0A0A6YYJ7 113 aa14.99□□□□□ -0.01
COL13A1-202ENST00000357811 IGLV4-3A0A075B6K6 122 aa14.99□□□□□ -0.01
COL13A1-202ENST00000357811 IGHV3OR16-12A0A075B7B8 117 aa14.99□□□□□ -0.01
COL13A1-202ENST00000357811 DLX4Q92988 240 aaPredicted RBP14.99□□□□□ -0.01
COL13A1-202ENST00000357811 A0A096LNT2 108 aa14.98□□□□□ -0.01
COL13A1-202ENST00000357811 CD28P10747 220 aa14.98□□□□□ -0.01
COL13A1-202ENST00000357811 ZNF22P17026 224 aaPredicted RBP14.98□□□□□ -0.01
COL13A1-202ENST00000357811 SLC25A29Q8N8R3 303 aa14.98□□□□□ -0.01
COL13A1-202ENST00000357811 NPC2P61916 151 aa14.98□□□□□ -0.01
COL13A1-202ENST00000357811 CDIP1Q9H305 208 aa14.98□□□□□ -0.01
COL13A1-202ENST00000357811 A4D1N5 150 aa14.97□□□□□ -0.01
COL13A1-202ENST00000357811 UBE2E2Q96LR5 201 aa14.97□□□□□ -0.01
COL13A1-202ENST00000357811 ODF3Q96PU9 254 aa14.97□□□□□ -0.01
COL13A1-202ENST00000357811 XGP55808 180 aa14.97□□□□□ -0.01
COL13A1-202ENST00000357811 NSUN5P1Q3KNT7 163 aa14.97□□□□□ -0.01
COL13A1-202ENST00000357811 NFE4Q86UQ8 179 aa14.97□□□□□ -0.01
COL13A1-202ENST00000357811 TRGV11A0A075B6L2 103 aa14.96□□□□□ -0.01
COL13A1-202ENST00000357811 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.96□□□□□ -0.01
COL13A1-202ENST00000357811 IGKV2-29A2NJV5 120 aaPredicted RBP14.96□□□□□ -0.01
COL13A1-202ENST00000357811 TCL1BO95988 128 aa14.96□□□□□ -0.01
COL13A1-202ENST00000357811 TMEM223A0PJW6 202 aa14.96□□□□□ -0.02
COL13A1-202ENST00000357811 RHODO00212 210 aa14.96□□□□□ -0.02
COL13A1-202ENST00000357811 ELANEP08246 267 aa14.96□□□□□ -0.02
COL13A1-202ENST00000357811 Q6YL49 198 aa14.96□□□□□ -0.02
COL13A1-202ENST00000357811 DSCR9P59020 149 aa14.95□□□□□ -0.02
COL13A1-202ENST00000357811 TNFRSF18Q9Y5U5 241 aa14.95□□□□□ -0.02
COL13A1-202ENST00000357811 A0A1W2PRX2 142 aa14.95□□□□□ -0.02
COL13A1-202ENST00000357811 C1QTNF4Q9BXJ3 329 aa14.95□□□□□ -0.02
COL13A1-202ENST00000357811 PRSS2P07478 247 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 FHL3Q13643 280 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 RHOHQ15669 191 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 LINC01587Q99440 93 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 SETXQ7Z333 2677 aaKnown RBP14.94□□□□□ -0.02
COL13A1-202ENST00000357811 H3BMM0 161 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 IGHV4-31P0DP07 118 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 CFAP126Q5VTH2 177 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 Q6ZUT4 128 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 MUSTN1Q8IVN3 82 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 UBR5O95071 2799 aaPredicted RBP14.94□□□□□ -0.02
COL13A1-202ENST00000357811 C10orf126Q8N4M7 172 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 ANAPC13Q9BS18 74 aa14.94□□□□□ -0.02
COL13A1-202ENST00000357811 EIF4EBP3O60516 100 aaPredicted RBP14.93□□□□□ -0.02
COL13A1-202ENST00000357811 BBC3Q96PG8 261 aaPredicted RBP14.92□□□□□ -0.02
COL13A1-202ENST00000357811 XCL2Q9UBD3 114 aa14.92□□□□□ -0.02
COL13A1-202ENST00000357811 DYNLRB2Q8TF09 96 aa14.92□□□□□ -0.02
COL13A1-202ENST00000357811 PRO1854Q9UHT4 67 aa14.92□□□□□ -0.02
COL13A1-202ENST00000357811 FN1P02751 2386 aaKnown RBP14.92□□□□□ -0.02
COL13A1-202ENST00000357811 CR1P17927 2039 aa14.91□□□□□ -0.02
COL13A1-202ENST00000357811 LEPROTO15243 131 aa14.91□□□□□ -0.02
COL13A1-202ENST00000357811 Q1RN00 199 aa14.91□□□□□ -0.02
COL13A1-202ENST00000357811 B5MCH6 92 aa14.91□□□□□ -0.02
COL13A1-202ENST00000357811 UBE2D3P61077 147 aa14.91□□□□□ -0.02
COL13A1-202ENST00000357811 UBE2D2P62837 147 aa14.91□□□□□ -0.02
COL13A1-202ENST00000357811 FAM104AQ969W3 186 aa14.91□□□□□ -0.02
COL13A1-202ENST00000357811 IGHV3-30-3P0DP02 117 aa14.9□□□□□ -0.02
COL13A1-202ENST00000357811 TMEM89A2RUT3 159 aa14.89□□□□□ -0.03
COL13A1-202ENST00000357811 ERG28Q9UKR5 140 aa14.89□□□□□ -0.03
COL13A1-202ENST00000357811 J3QLI3 93 aa14.88□□□□□ -0.03
COL13A1-202ENST00000357811 TIMM21Q9BVV7 248 aa14.88□□□□□ -0.03
COL13A1-202ENST00000357811 Q6ZSV7 163 aa14.88□□□□□ -0.03
COL13A1-202ENST00000357811 M0R2P5 195 aa14.88□□□□□ -0.03
COL13A1-202ENST00000357811 Q96MF0 132 aa14.88□□□□□ -0.03
COL13A1-202ENST00000357811 MAP6D1Q9H9H5 199 aa14.88□□□□□ -0.03
COL13A1-202ENST00000357811 IGHV3-53P01767 116 aa14.87□□□□□ -0.03
COL13A1-202ENST00000357811 DAND5Q8N907 189 aa14.87□□□□□ -0.03
COL13A1-202ENST00000357811 A0A0J9YXY3 114 aa14.87□□□□□ -0.03
COL13A1-202ENST00000357811 LINC00467Q9BRT7 94 aa14.87□□□□□ -0.03
COL13A1-202ENST00000357811 A0A0U1RRA0 63 aa14.85□□□□□ -0.03
COL13A1-202ENST00000357811 ADAMTSL4-AS1Q5T5F5 129 aa14.85□□□□□ -0.03
COL13A1-202ENST00000357811 C9JAW5 83 aa14.84□□□□□ -0.03
COL13A1-202ENST00000357811 CARD19Q96LW7 228 aa14.84□□□□□ -0.03
COL13A1-202ENST00000357811 ZNF415Q09FC8 603 aa14.84□□□□□ -0.03
COL13A1-202ENST00000357811 CHCHD7Q9BUK0 85 aa14.83□□□□□ -0.03
COL13A1-202ENST00000357811 A8MWV9 139 aa14.83□□□□□ -0.04
COL13A1-202ENST00000357811 IGHV3-33P01772 117 aa14.83□□□□□ -0.04
COL13A1-202ENST00000357811 GAGE5Q13069 117 aa14.83□□□□□ -0.04
COL13A1-202ENST00000357811 GAGE6Q13070 117 aa14.83□□□□□ -0.04
COL13A1-202ENST00000357811 TEX29Q8N6K0 151 aa14.83□□□□□ -0.04
COL13A1-202ENST00000357811 ZFAND6Q6FIF0 208 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 NDUFA12Q9UI09 145 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 NBEAL2Q6ZNJ1 2754 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 ITPR2Q14571 2701 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 NDUFA7O95182 113 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 FSHBP01225 129 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 TMEM263Q8WUH6 116 aaKnown RBP14.82□□□□□ -0.04
COL13A1-202ENST00000357811 PPDPFLQ8WWR9 84 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 ZNF625Q96I27 306 aaPredicted RBP14.82□□□□□ -0.04
COL13A1-202ENST00000357811 NOTCH2Q04721 2471 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 ANKRD29Q8N6D5 301 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 PEMTQ9UBM1 199 aa14.82□□□□□ -0.04
COL13A1-202ENST00000357811 DEFB114Q30KQ6 69 aa14.81□□□□□ -0.04
COL13A1-202ENST00000357811 HIST2H2BCQ6DN03 193 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms