RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 SEC11AP67812 179 aa12.8□□□□□ -0.36
NPAS3-202ENST00000356141 OR5A1Q8NGJ0 315 aa12.8□□□□□ -0.36
NPAS3-202ENST00000356141 TP53TG1Q9Y2A0 90 aa12.8□□□□□ -0.36
NPAS3-202ENST00000356141 WIPF1O43516 503 aa12.8□□□□□ -0.36
NPAS3-202ENST00000356141 NXPH4O95158 308 aa12.8□□□□□ -0.36
NPAS3-202ENST00000356141 IGLV1-51P01701 117 aa12.8□□□□□ -0.36
NPAS3-202ENST00000356141 RNASE13Q5GAN3 156 aaKnown RBP12.8□□□□□ -0.36
NPAS3-202ENST00000356141 A6NDN8 102 aa12.79□□□□□ -0.36
NPAS3-202ENST00000356141 H3BRM9 83 aa12.79□□□□□ -0.36
NPAS3-202ENST00000356141 J3QR89 54 aa12.79□□□□□ -0.36
NPAS3-202ENST00000356141 M0QY20 66 aa12.79□□□□□ -0.36
NPAS3-202ENST00000356141 PPDPFQ9H3Y8 114 aa12.79□□□□□ -0.36
NPAS3-202ENST00000356141 IGKV2D-26A0A0A0MRZ7 120 aa12.78□□□□□ -0.36
NPAS3-202ENST00000356141 NDUFA7O95182 113 aa12.78□□□□□ -0.36
NPAS3-202ENST00000356141 GAGE5Q13069 117 aa12.78□□□□□ -0.36
NPAS3-202ENST00000356141 GAGE6Q13070 117 aa12.78□□□□□ -0.36
NPAS3-202ENST00000356141 CEMP1Q6PRD7 247 aaPredicted RBP12.78□□□□□ -0.36
NPAS3-202ENST00000356141 TRPT1Q86TN4 253 aaKnown RBP12.78□□□□□ -0.36
NPAS3-202ENST00000356141 A0A1W2PPM0 123 aa12.78□□□□□ -0.36
NPAS3-202ENST00000356141 FABP2P12104 132 aa12.78□□□□□ -0.36
NPAS3-202ENST00000356141 Q6ZTI0 123 aa12.78□□□□□ -0.36
NPAS3-202ENST00000356141 NOP10Q9NPE3 64 aaKnown RBP12.78□□□□□ -0.36
NPAS3-202ENST00000356141 NOTCH1P46531 2555 aa12.78□□□□□ -0.36
NPAS3-202ENST00000356141 CRLF1O75462 422 aa12.77□□□□□ -0.37
NPAS3-202ENST00000356141 ZNF415Q09FC8 603 aa12.77□□□□□ -0.37
NPAS3-202ENST00000356141 GIG44P09565 113 aaPredicted RBP12.76□□□□□ -0.37
NPAS3-202ENST00000356141 SEC61GP60059 68 aa12.76□□□□□ -0.37
NPAS3-202ENST00000356141 C2orf91Q6ZV80 131 aa12.76□□□□□ -0.37
NPAS3-202ENST00000356141 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
NPAS3-202ENST00000356141 SPATA25Q9BR10 227 aa12.76□□□□□ -0.37
NPAS3-202ENST00000356141 K7EMI3 77 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 DEFB4AO15263 64 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 ZFP2Q6ZN57 461 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 SH2D6Q7Z4S9 175 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 M0R2P5 195 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 LGALS9BQ3B8N2 356 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 LGALS9CQ6DKI2 356 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 KIR2DL4Q99706 377 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 C20orf78Q9BR46 151 aa12.75□□□□□ -0.37
NPAS3-202ENST00000356141 WFDC2Q14508 124 aa12.74□□□□□ -0.37
NPAS3-202ENST00000356141 CFAP126Q5VTH2 177 aa12.74□□□□□ -0.37
NPAS3-202ENST00000356141 NDUFA11Q86Y39 141 aa12.74□□□□□ -0.37
NPAS3-202ENST00000356141 C19orf73Q9NVV2 129 aa12.74□□□□□ -0.37
NPAS3-202ENST00000356141 ERG28Q9UKR5 140 aa12.74□□□□□ -0.37
NPAS3-202ENST00000356141 TRAV2A0A0B4J234 112 aa12.74□□□□□ -0.37
NPAS3-202ENST00000356141 ORMDL2Q53FV1 153 aa12.74□□□□□ -0.37
NPAS3-202ENST00000356141 POM121L12Q8N7R1 296 aa12.74□□□□□ -0.37
NPAS3-202ENST00000356141 PRSS29PA6NIE9 313 aa12.73□□□□□ -0.37
NPAS3-202ENST00000356141 GAGE7O76087 117 aa12.73□□□□□ -0.37
NPAS3-202ENST00000356141 IGKCP01834 107 aa12.73□□□□□ -0.37
NPAS3-202ENST00000356141 GAGE12FP0CL80 117 aa12.73□□□□□ -0.37
NPAS3-202ENST00000356141 GAGE12GP0CL81 117 aa12.73□□□□□ -0.37
NPAS3-202ENST00000356141 GAGE12IP0CL82 117 aa12.73□□□□□ -0.37
NPAS3-202ENST00000356141 POLR2KP53803 58 aaKnown RBP12.73□□□□□ -0.37
NPAS3-202ENST00000356141 ETDBQ3ZM63 59 aa12.73□□□□□ -0.37
NPAS3-202ENST00000356141 SPINK8P0C7L1 97 aa12.73□□□□□ -0.37
NPAS3-202ENST00000356141 SAMD5Q5TGI4 173 aa12.72□□□□□ -0.37
NPAS3-202ENST00000356141 INSL3P51460 131 aa12.72□□□□□ -0.37
NPAS3-202ENST00000356141 BAALCQ8WXS3 180 aa12.72□□□□□ -0.37
NPAS3-202ENST00000356141 ANAPC13Q9BS18 74 aa12.72□□□□□ -0.37
NPAS3-202ENST00000356141 VCYO14598 125 aa12.71□□□□□ -0.37
NPAS3-202ENST00000356141 TOMM6Q96B49 74 aa12.71□□□□□ -0.37
NPAS3-202ENST00000356141 A8MTW9 85 aa12.71□□□□□ -0.37
NPAS3-202ENST00000356141 ATP5LO75964 103 aa12.71□□□□□ -0.37
NPAS3-202ENST00000356141 TSHBP01222 138 aa12.71□□□□□ -0.37
NPAS3-202ENST00000356141 IGHV3-64A0A075B6Q5 118 aa12.7□□□□□ -0.38
NPAS3-202ENST00000356141 LINC01546A6NGU7 62 aa12.7□□□□□ -0.38
NPAS3-202ENST00000356141 SPANXB1Q9NS25 103 aaPredicted RBP12.7□□□□□ -0.38
NPAS3-202ENST00000356141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.7□□□□□ -0.38
NPAS3-202ENST00000356141 IGKV2-29A2NJV5 120 aaPredicted RBP12.7□□□□□ -0.38
NPAS3-202ENST00000356141 CYSLTR1Q9Y271 337 aa12.7□□□□□ -0.38
NPAS3-202ENST00000356141 CSDC2Q9Y534 153 aaKnown RBP12.7□□□□□ -0.38
NPAS3-202ENST00000356141 ANK2Q01484 3957 aa12.7□□□□□ -0.38
NPAS3-202ENST00000356141 DPM2O94777 84 aa12.7□□□□□ -0.38
NPAS3-202ENST00000356141 COX8AP10176 69 aa12.7□□□□□ -0.38
NPAS3-202ENST00000356141 HHLA3Q9XRX5 114 aa12.7□□□□□ -0.38
NPAS3-202ENST00000356141 PTH2Q96A98 100 aa12.69□□□□□ -0.38
NPAS3-202ENST00000356141 DEFB130BP0DP73 79 aa12.69□□□□□ -0.38
NPAS3-202ENST00000356141 DEFB130AP0DP74 79 aa12.69□□□□□ -0.38
NPAS3-202ENST00000356141 BEAN1Q3B7T3 259 aa12.69□□□□□ -0.38
NPAS3-202ENST00000356141 LOC100131303A0A0U1RQF7 123 aa12.68□□□□□ -0.38
NPAS3-202ENST00000356141 TRGV2A0A075B6R0 118 aa12.68□□□□□ -0.38
NPAS3-202ENST00000356141 A0A087WX48 190 aa12.67□□□□□ -0.38
NPAS3-202ENST00000356141 C1QTNF4Q9BXJ3 329 aa12.67□□□□□ -0.38
NPAS3-202ENST00000356141 ZNRF2Q8NHG8 242 aa12.67□□□□□ -0.38
NPAS3-202ENST00000356141 MT-ATP8P03928 68 aa12.66□□□□□ -0.38
NPAS3-202ENST00000356141 NEXN-AS1Q8NBZ9 246 aa12.66□□□□□ -0.38
NPAS3-202ENST00000356141 TRBV27A0A0K0K1C4 114 aa12.66□□□□□ -0.38
NPAS3-202ENST00000356141 GAGE12JA6NER3 117 aa12.66□□□□□ -0.38
NPAS3-202ENST00000356141 A8MWV9 139 aa12.66□□□□□ -0.38
NPAS3-202ENST00000356141 GAGE4Q13068 117 aa12.66□□□□□ -0.38
NPAS3-202ENST00000356141 GAGE13Q4V321 117 aa12.66□□□□□ -0.38
NPAS3-202ENST00000356141 MAPKAPK5-AS1Q8N8E1 139 aa12.66□□□□□ -0.38
NPAS3-202ENST00000356141 FGF6P10767 208 aa12.65□□□□□ -0.38
NPAS3-202ENST00000356141 I3L3M4 83 aa12.65□□□□□ -0.38
NPAS3-202ENST00000356141 PPP1R17O96001 155 aa12.65□□□□□ -0.38
NPAS3-202ENST00000356141 DEFB135Q30KP9 77 aa12.65□□□□□ -0.38
NPAS3-202ENST00000356141 RRN3P1Q2M238 152 aa12.64□□□□□ -0.39
NPAS3-202ENST00000356141 OXLD1Q5BKU9 147 aa12.64□□□□□ -0.39
NPAS3-202ENST00000356141 H7C1H1 209 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms