RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 AVPP01185 164 aa11.62□□□□□ -0.55
RTN3-205ENST00000356000 FAM27E3Q08E93 113 aa11.62□□□□□ -0.55
RTN3-205ENST00000356000 TRAV21A0A0B4J279 112 aa11.61□□□□□ -0.55
RTN3-205ENST00000356000 TRBV6-5A0A0K0K1A5 114 aa11.61□□□□□ -0.55
RTN3-205ENST00000356000 C1orf195Q5TG92 126 aa11.61□□□□□ -0.55
RTN3-205ENST00000356000 LYPD2Q6UXB3 125 aa11.61□□□□□ -0.55
RTN3-205ENST00000356000 UBE2D4Q9Y2X8 147 aa11.61□□□□□ -0.55
RTN3-205ENST00000356000 UBR5O95071 2799 aaPredicted RBP11.6□□□□□ -0.55
RTN3-205ENST00000356000 IGF1P05019 195 aa11.6□□□□□ -0.55
RTN3-205ENST00000356000 C9orf106Q8NAJ2 232 aa11.6□□□□□ -0.55
RTN3-205ENST00000356000 ICE1Q9Y2F5 2266 aa11.6□□□□□ -0.55
RTN3-205ENST00000356000 IGLV4-3A0A075B6K6 122 aa11.6□□□□□ -0.55
RTN3-205ENST00000356000 DNAL4O96015 105 aa11.6□□□□□ -0.55
RTN3-205ENST00000356000 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
RTN3-205ENST00000356000 VMO1Q7Z5L0 202 aa11.6□□□□□ -0.55
RTN3-205ENST00000356000 Q8N2B8 174 aa11.6□□□□□ -0.55
RTN3-205ENST00000356000 CELSR3Q9NYQ7 3312 aa11.6□□□□□ -0.55
RTN3-205ENST00000356000 ZFAND2AQ8N6M9 145 aa11.59□□□□□ -0.55
RTN3-205ENST00000356000 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
RTN3-205ENST00000356000 GNLYP22749 145 aa11.59□□□□□ -0.55
RTN3-205ENST00000356000 LINC00846Q9NV44 126 aa11.59□□□□□ -0.55
RTN3-205ENST00000356000 RNASE4P34096 147 aaKnown RBP11.58□□□□□ -0.55
RTN3-205ENST00000356000 IGFL2Q6UWQ7 119 aa11.58□□□□□ -0.55
RTN3-205ENST00000356000 C16orf92Q96LL3 132 aa11.58□□□□□ -0.55
RTN3-205ENST00000356000 SMIM26A0A096LP01 95 aa11.58□□□□□ -0.56
RTN3-205ENST00000356000 IGHV3-35A0A0C4DH35 117 aa11.58□□□□□ -0.56
RTN3-205ENST00000356000 MRPS36P82909 103 aaKnown RBP11.58□□□□□ -0.56
RTN3-205ENST00000356000 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
RTN3-205ENST00000356000 CLPSL1A2RUU4 121 aa11.57□□□□□ -0.56
RTN3-205ENST00000356000 IGHG2P01859 326 aa11.57□□□□□ -0.56
RTN3-205ENST00000356000 C20orf203Q8NBC4 194 aa11.57□□□□□ -0.56
RTN3-205ENST00000356000 WFDC11Q8NEX6 87 aa11.57□□□□□ -0.56
RTN3-205ENST00000356000 VSIG2Q96IQ7 327 aa11.57□□□□□ -0.56
RTN3-205ENST00000356000 NBR2O15453 112 aa11.57□□□□□ -0.56
RTN3-205ENST00000356000 GNRH2O43555 120 aa11.57□□□□□ -0.56
RTN3-205ENST00000356000 FAM218AQ96MZ4 157 aa11.57□□□□□ -0.56
RTN3-205ENST00000356000 ATP1A1-AS1Q5TC04 95 aa11.56□□□□□ -0.56
RTN3-205ENST00000356000 IGHV3-66A0A0C4DH42 116 aa11.56□□□□□ -0.56
RTN3-205ENST00000356000 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
RTN3-205ENST00000356000 MUC4Q99102 2169 aa11.56□□□□□ -0.56
RTN3-205ENST00000356000 GHRHP01286 108 aa11.56□□□□□ -0.56
RTN3-205ENST00000356000 RBMY1BA6NDE4 496 aaKnown RBP11.55□□□□□ -0.56
RTN3-205ENST00000356000 RBMY1EA6NEQ0 496 aaKnown RBP11.55□□□□□ -0.56
RTN3-205ENST00000356000 TMEM178BH3BS89 294 aa11.55□□□□□ -0.56
RTN3-205ENST00000356000 RBMY1DP0C7P1 496 aaKnown RBP11.55□□□□□ -0.56
RTN3-205ENST00000356000 RBMY1A1P0DJD3 496 aaKnown RBP11.55□□□□□ -0.56
RTN3-205ENST00000356000 RBMY1CP0DJD4 496 aa11.55□□□□□ -0.56
RTN3-205ENST00000356000 XCL1P47992 114 aa11.55□□□□□ -0.56
RTN3-205ENST00000356000 RBMY1FQ15415 496 aaKnown RBP11.55□□□□□ -0.56
RTN3-205ENST00000356000 XCL2Q9UBD3 114 aa11.55□□□□□ -0.56
RTN3-205ENST00000356000 Q8NA96 180 aa11.55□□□□□ -0.56
RTN3-205ENST00000356000 F5H697 171 aa11.54□□□□□ -0.56
RTN3-205ENST00000356000 H7BZZ5 65 aa11.54□□□□□ -0.56
RTN3-205ENST00000356000 C20orf197Q8N268 126 aa11.54□□□□□ -0.56
RTN3-205ENST00000356000 FDCSPQ8NFU4 85 aa11.54□□□□□ -0.56
RTN3-205ENST00000356000 CFAP46Q8IYW2 2715 aa11.54□□□□□ -0.56
RTN3-205ENST00000356000 A8MZ25 164 aa11.54□□□□□ -0.56
RTN3-205ENST00000356000 NPBQ8NG41 125 aa11.54□□□□□ -0.56
RTN3-205ENST00000356000 LINC00308Q8TCZ7 52 aa11.54□□□□□ -0.56
RTN3-205ENST00000356000 NUP37Q8NFH4 326 aa11.53□□□□□ -0.56
RTN3-205ENST00000356000 TENM4Q6N022 2769 aa11.53□□□□□ -0.56
RTN3-205ENST00000356000 OBSCN-AS1Q96MR7 158 aa11.53□□□□□ -0.56
RTN3-205ENST00000356000 A0A087WWL8 130 aa11.52□□□□□ -0.57
RTN3-205ENST00000356000 KNCNA6PVL3 124 aa11.52□□□□□ -0.57
RTN3-205ENST00000356000 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
RTN3-205ENST00000356000 C14orf132Q9NPU4 83 aa11.52□□□□□ -0.57
RTN3-205ENST00000356000 IGHV3OR16-13A0A075B7E8 117 aa11.52□□□□□ -0.57
RTN3-205ENST00000356000 IGHV3-74A0A0B4J1X5 117 aa11.52□□□□□ -0.57
RTN3-205ENST00000356000 KAAG1Q9UBP8 84 aa11.52□□□□□ -0.57
RTN3-205ENST00000356000 CDSNQ15517 529 aa11.51□□□□□ -0.57
RTN3-205ENST00000356000 ITLN2Q8WWU7 325 aaPredicted RBP11.51□□□□□ -0.57
RTN3-205ENST00000356000 RNASE6Q93091 150 aaKnown RBP11.51□□□□□ -0.57
RTN3-205ENST00000356000 FAM104AQ969W3 186 aa11.51□□□□□ -0.57
RTN3-205ENST00000356000 Q9HAA7 133 aa11.51□□□□□ -0.57
RTN3-205ENST00000356000 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
RTN3-205ENST00000356000 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
RTN3-205ENST00000356000 LY6G5BQ8NDX9 201 aa11.51□□□□□ -0.57
RTN3-205ENST00000356000 A0A0U1RQV1 116 aa11.5□□□□□ -0.57
RTN3-205ENST00000356000 NDPQ00604 133 aa11.5□□□□□ -0.57
RTN3-205ENST00000356000 C9orf129Q5T035 196 aaKnown RBP11.5□□□□□ -0.57
RTN3-205ENST00000356000 C20orf173Q96LM9 149 aa11.5□□□□□ -0.57
RTN3-205ENST00000356000 HILS1P60008 231 aa11.5□□□□□ -0.57
RTN3-205ENST00000356000 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
RTN3-205ENST00000356000 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
RTN3-205ENST00000356000 NDUFA1O15239 70 aa11.49□□□□□ -0.57
RTN3-205ENST00000356000 COX7A1P24310 79 aa11.49□□□□□ -0.57
RTN3-205ENST00000356000 APRG1Q8IVJ8 170 aa11.49□□□□□ -0.57
RTN3-205ENST00000356000 BRK1Q8WUW1 75 aa11.49□□□□□ -0.57
RTN3-205ENST00000356000 M0QY20 66 aa11.49□□□□□ -0.57
RTN3-205ENST00000356000 CCL17Q92583 94 aa11.49□□□□□ -0.57
RTN3-205ENST00000356000 CD28P10747 220 aa11.48□□□□□ -0.57
RTN3-205ENST00000356000 ASPMQ8IZT6 3477 aa11.47□□□□□ -0.57
RTN3-205ENST00000356000 IGHV3-49A0A0A0MS15 119 aa11.47□□□□□ -0.57
RTN3-205ENST00000356000 TRAV23DV6A0A075B6W5 121 aa11.46□□□□□ -0.57
RTN3-205ENST00000356000 COPS9Q8WXC6 57 aa11.46□□□□□ -0.57
RTN3-205ENST00000356000 U3KQE9 123 aa11.46□□□□□ -0.57
RTN3-205ENST00000356000 SOSTDC1Q6X4U4 206 aa11.46□□□□□ -0.58
RTN3-205ENST00000356000 KALRNO60229 2985 aa11.45□□□□□ -0.58
RTN3-205ENST00000356000 ATP5EP2Q5VTU8 51 aa11.45□□□□□ -0.58
RTN3-205ENST00000356000 OVOL2Q9BRP0 275 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms