RNA–Protein interactions for RNA: ENST00000355852.6

PCBP4-202, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-202ENST00000355852 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
PCBP4-202ENST00000355852 CFC1BP0CG36 223 aa12.21□□□□□ -0.45
PCBP4-202ENST00000355852 CFC1P0CG37 223 aa12.21□□□□□ -0.45
PCBP4-202ENST00000355852 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
PCBP4-202ENST00000355852 TMEM141Q96I45 108 aa12.21□□□□□ -0.45
PCBP4-202ENST00000355852 LINC00477Q96M19 166 aa12.21□□□□□ -0.45
PCBP4-202ENST00000355852 PRO1854Q9UHT4 67 aa12.21□□□□□ -0.45
PCBP4-202ENST00000355852 TRRAPQ9Y4A5 3859 aa12.21□□□□□ -0.45
PCBP4-202ENST00000355852 H3BVH4 76 aa12.21□□□□□ -0.46
PCBP4-202ENST00000355852 SCGB1C2P0DMR2 95 aa12.21□□□□□ -0.46
PCBP4-202ENST00000355852 Q6Q795 121 aa12.21□□□□□ -0.46
PCBP4-202ENST00000355852 PTH2Q96A98 100 aa12.21□□□□□ -0.46
PCBP4-202ENST00000355852 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
PCBP4-202ENST00000355852 CRYGDP07320 174 aa12.2□□□□□ -0.46
PCBP4-202ENST00000355852 RHODO00212 210 aa12.2□□□□□ -0.46
PCBP4-202ENST00000355852 ANKRD29Q8N6D5 301 aa12.2□□□□□ -0.46
PCBP4-202ENST00000355852 LINC00482Q8N8I6 264 aa12.2□□□□□ -0.46
PCBP4-202ENST00000355852 TRAV21A0A0B4J279 112 aa12.19□□□□□ -0.46
PCBP4-202ENST00000355852 PMVKQ15126 192 aa12.19□□□□□ -0.46
PCBP4-202ENST00000355852 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
PCBP4-202ENST00000355852 P0DMU3 169 aa12.18□□□□□ -0.46
PCBP4-202ENST00000355852 FAM231AP0DMU4 169 aa12.18□□□□□ -0.46
PCBP4-202ENST00000355852 FAM231CP0DMU5 169 aa12.18□□□□□ -0.46
PCBP4-202ENST00000355852 TIMM17AQ99595 171 aa12.18□□□□□ -0.46
PCBP4-202ENST00000355852 IGIPA6NJ69 53 aa12.18□□□□□ -0.46
PCBP4-202ENST00000355852 SHISA2Q6UWI4 295 aa12.18□□□□□ -0.46
PCBP4-202ENST00000355852 C16orf92Q96LL3 132 aa12.18□□□□□ -0.46
PCBP4-202ENST00000355852 TRBV7-9A0A0J9YWB2 115 aa12.17□□□□□ -0.46
PCBP4-202ENST00000355852 SLC25A20O43772 301 aa12.17□□□□□ -0.46
PCBP4-202ENST00000355852 TMEM61Q8N0U2 210 aa12.16□□□□□ -0.46
PCBP4-202ENST00000355852 RPL39LQ96EH5 51 aaKnown RBP12.16□□□□□ -0.46
PCBP4-202ENST00000355852 A0A0B4J2C4 111 aa12.16□□□□□ -0.46
PCBP4-202ENST00000355852 NXPH4O95158 308 aa12.16□□□□□ -0.46
PCBP4-202ENST00000355852 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
PCBP4-202ENST00000355852 PHLDA3Q9Y5J5 127 aa12.16□□□□□ -0.46
PCBP4-202ENST00000355852 S100A4P26447 101 aaKnown RBP12.15□□□□□ -0.46
PCBP4-202ENST00000355852 GAGE2BQ13066 116 aa12.15□□□□□ -0.46
PCBP4-202ENST00000355852 GAGE2EQ4V326 116 aa12.15□□□□□ -0.46
PCBP4-202ENST00000355852 SPATA3Q8NHX4 192 aa12.15□□□□□ -0.46
PCBP4-202ENST00000355852 GAGE2DQ9UEU5 116 aa12.15□□□□□ -0.46
PCBP4-202ENST00000355852 APRG1Q8IVJ8 170 aa12.15□□□□□ -0.47
PCBP4-202ENST00000355852 ZFAND2AQ8N6M9 145 aa12.15□□□□□ -0.47
PCBP4-202ENST00000355852 DCANP1Q8TF63 244 aa12.15□□□□□ -0.47
PCBP4-202ENST00000355852 SOCS3O14543 225 aa12.14□□□□□ -0.47
PCBP4-202ENST00000355852 TSHBP01222 138 aa12.14□□□□□ -0.47
PCBP4-202ENST00000355852 RPL13AP40429 203 aaKnown RBP12.14□□□□□ -0.47
PCBP4-202ENST00000355852 C14orf178Q8N769 122 aaPredicted RBP12.14□□□□□ -0.47
PCBP4-202ENST00000355852 AMELXQ99217 191 aa12.14□□□□□ -0.47
PCBP4-202ENST00000355852 VCYO14598 125 aa12.13□□□□□ -0.47
PCBP4-202ENST00000355852 SNCGO76070 127 aa12.13□□□□□ -0.47
PCBP4-202ENST00000355852 DUSP14O95147 198 aaKnown RBP12.13□□□□□ -0.47
PCBP4-202ENST00000355852 IGHV3-33P01772 117 aa12.13□□□□□ -0.47
PCBP4-202ENST00000355852 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
PCBP4-202ENST00000355852 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
PCBP4-202ENST00000355852 PRR9Q5T870 116 aa12.13□□□□□ -0.47
PCBP4-202ENST00000355852 MRPL23Q16540 153 aaKnown RBP12.13□□□□□ -0.47
PCBP4-202ENST00000355852 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
PCBP4-202ENST00000355852 SFTA2Q6UW10 78 aa12.13□□□□□ -0.47
PCBP4-202ENST00000355852 MDFIQ99750 246 aa12.13□□□□□ -0.47
PCBP4-202ENST00000355852 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
PCBP4-202ENST00000355852 J3QQQ9 107 aa12.12□□□□□ -0.47
PCBP4-202ENST00000355852 NDUFV3P56181 108 aaKnown RBP12.12□□□□□ -0.47
PCBP4-202ENST00000355852 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
PCBP4-202ENST00000355852 C20orf173Q96LM9 149 aa12.12□□□□□ -0.47
PCBP4-202ENST00000355852 FAM19A4Q96LR4 140 aa12.12□□□□□ -0.47
PCBP4-202ENST00000355852 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
PCBP4-202ENST00000355852 K7EQG2 157 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 ID1P41134 155 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 ATXN8Q156A1 80 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
PCBP4-202ENST00000355852 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 TP53TG1Q9Y2A0 90 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 A0A0J9YX75 114 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 GAGE12JA6NER3 117 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 GAGE7O76087 117 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 IGLV1-51P01701 117 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 MGPP08493 103 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 GAGE12FP0CL80 117 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 GAGE12GP0CL81 117 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 GAGE12IP0CL82 117 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 LGALS3P17931 250 aaKnown RBP12.11□□□□□ -0.47
PCBP4-202ENST00000355852 SNRPD3P62318 126 aaKnown RBP12.11□□□□□ -0.47
PCBP4-202ENST00000355852 GAGE4Q13068 117 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 Q6ZQT7 251 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
PCBP4-202ENST00000355852 ANK2Q01484 3957 aa12.1□□□□□ -0.47
PCBP4-202ENST00000355852 C9JAW5 83 aa12.1□□□□□ -0.47
PCBP4-202ENST00000355852 LEPROTO15243 131 aa12.1□□□□□ -0.47
PCBP4-202ENST00000355852 SORL1Q92673 2214 aa12.1□□□□□ -0.47
PCBP4-202ENST00000355852 IFITM1P13164 125 aa12.1□□□□□ -0.47
PCBP4-202ENST00000355852 LINC00315P59091 139 aa12.1□□□□□ -0.47
PCBP4-202ENST00000355852 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
PCBP4-202ENST00000355852 PKD1L1Q8TDX9 2849 aa12.09□□□□□ -0.47
PCBP4-202ENST00000355852 TRAV25A0A0B4J276 109 aa12.09□□□□□ -0.47
PCBP4-202ENST00000355852 TRBV6-5A0A0K0K1A5 114 aa12.09□□□□□ -0.47
PCBP4-202ENST00000355852 TSPEAR-AS2P59090 65 aa12.09□□□□□ -0.47
PCBP4-202ENST00000355852 ANXA2RQ3ZCQ2 193 aa12.09□□□□□ -0.47
PCBP4-202ENST00000355852 TTC32Q5I0X7 151 aa12.09□□□□□ -0.47
PCBP4-202ENST00000355852 TRBV30A0A0K0K1B3 111 aa12.08□□□□□ -0.48
PCBP4-202ENST00000355852 A4D1N5 150 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms