RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RASL11AQ6T310 242 aa10.88□□□□□ -0.67
PDLIM7-201ENST00000355572 LINC00269Q8N2A0 174 aa10.88□□□□□ -0.67
PDLIM7-201ENST00000355572 C20orf203Q8NBC4 194 aa10.88□□□□□ -0.67
PDLIM7-201ENST00000355572 C1orf43Q9BWL3 253 aa10.88□□□□□ -0.67
PDLIM7-201ENST00000355572 DPH3P1Q9H4G8 78 aa10.88□□□□□ -0.67
PDLIM7-201ENST00000355572 Q0VG73 95 aa10.87□□□□□ -0.67
PDLIM7-201ENST00000355572 SCXQ7RTU7 201 aa10.87□□□□□ -0.67
PDLIM7-201ENST00000355572 GATD1Q8NB37 220 aa10.87□□□□□ -0.67
PDLIM7-201ENST00000355572 MYCBP2O75592 4640 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 TRBV25-1A0A075B6N4 114 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 IGHV1-24A0A0C4DH33 117 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 USP17L23D6RBM5 183 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 GAS8-AS1O95177 125 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 HLA-DQA1P01909 254 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 CRPP02741 224 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 TRGC1P0CF51 173 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 KCNIP4Q6PIL6 250 aa10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 RPL39LQ96EH5 51 aaKnown RBP10.86□□□□□ -0.67
PDLIM7-201ENST00000355572 IGLV10-54A0A075B6I4 117 aa10.85□□□□□ -0.67
PDLIM7-201ENST00000355572 XKRY2A2RUG3 117 aa10.85□□□□□ -0.67
PDLIM7-201ENST00000355572 SCO1O75880 301 aa10.85□□□□□ -0.67
PDLIM7-201ENST00000355572 PRSS1P07477 247 aa10.85□□□□□ -0.67
PDLIM7-201ENST00000355572 TWIST1Q15672 202 aa10.85□□□□□ -0.67
PDLIM7-201ENST00000355572 WDR73Q6P4I2 378 aa10.85□□□□□ -0.67
PDLIM7-201ENST00000355572 NIT2Q9NQR4 276 aa10.85□□□□□ -0.67
PDLIM7-201ENST00000355572 BIN3Q9NQY0 253 aa10.85□□□□□ -0.67
PDLIM7-201ENST00000355572 CEBPGP53567 150 aa10.84□□□□□ -0.67
PDLIM7-201ENST00000355572 KRTAP10-4P60372 401 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-201ENST00000355572 TMEM97Q5BJF2 176 aa10.84□□□□□ -0.67
PDLIM7-201ENST00000355572 SRRM2Q9UQ35 2752 aaKnown RBP10.83□□□□□ -0.68
PDLIM7-201ENST00000355572 H7C1H1 209 aa10.83□□□□□ -0.68
PDLIM7-201ENST00000355572 GATCO43716 136 aaKnown RBP10.83□□□□□ -0.68
PDLIM7-201ENST00000355572 MIAQ16674 131 aa10.83□□□□□ -0.68
PDLIM7-201ENST00000355572 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
PDLIM7-201ENST00000355572 LINC00528Q8N1L1 170 aa10.83□□□□□ -0.68
PDLIM7-201ENST00000355572 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
PDLIM7-201ENST00000355572 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
PDLIM7-201ENST00000355572 REG3AQ06141 175 aa10.82□□□□□ -0.68
PDLIM7-201ENST00000355572 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.82□□□□□ -0.68
PDLIM7-201ENST00000355572 TMEM243Q9BU79 118 aa10.82□□□□□ -0.68
PDLIM7-201ENST00000355572 SMCO4Q9NRQ5 59 aa10.82□□□□□ -0.68
PDLIM7-201ENST00000355572 NAT8Q9UHE5 227 aa10.82□□□□□ -0.68
PDLIM7-201ENST00000355572 HERC1Q15751 4861 aa10.82□□□□□ -0.68
PDLIM7-201ENST00000355572 PANO1I0J062 215 aa10.81□□□□□ -0.68
PDLIM7-201ENST00000355572 CIRBP-AS1Q8TBR5 109 aa10.81□□□□□ -0.68
PDLIM7-201ENST00000355572 SMIM7Q9BQ49 75 aa10.81□□□□□ -0.68
PDLIM7-201ENST00000355572 C7orf77A4D0Y5 90 aa10.8□□□□□ -0.68
PDLIM7-201ENST00000355572 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
PDLIM7-201ENST00000355572 LINC01551Q86U37 167 aa10.8□□□□□ -0.68
PDLIM7-201ENST00000355572 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
PDLIM7-201ENST00000355572 PKIAP61925 76 aa10.79□□□□□ -0.68
PDLIM7-201ENST00000355572 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
PDLIM7-201ENST00000355572 TMEM242Q9NWH2 141 aa10.79□□□□□ -0.68
PDLIM7-201ENST00000355572 SLPIP03973 132 aa10.78□□□□□ -0.68
PDLIM7-201ENST00000355572 AMTP48728 403 aa10.78□□□□□ -0.68
PDLIM7-201ENST00000355572 TMEM241Q24JQ0 296 aa10.78□□□□□ -0.68
PDLIM7-201ENST00000355572 RNF185Q96GF1 192 aa10.78□□□□□ -0.68
PDLIM7-201ENST00000355572 CTDSP1Q9GZU7 261 aa10.78□□□□□ -0.68
PDLIM7-201ENST00000355572 RPS10P5Q9NQ39 176 aa10.78□□□□□ -0.68
PDLIM7-201ENST00000355572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
PDLIM7-201ENST00000355572 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
PDLIM7-201ENST00000355572 COTL1Q14019 142 aa10.77□□□□□ -0.69
PDLIM7-201ENST00000355572 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.77□□□□□ -0.69
PDLIM7-201ENST00000355572 FAM231BA6NCW3 169 aa10.76□□□□□ -0.69
PDLIM7-201ENST00000355572 A8MWL6 223 aa10.76□□□□□ -0.69
PDLIM7-201ENST00000355572 RPS10P46783 165 aaKnown RBP10.76□□□□□ -0.69
PDLIM7-201ENST00000355572 CT83Q5H943 113 aa10.76□□□□□ -0.69
PDLIM7-201ENST00000355572 CBLN2Q8IUK8 224 aa10.76□□□□□ -0.69
PDLIM7-201ENST00000355572 V9GYV3 84 aa10.76□□□□□ -0.69
PDLIM7-201ENST00000355572 SDHAF1A6NFY7 115 aa10.75□□□□□ -0.69
PDLIM7-201ENST00000355572 HIGD1CA8MV81 97 aa10.75□□□□□ -0.69
PDLIM7-201ENST00000355572 C14orf177Q52M58 125 aa10.75□□□□□ -0.69
PDLIM7-201ENST00000355572 C9orf163Q8N9P6 203 aa10.75□□□□□ -0.69
PDLIM7-201ENST00000355572 RPL23P62829 140 aaKnown RBP10.74□□□□□ -0.69
PDLIM7-201ENST00000355572 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
PDLIM7-201ENST00000355572 OSTCQ9NRP0 149 aa10.74□□□□□ -0.69
PDLIM7-201ENST00000355572 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 PPP1R2P9O14990 202 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 MT-ND4LP03901 98 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 SDIM1Q6ZPB5 146 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 AMN1Q8IY45 258 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 C15orf56Q8N910 161 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 ISOC2Q96AB3 205 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 ANAPC16Q96DE5 110 aa10.73□□□□□ -0.69
PDLIM7-201ENST00000355572 DMBT1Q9UGM3 2413 aaPredicted RBP10.72□□□□□ -0.69
PDLIM7-201ENST00000355572 UBE2L6O14933 153 aa10.72□□□□□ -0.69
PDLIM7-201ENST00000355572 TSHBP01222 138 aa10.72□□□□□ -0.69
PDLIM7-201ENST00000355572 RAB4AP20338 218 aa10.72□□□□□ -0.69
PDLIM7-201ENST00000355572 ADIRFQ15847 76 aa10.72□□□□□ -0.69
PDLIM7-201ENST00000355572 LRP1Q07954 4544 aaKnown RBP10.72□□□□□ -0.69
PDLIM7-201ENST00000355572 TRAV8-4A0A0B4J246 113 aa10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 TRBV6-5A0A0K0K1A5 114 aa10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 A0A1B0GUT8 65 aa10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 NCR2O95944 276 aa10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 PLA2G1BP04054 148 aaKnown RBP10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 HNRNPA3P51991 378 aaKnown RBP10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms