RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PTH2Q96A98 100 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 APCP25054 2843 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 TMEM223A0PJW6 202 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 RHODO00212 210 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 SCGB1C2P0DMR2 95 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 ITPR3Q14573 2671 aa14.3□□□□□ -0.12
COL13A1-201ENST00000354547 A0A1W2PRX2 142 aa14.3□□□□□ -0.12
COL13A1-201ENST00000354547 NFE4Q86UQ8 179 aa14.3□□□□□ -0.12
COL13A1-201ENST00000354547 Q96MF0 132 aa14.29□□□□□ -0.12
COL13A1-201ENST00000354547 UBR5O95071 2799 aaPredicted RBP14.29□□□□□ -0.12
COL13A1-201ENST00000354547 TRAV8-3A0A0A6YYJ7 113 aa14.29□□□□□ -0.12
COL13A1-201ENST00000354547 SMAGPQ0VAQ4 97 aa14.29□□□□□ -0.12
COL13A1-201ENST00000354547 ACANP16112 2415 aa14.29□□□□□ -0.12
COL13A1-201ENST00000354547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.28□□□□□ -0.12
COL13A1-201ENST00000354547 IGKV2-29A2NJV5 120 aaPredicted RBP14.28□□□□□ -0.12
COL13A1-201ENST00000354547 A4D1N5 150 aa14.28□□□□□ -0.12
COL13A1-201ENST00000354547 J3QR89 54 aa14.28□□□□□ -0.12
COL13A1-201ENST00000354547 MTORP42345 2549 aa14.28□□□□□ -0.12
COL13A1-201ENST00000354547 A8MZ25 164 aa14.28□□□□□ -0.12
COL13A1-201ENST00000354547 LEPROTO15243 131 aa14.28□□□□□ -0.12
COL13A1-201ENST00000354547 SMCPP49901 116 aaPredicted RBP14.28□□□□□ -0.12
COL13A1-201ENST00000354547 FSHBP01225 129 aa14.27□□□□□ -0.12
COL13A1-201ENST00000354547 XCL2Q9UBD3 114 aa14.27□□□□□ -0.12
COL13A1-201ENST00000354547 GAGE12HA6NDE8 117 aa14.27□□□□□ -0.13
COL13A1-201ENST00000354547 AZU1P20160 251 aa14.27□□□□□ -0.13
COL13A1-201ENST00000354547 FLNAP21333 2647 aaKnown RBP14.27□□□□□ -0.13
COL13A1-201ENST00000354547 M0R2P5 195 aa14.26□□□□□ -0.13
COL13A1-201ENST00000354547 TCL1BO95988 128 aa14.26□□□□□ -0.13
COL13A1-201ENST00000354547 MAP6D1Q9H9H5 199 aa14.26□□□□□ -0.13
COL13A1-201ENST00000354547 MUSTN1Q8IVN3 82 aa14.26□□□□□ -0.13
COL13A1-201ENST00000354547 PRSS2P07478 247 aa14.25□□□□□ -0.13
COL13A1-201ENST00000354547 C10orf126Q8N4M7 172 aa14.25□□□□□ -0.13
COL13A1-201ENST00000354547 PEMTQ9UBM1 199 aa14.25□□□□□ -0.13
COL13A1-201ENST00000354547 PRO1854Q9UHT4 67 aa14.25□□□□□ -0.13
COL13A1-201ENST00000354547 NBPF19A0A087WUL8 3843 aa14.25□□□□□ -0.13
COL13A1-201ENST00000354547 NPC2P61916 151 aa14.25□□□□□ -0.13
COL13A1-201ENST00000354547 CFAP126Q5VTH2 177 aa14.25□□□□□ -0.13
COL13A1-201ENST00000354547 TMEM238C9JI98 176 aa14.24□□□□□ -0.13
COL13A1-201ENST00000354547 ZNF415Q09FC8 603 aa14.24□□□□□ -0.13
COL13A1-201ENST00000354547 IGHV3-30-3P0DP02 117 aa14.24□□□□□ -0.13
COL13A1-201ENST00000354547 RNF152Q8N8N0 203 aa14.24□□□□□ -0.13
COL13A1-201ENST00000354547 FAM104AQ969W3 186 aa14.24□□□□□ -0.13
COL13A1-201ENST00000354547 UBE2D3P61077 147 aa14.23□□□□□ -0.13
COL13A1-201ENST00000354547 UBE2D2P62837 147 aa14.23□□□□□ -0.13
COL13A1-201ENST00000354547 SIGMAR1Q99720 223 aa14.23□□□□□ -0.13
COL13A1-201ENST00000354547 TIMM21Q9BVV7 248 aa14.23□□□□□ -0.13
COL13A1-201ENST00000354547 A8MWV9 139 aa14.23□□□□□ -0.13
COL13A1-201ENST00000354547 DEFB113Q30KQ7 82 aa14.23□□□□□ -0.13
COL13A1-201ENST00000354547 Q1RN00 199 aa14.22□□□□□ -0.13
COL13A1-201ENST00000354547 EIF4EBP3O60516 100 aaPredicted RBP14.22□□□□□ -0.13
COL13A1-201ENST00000354547 SPINK8P0C7L1 97 aa14.22□□□□□ -0.13
COL13A1-201ENST00000354547 DEFB114Q30KQ6 69 aa14.21□□□□□ -0.13
COL13A1-201ENST00000354547 LINC00467Q9BRT7 94 aa14.21□□□□□ -0.13
COL13A1-201ENST00000354547 AKAP9Q99996 3911 aa14.21□□□□□ -0.14
COL13A1-201ENST00000354547 A0A0J9YXY3 114 aa14.2□□□□□ -0.14
COL13A1-201ENST00000354547 C4orf3Q8WVX3 66 aa14.2□□□□□ -0.14
COL13A1-201ENST00000354547 Q6ZUT4 128 aa14.2□□□□□ -0.14
COL13A1-201ENST00000354547 IGHV3-53P01767 116 aa14.2□□□□□ -0.14
COL13A1-201ENST00000354547 FOXI1Q12951 378 aa14.2□□□□□ -0.14
COL13A1-201ENST00000354547 CHCHD7Q9BUK0 85 aa14.19□□□□□ -0.14
COL13A1-201ENST00000354547 C1QTNF4Q9BXJ3 329 aa14.19□□□□□ -0.14
COL13A1-201ENST00000354547 LYRM7Q5U5X0 104 aa14.18□□□□□ -0.14
COL13A1-201ENST00000354547 INSP01308 110 aa14.18□□□□□ -0.14
COL13A1-201ENST00000354547 C11orf72Q8NBR9 251 aa14.18□□□□□ -0.14
COL13A1-201ENST00000354547 ZNF843Q8N446 348 aa14.17□□□□□ -0.14
COL13A1-201ENST00000354547 ERG28Q9UKR5 140 aa14.17□□□□□ -0.14
COL13A1-201ENST00000354547 SETXQ7Z333 2677 aaKnown RBP14.17□□□□□ -0.14
COL13A1-201ENST00000354547 UBE2D4Q9Y2X8 147 aa14.17□□□□□ -0.14
COL13A1-201ENST00000354547 PYGO1Q9Y3Y4 419 aa14.17□□□□□ -0.14
COL13A1-201ENST00000354547 MRPS36P82909 103 aaKnown RBP14.17□□□□□ -0.14
COL13A1-201ENST00000354547 NDUFA12Q9UI09 145 aa14.17□□□□□ -0.14
COL13A1-201ENST00000354547 TRGV1A0A0A0MS02 117 aa14.16□□□□□ -0.14
COL13A1-201ENST00000354547 IGHV3-33P01772 117 aa14.16□□□□□ -0.14
COL13A1-201ENST00000354547 ADAMTSL4-AS1Q5T5F5 129 aa14.16□□□□□ -0.14
COL13A1-201ENST00000354547 Q6ZSV7 163 aa14.16□□□□□ -0.14
COL13A1-201ENST00000354547 GEMIN7Q9H840 131 aaKnown RBP14.16□□□□□ -0.14
COL13A1-201ENST00000354547 HIST2H2BCQ6DN03 193 aa14.16□□□□□ -0.14
COL13A1-201ENST00000354547 DGAT2L7PQ6IED9 249 aa14.16□□□□□ -0.14
COL13A1-201ENST00000354547 TMEM263Q8WUH6 116 aaKnown RBP14.16□□□□□ -0.14
COL13A1-201ENST00000354547 STHQ8IWL8 128 aa14.15□□□□□ -0.14
COL13A1-201ENST00000354547 ODF3L2Q3SX64 289 aa14.15□□□□□ -0.14
COL13A1-201ENST00000354547 DAND5Q8N907 189 aa14.15□□□□□ -0.14
COL13A1-201ENST00000354547 Q8N2B8 174 aa14.15□□□□□ -0.15
COL13A1-201ENST00000354547 C9JAW5 83 aa14.14□□□□□ -0.15
COL13A1-201ENST00000354547 OXLD1Q5BKU9 147 aa14.14□□□□□ -0.15
COL13A1-201ENST00000354547 WFDC11Q8NEX6 87 aa14.14□□□□□ -0.15
COL13A1-201ENST00000354547 IGHV1-58A0A0C4DH39 117 aa14.13□□□□□ -0.15
COL13A1-201ENST00000354547 A8MTW9 85 aa14.13□□□□□ -0.15
COL13A1-201ENST00000354547 TRBV20-1A0A075B6N2 111 aa14.13□□□□□ -0.15
COL13A1-201ENST00000354547 A0A0U1RRA0 63 aa14.13□□□□□ -0.15
COL13A1-201ENST00000354547 CARD19Q96LW7 228 aa14.13□□□□□ -0.15
COL13A1-201ENST00000354547 SPATA25Q9BR10 227 aa14.12□□□□□ -0.15
COL13A1-201ENST00000354547 CDKN2A-AS1Q9UH64 79 aa14.12□□□□□ -0.15
COL13A1-201ENST00000354547 NDUFA7O95182 113 aa14.12□□□□□ -0.15
COL13A1-201ENST00000354547 ZNF625Q96I27 306 aaPredicted RBP14.12□□□□□ -0.15
COL13A1-201ENST00000354547 ANKRD29Q8N6D5 301 aa14.11□□□□□ -0.15
COL13A1-201ENST00000354547 VSIG2Q96IQ7 327 aa14.11□□□□□ -0.15
COL13A1-201ENST00000354547 EDA2RQ9HAV5 297 aa14.11□□□□□ -0.15
COL13A1-201ENST00000354547 SPANXA1Q9NS26 97 aa14.11□□□□□ -0.15
COL13A1-201ENST00000354547 DNAJC9-AS1A6NH13 148 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms