RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SLC25A26Q70HW3 274 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 OR10AC1Q8NH08 325 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 PFN4Q8NHR9 129 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 MUCL1Q96DR8 90 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ARHGAP5-AS1Q96IT6 56 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TEX37Q96LM6 180 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 AQP10Q96PS8 301 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 RTL8AQ9BWD3 113 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 DYNLRB1Q9NP97 96 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 PLIN4Q96Q06 1357 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TLN2Q9Y4G6 2542 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 A0A087WWC5 75 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 K7EP13 123 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 UBE2L6O14933 153 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 LEPROTO15243 131 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BKO60814 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 PITX3O75364 302 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BJP06899 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 CD7P09564 240 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 EVI2AP22794 236 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BOP23527 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BBP33778 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF80P51504 273 aaPredicted RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BDP58876 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BCP62807 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST2H2BEQ16778 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 VMA21Q3ZAQ7 101 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 C10orf128Q5T292 105 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 C1orf140Q5VVS0 124 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 C10orf113Q5VZT2 155 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 LYZL2Q7Z4W2 148 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 FAM19A2Q8N3H0 131 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 CNEP1R1Q8N9A8 125 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 PP6455Q8WZ26 134 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BHQ93079 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 GPR146Q96CH1 333 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BNQ99877 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BMQ99879 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H2BLQ99880 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 NAA38Q9BRA0 125 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM126AQ9H061 195 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 RABAC1Q9UI14 185 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ERG28Q9UKR5 140 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 EPDR1Q9UM22 224 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 IGHV1-69-2A0A0G2JMI3 117 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 A0A0J9YW62 118 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 ODAMA1E959 279 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 H3BT86 120 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 J3KT08 172 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 OR2H2O95918 312 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 NCR2O95944 276 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 IGKV1-5P01602 117 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 IGKV1-16P04430 117 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 FKBP2P26885 142 aaKnown RBP0.9□□□□□ -2.26
BRCA1-202ENST00000354071 MPV17P39210 176 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 RPS27P42677 84 aaKnown RBP0.9□□□□□ -2.26
BRCA1-202ENST00000354071 FOXA3P55318 350 aaPredicted RBP0.9□□□□□ -2.26
BRCA1-202ENST00000354071 INSL4Q14641 139 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 FXYD3Q14802 87 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 SPINK9Q5DT21 86 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 C12orf73Q69YU5 71 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 C2orf82Q6UX34 121 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 HIST3H2BBQ8N257 126 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 C10orf111Q8N326 155 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 C3orf56Q8N813 242 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 C11orf40Q8WZ69 217 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 IMMP2LQ96T52 175 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 SCRT1Q9BWW7 348 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 NPVFQ9HCQ7 196 aa0.9□□□□□ -2.26
BRCA1-202ENST00000354071 ANKRD31Q8N7Z5 1873 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV9-1A0A075B6T8 112 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV38-1A0A0B4J264 116 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV41A0A0B4J266 112 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM30CPA0ZSE6 113 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 C17orf51A8MQB3 221 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 F8W1H4 67 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 HMGN4O00479 90 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 NDUFA2O43678 99 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 KRTAP5-8O75690 187 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 NDUFA3O95167 84 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 IGHV3-30-3P0DP02 117 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 HTN1P15515 57 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 GZMHP20718 246 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 NPPCP23582 126 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 KRTAP12-2P59991 146 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 CST6Q15828 149 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 DEFB110Q30KQ9 67 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 ETDBQ3ZM63 59 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 PYY3Q5JQD4 70 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 GOLT1AQ6ZVE7 132 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 Q8IYB0 196 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 DEFB108BQ8NET1 73 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 OTOSQ8NHW6 89 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 BRK1Q8WUW1 75 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 PPDPFLQ8WWR9 84 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 SCGB3A1Q96QR1 104 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 BCL2L10Q9HD36 194 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 IL36BQ9NZH7 164 aa0.9□□□□□ -2.27
BRCA1-202ENST00000354071 TAAR3PQ9P1P4 343 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms