RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 IGLV11-55A0A075B6I3 123 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 C19orf71A6NCJ1 209 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 CTSGP08311 255 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 IGLV2-8P01709 118 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 GYPEP15421 78 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 Q8N7P7 452 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 Q8NA96 180 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
SMARCE1-202ENST00000348513 MSMPQ1L6U9 139 aa8.44□□□□□ -1.06
SMARCE1-202ENST00000348513 DEFB105AQ8NG35 78 aa8.44□□□□□ -1.06
SMARCE1-202ENST00000348513 PRR15LQ9BU68 103 aa8.44□□□□□ -1.06
SMARCE1-202ENST00000348513 A0A0J9YXY3 114 aa8.44□□□□□ -1.06
SMARCE1-202ENST00000348513 MYCNOSP40205 109 aa8.44□□□□□ -1.06
SMARCE1-202ENST00000348513 TMEM263Q8WUH6 116 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-202ENST00000348513 TRBV6-1A0A0K0K1D8 114 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 A8MZ25 164 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 IGKV1-17P01599 117 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 PRAC2D3DTV9 90 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 UBE2D3P61077 147 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 UBE2D2P62837 147 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 PATE2Q6UY27 113 aa8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1-202ENST00000348513 E7EUB6 86 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 PSPHP1O15172 72 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 CXCL6P80162 114 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 NEXN-AS1Q8NBZ9 246 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 PTPRQQ9UMZ3 2332 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 CREBBPQ92793 2442 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 TECTAO75443 2155 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 C19orf84I3L1E1 186 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 DAZAP2Q15038 168 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 ODF3L1Q8IXM7 274 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 U3KQK5 164 aa8.42□□□□□ -1.06
SMARCE1-202ENST00000348513 A0A0J9YXV3 536 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 C16orf74Q96GX8 76 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 DEFB135Q30KP9 77 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 MBD6Q96DN6 1003 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 IGHV1-58A0A0C4DH39 117 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 NCR3O14931 201 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 K7EQD1 137 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 TEX22C9J3V5 150 aa8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-202ENST00000348513 SPART-AS1P0CW21 52 aa8.4□□□□□ -1.06
SMARCE1-202ENST00000348513 PLCE1Q9P212 2302 aa8.4□□□□□ -1.07
SMARCE1-202ENST00000348513 FAM19A3Q7Z5A8 133 aa8.4□□□□□ -1.07
SMARCE1-202ENST00000348513 IL17DQ8TAD2 202 aa8.4□□□□□ -1.07
SMARCE1-202ENST00000348513 NDUFB1O75438 58 aa8.39□□□□□ -1.07
SMARCE1-202ENST00000348513 TNRC6BQ9UPQ9 1833 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-202ENST00000348513 PRYO14603 147 aa8.39□□□□□ -1.07
SMARCE1-202ENST00000348513 TTC28Q96AY4 2481 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 UNQ9165/PRO28630Q6UXU0 137 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 LINC01561Q8N1V8 128 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 FAM167A-AS1Q96KT0 104 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 NACAE9PAV3 2078 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 LRCOL1A6NCL2 159 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 ODF3Q96PU9 254 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 A0A087WVE0 104 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 IGLV2-14P01704 120 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 CCL18P55774 89 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 HIGD2BQ4VC39 106 aa8.38□□□□□ -1.07
SMARCE1-202ENST00000348513 DNAJC9-AS1A6NH13 148 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 IGLV1-47P01700 117 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 CRIP2P52943 208 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 EBI3Q14213 229 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 ESRGQ1W209 222 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 CAMK2N2Q96S95 79 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 LENEPQ9Y5L5 61 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 IGHV4-28A0A0C4DH34 117 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 NANOS2P60321 138 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 C4orf3Q8WVX3 66 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 RPL39P62891 51 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 Q6ZSR3 168 aa8.37□□□□□ -1.07
SMARCE1-202ENST00000348513 LINC01548A6NM66 108 aa8.36□□□□□ -1.07
SMARCE1-202ENST00000348513 BPY2O14599 106 aa8.36□□□□□ -1.07
SMARCE1-202ENST00000348513 HHLA3Q9XRX5 114 aa8.36□□□□□ -1.07
SMARCE1-202ENST00000348513 C22orf34Q6ZV56 151 aa8.35□□□□□ -1.07
SMARCE1-202ENST00000348513 FAM19A4Q96LR4 140 aa8.35□□□□□ -1.07
SMARCE1-202ENST00000348513 PLA2G5P39877 138 aa8.35□□□□□ -1.07
SMARCE1-202ENST00000348513 SCXQ7RTU7 201 aa8.35□□□□□ -1.07
SMARCE1-202ENST00000348513 CRYGDP07320 174 aa8.34□□□□□ -1.07
SMARCE1-202ENST00000348513 A6NDX4 124 aa8.34□□□□□ -1.07
SMARCE1-202ENST00000348513 UBE2D1P51668 147 aa8.33□□□□□ -1.08
SMARCE1-202ENST00000348513 PRO0461Q9UI25 63 aa8.33□□□□□ -1.08
SMARCE1-202ENST00000348513 CCKP06307 115 aa8.33□□□□□ -1.08
SMARCE1-202ENST00000348513 ZNF106Q9H2Y7 1883 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-202ENST00000348513 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
SMARCE1-202ENST00000348513 URB1-AS1Q96HZ7 61 aa8.32□□□□□ -1.08
SMARCE1-202ENST00000348513 SMAD5-AS1Q9Y6J3 95 aa8.32□□□□□ -1.08
SMARCE1-202ENST00000348513 FREM1Q5H8C1 2179 aa8.32□□□□□ -1.08
SMARCE1-202ENST00000348513 ETDCA0A1B0GVM5 59 aa8.32□□□□□ -1.08
SMARCE1-202ENST00000348513 FBXL19-AS1Q494R0 122 aa8.32□□□□□ -1.08
SMARCE1-202ENST00000348513 C9orf47Q6ZRZ4 202 aa8.32□□□□□ -1.08
SMARCE1-202ENST00000348513 LINC00336Q6ZUF6 198 aa8.32□□□□□ -1.08
SMARCE1-202ENST00000348513 SRCAPQ6ZRS2 3230 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms