RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
APP-201ENST00000346798 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
APP-201ENST00000346798 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
APP-201ENST00000346798 SLURP1P55000 103 aa8.72□□□□□ -1.01
APP-201ENST00000346798 LEPROTO15243 131 aa8.71□□□□□ -1.01
APP-201ENST00000346798 TEN1Q86WV5 123 aa8.71□□□□□ -1.01
APP-201ENST00000346798 TNFRSF18Q9Y5U5 241 aa8.71□□□□□ -1.01
APP-201ENST00000346798 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
APP-201ENST00000346798 A0A1B0GV72 72 aa8.71□□□□□ -1.02
APP-201ENST00000346798 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
APP-201ENST00000346798 ELANEP08246 267 aa8.71□□□□□ -1.02
APP-201ENST00000346798 XGP55808 180 aa8.71□□□□□ -1.02
APP-201ENST00000346798 PPDPFLQ8WWR9 84 aa8.71□□□□□ -1.02
APP-201ENST00000346798 CIDEAO60543 219 aa8.71□□□□□ -1.02
APP-201ENST00000346798 NSUN5P1Q3KNT7 163 aa8.71□□□□□ -1.02
APP-201ENST00000346798 Q6ZSV7 163 aa8.71□□□□□ -1.02
APP-201ENST00000346798 IGHV3OR16-12A0A075B7B8 117 aa8.7□□□□□ -1.02
APP-201ENST00000346798 SLC25A20O43772 301 aa8.7□□□□□ -1.02
APP-201ENST00000346798 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
APP-201ENST00000346798 RHOHQ15669 191 aa8.7□□□□□ -1.02
APP-201ENST00000346798 TIMM21Q9BVV7 248 aa8.7□□□□□ -1.02
APP-201ENST00000346798 A0A0U1RRA0 63 aa8.7□□□□□ -1.02
APP-201ENST00000346798 DAND5Q8N907 189 aa8.7□□□□□ -1.02
APP-201ENST00000346798 NIPBLQ6KC79 2804 aaeCLIP8.7□□□□□ -1.02
APP-201ENST00000346798 BRI3O95415 125 aa8.7□□□□□ -1.02
APP-201ENST00000346798 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
APP-201ENST00000346798 Q6ZSN1 163 aa8.69□□□□□ -1.02
APP-201ENST00000346798 TRGV11A0A075B6L2 103 aa8.69□□□□□ -1.02
APP-201ENST00000346798 TRBV20-1A0A075B6N2 111 aa8.69□□□□□ -1.02
APP-201ENST00000346798 A0A0J9YXY3 114 aa8.69□□□□□ -1.02
APP-201ENST00000346798 Q6ZUT4 128 aa8.68□□□□□ -1.02
APP-201ENST00000346798 SCGB1A1P11684 91 aa8.68□□□□□ -1.02
APP-201ENST00000346798 PRORYQ9H606 182 aa8.68□□□□□ -1.02
APP-201ENST00000346798 C11orf44Q8N8P7 122 aa8.68□□□□□ -1.02
APP-201ENST00000346798 TMEM263Q8WUH6 116 aaKnown RBP8.68□□□□□ -1.02
APP-201ENST00000346798 ATP6V0E2Q8NHE4 81 aa8.67□□□□□ -1.02
APP-201ENST00000346798 ZNF625Q96I27 306 aaPredicted RBP8.67□□□□□ -1.02
APP-201ENST00000346798 LINC01587Q99440 93 aa8.67□□□□□ -1.02
APP-201ENST00000346798 MTORP42345 2549 aa8.67□□□□□ -1.02
APP-201ENST00000346798 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
APP-201ENST00000346798 NTN5Q8WTR8 489 aaPredicted RBP8.67□□□□□ -1.02
APP-201ENST00000346798 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
APP-201ENST00000346798 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
APP-201ENST00000346798 CRYBA4P53673 196 aa8.66□□□□□ -1.02
APP-201ENST00000346798 TMEM61Q8N0U2 210 aa8.66□□□□□ -1.02
APP-201ENST00000346798 ODF3Q96PU9 254 aa8.66□□□□□ -1.02
APP-201ENST00000346798 RBMY1BA6NDE4 496 aaKnown RBP8.66□□□□□ -1.02
APP-201ENST00000346798 RBMY1EA6NEQ0 496 aaKnown RBP8.66□□□□□ -1.02
APP-201ENST00000346798 RBMY1DP0C7P1 496 aaKnown RBP8.66□□□□□ -1.02
APP-201ENST00000346798 LINC01356Q8N9X3 169 aa8.65□□□□□ -1.02
APP-201ENST00000346798 FN1P02751 2386 aaKnown RBP8.65□□□□□ -1.02
APP-201ENST00000346798 ACANP16112 2415 aa8.65□□□□□ -1.03
APP-201ENST00000346798 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
APP-201ENST00000346798 TRIAP1O43715 76 aa8.64□□□□□ -1.03
APP-201ENST00000346798 DGAT2L7PQ6IED9 249 aa8.64□□□□□ -1.03
APP-201ENST00000346798 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
APP-201ENST00000346798 XCL2Q9UBD3 114 aa8.64□□□□□ -1.03
APP-201ENST00000346798 TRAV26-1A0A087WT03 109 aa8.64□□□□□ -1.03
APP-201ENST00000346798 M0R2P5 195 aa8.64□□□□□ -1.03
APP-201ENST00000346798 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
APP-201ENST00000346798 VPREB3Q9UKI3 123 aa8.64□□□□□ -1.03
APP-201ENST00000346798 IGHV3-53P01767 116 aa8.64□□□□□ -1.03
APP-201ENST00000346798 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
APP-201ENST00000346798 FAM104AQ969W3 186 aa8.64□□□□□ -1.03
APP-201ENST00000346798 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
APP-201ENST00000346798 H3BMM0 161 aa8.63□□□□□ -1.03
APP-201ENST00000346798 DYNLRB2Q8TF09 96 aa8.63□□□□□ -1.03
APP-201ENST00000346798 LINC01620Q4KN68 170 aa8.63□□□□□ -1.03
APP-201ENST00000346798 CLUHP3Q96NS8 147 aa8.63□□□□□ -1.03
APP-201ENST00000346798 ZNF702PQ9H963 129 aa8.63□□□□□ -1.03
APP-201ENST00000346798 A0A0B4J2C4 111 aa8.62□□□□□ -1.03
APP-201ENST00000346798 IGHV1-58A0A0C4DH39 117 aa8.62□□□□□ -1.03
APP-201ENST00000346798 A0A1W2PRX2 142 aa8.62□□□□□ -1.03
APP-201ENST00000346798 ATXN8Q156A1 80 aa8.62□□□□□ -1.03
APP-201ENST00000346798 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
APP-201ENST00000346798 NDUFA7O95182 113 aa8.62□□□□□ -1.03
APP-201ENST00000346798 PRB1P04280 392 aa8.62□□□□□ -1.03
APP-201ENST00000346798 MRPS36P82909 103 aaKnown RBP8.61□□□□□ -1.03
APP-201ENST00000346798 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
APP-201ENST00000346798 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
APP-201ENST00000346798 VSIG2Q96IQ7 327 aa8.61□□□□□ -1.03
APP-201ENST00000346798 GATA3P23771 443 aa8.6□□□□□ -1.03
APP-201ENST00000346798 LITAFQ99732 161 aa8.6□□□□□ -1.03
APP-201ENST00000346798 UBE2D4Q9Y2X8 147 aa8.6□□□□□ -1.03
APP-201ENST00000346798 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
APP-201ENST00000346798 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
APP-201ENST00000346798 SBSPONQ8IVN8 264 aa8.6□□□□□ -1.03
APP-201ENST00000346798 RNF183Q96D59 192 aa8.6□□□□□ -1.03
APP-201ENST00000346798 ICOSQ9Y6W8 199 aa8.6□□□□□ -1.03
APP-201ENST00000346798 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
APP-201ENST00000346798 RPL13AP40429 203 aaKnown RBP8.59□□□□□ -1.03
APP-201ENST00000346798 ANAPC13Q9BS18 74 aa8.59□□□□□ -1.03
APP-201ENST00000346798 MAP6D1Q9H9H5 199 aa8.59□□□□□ -1.03
APP-201ENST00000346798 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
APP-201ENST00000346798 TEX29Q8N6K0 151 aa8.59□□□□□ -1.04
APP-201ENST00000346798 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.59□□□□□ -1.04
APP-201ENST00000346798 CRLF1O75462 422 aa8.58□□□□□ -1.04
APP-201ENST00000346798 COX6A2Q02221 97 aa8.58□□□□□ -1.04
APP-201ENST00000346798 ZFAND6Q6FIF0 208 aa8.58□□□□□ -1.04
APP-201ENST00000346798 TMEM89A2RUT3 159 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms