RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 K7ERS5 55 aa17.29■□□□□ 0.36
NPAS3-201ENST00000346562 SYCNQ0VAF6 134 aa17.29■□□□□ 0.36
NPAS3-201ENST00000346562 LY6G6DO95868 133 aa17.29■□□□□ 0.36
NPAS3-201ENST00000346562 TMEM223A0PJW6 202 aa17.28■□□□□ 0.36
NPAS3-201ENST00000346562 C11orf1Q9H5F2 150 aa17.28■□□□□ 0.36
NPAS3-201ENST00000346562 LINC00322Q6ZN03 302 aaPredicted RBP17.27■□□□□ 0.36
NPAS3-201ENST00000346562 SPATA12Q7Z6I5 190 aa17.27■□□□□ 0.36
NPAS3-201ENST00000346562 ZNF843Q8N446 348 aa17.27■□□□□ 0.36
NPAS3-201ENST00000346562 TRAV23DV6A0A075B6W5 121 aa17.27■□□□□ 0.36
NPAS3-201ENST00000346562 SVIPQ8NHG7 77 aa17.27■□□□□ 0.35
NPAS3-201ENST00000346562 ATP5EP2Q5VTU8 51 aa17.26■□□□□ 0.35
NPAS3-201ENST00000346562 CDKN2A-AS1Q9UH64 79 aa17.25■□□□□ 0.35
NPAS3-201ENST00000346562 EBI3Q14213 229 aa17.25■□□□□ 0.35
NPAS3-201ENST00000346562 IGLV4-3A0A075B6K6 122 aa17.25■□□□□ 0.35
NPAS3-201ENST00000346562 DOCK9Q9BZ29 2069 aa17.24■□□□□ 0.35
NPAS3-201ENST00000346562 FRMD6-AS1P0C7T7 363 aa17.23■□□□□ 0.35
NPAS3-201ENST00000346562 TMEM131Q92545 1883 aa17.23■□□□□ 0.35
NPAS3-201ENST00000346562 MALRD1Q5VYJ5 2156 aa17.23■□□□□ 0.35
NPAS3-201ENST00000346562 PSMG3-AS1Q96PY0 264 aa17.23■□□□□ 0.35
NPAS3-201ENST00000346562 ZNF22P17026 224 aaPredicted RBP17.22■□□□□ 0.35
NPAS3-201ENST00000346562 LY6LH3BQJ8 138 aa17.22■□□□□ 0.35
NPAS3-201ENST00000346562 IGLV2-8P01709 118 aa17.22■□□□□ 0.35
NPAS3-201ENST00000346562 ROS1P08922 2347 aa17.21■□□□□ 0.35
NPAS3-201ENST00000346562 LINC00308Q8TCZ7 52 aa17.21■□□□□ 0.35
NPAS3-201ENST00000346562 ZFAND3Q9H8U3 227 aa17.21■□□□□ 0.35
NPAS3-201ENST00000346562 C11orf71Q6IPW1 123 aa17.21■□□□□ 0.35
NPAS3-201ENST00000346562 PTH2Q96A98 100 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 WFDC10BQ8IUB3 73 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 PRR15LQ9BU68 103 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 ZNF702PQ9H963 129 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 G3V4G9 280 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 M0QY20 66 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 BBC3Q96PG8 261 aaPredicted RBP17.2■□□□□ 0.34
NPAS3-201ENST00000346562 XAGE1AQ9HD64 81 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 DHRS4-AS1Q9P1J3 65 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 UBE2D4Q9Y2X8 147 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 DOCK10Q96BY6 2186 aa17.2■□□□□ 0.34
NPAS3-201ENST00000346562 KIF26AQ9ULI4 1882 aaPredicted RBP17.17■□□□□ 0.34
NPAS3-201ENST00000346562 SLPIP03973 132 aa17.17■□□□□ 0.34
NPAS3-201ENST00000346562 DENND4CQ5VZ89 1909 aa17.17■□□□□ 0.34
NPAS3-201ENST00000346562 IGLV2-18A0A075B6J9 118 aa17.17■□□□□ 0.34
NPAS3-201ENST00000346562 C3orf22Q8N5N4 141 aa17.17■□□□□ 0.34
NPAS3-201ENST00000346562 LOC107984640A0A0U1RRK4 108 aa17.16■□□□□ 0.34
NPAS3-201ENST00000346562 WNK2Q9Y3S1 2297 aa17.16■□□□□ 0.34
NPAS3-201ENST00000346562 SCXQ7RTU7 201 aa17.16■□□□□ 0.34
NPAS3-201ENST00000346562 MLST8Q9BVC4 326 aa17.16■□□□□ 0.34
NPAS3-201ENST00000346562 IGLV4-69A0A075B6H9 119 aa17.15■□□□□ 0.34
NPAS3-201ENST00000346562 CD164L2Q6UWJ8 174 aa17.15■□□□□ 0.34
NPAS3-201ENST00000346562 BRK1Q8WUW1 75 aa17.15■□□□□ 0.34
NPAS3-201ENST00000346562 M0R378 163 aa17.15■□□□□ 0.34
NPAS3-201ENST00000346562 SDIM1Q6ZPB5 146 aa17.15■□□□□ 0.34
NPAS3-201ENST00000346562 M0R2N4 97 aa17.15■□□□□ 0.34
NPAS3-201ENST00000346562 KPRPQ5T749 579 aaPredicted RBP17.15■□□□□ 0.34
NPAS3-201ENST00000346562 LELP1Q5T871 98 aa17.15■□□□□ 0.34
NPAS3-201ENST00000346562 LY6G6CO95867 125 aa17.14■□□□□ 0.33
NPAS3-201ENST00000346562 PIK3CD-AS1Q5SR53 167 aa17.14■□□□□ 0.33
NPAS3-201ENST00000346562 NOTCH4Q99466 2003 aa17.14■□□□□ 0.33
NPAS3-201ENST00000346562 GDF5OSQ5U4N7 250 aa17.14■□□□□ 0.33
NPAS3-201ENST00000346562 ENHOQ6UWT2 76 aa17.14■□□□□ 0.33
NPAS3-201ENST00000346562 DCANP1Q8TF63 244 aa17.14■□□□□ 0.33
NPAS3-201ENST00000346562 BRWD1-AS2P59051 145 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 UBE2D3P61077 147 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 PLXNB3Q9ULL4 1909 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 ABCA1O95477 2261 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 C1orf229Q6ZS94 237 aaPredicted RBP17.13■□□□□ 0.33
NPAS3-201ENST00000346562 LINC00474Q9P2X8 69 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 CCKP06307 115 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 GTF3C1Q12789 2109 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 SPTSSBQ8NFR3 76 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 PYGO1Q9Y3Y4 419 aa17.13■□□□□ 0.33
NPAS3-201ENST00000346562 C1orf158Q8N1D5 194 aa17.12■□□□□ 0.33
NPAS3-201ENST00000346562 IGKV2-28A0A075B6P5 120 aa17.12■□□□□ 0.33
NPAS3-201ENST00000346562 TEX49A0A1B0GTD5 131 aa17.12■□□□□ 0.33
NPAS3-201ENST00000346562 IGKV2D-28P01615 120 aa17.12■□□□□ 0.33
NPAS3-201ENST00000346562 C10orf99Q6UWK7 81 aa17.12■□□□□ 0.33
NPAS3-201ENST00000346562 RBX1P62877 108 aa17.11■□□□□ 0.33
NPAS3-201ENST00000346562 C6orf99Q4VX62 202 aa17.11■□□□□ 0.33
NPAS3-201ENST00000346562 EIF4EBP1Q13541 118 aaPredicted RBP17.11■□□□□ 0.33
NPAS3-201ENST00000346562 LINC01006Q8NI28 216 aa17.11■□□□□ 0.33
NPAS3-201ENST00000346562 GPR179Q6PRD1 2367 aa17.11■□□□□ 0.33
NPAS3-201ENST00000346562 C9orf85Q96MD7 179 aa17.11■□□□□ 0.33
NPAS3-201ENST00000346562 Q8N976 141 aa17.1■□□□□ 0.33
NPAS3-201ENST00000346562 NACAE9PAV3 2078 aa17.1■□□□□ 0.33
NPAS3-201ENST00000346562 PROK1P58294 105 aa17.09■□□□□ 0.33
NPAS3-201ENST00000346562 PPDPFQ9H3Y8 114 aa17.09■□□□□ 0.33
NPAS3-201ENST00000346562 FAM236DA0A1B0GTK5 79 aa17.09■□□□□ 0.33
NPAS3-201ENST00000346562 FAM236CP0DP71 79 aa17.09■□□□□ 0.33
NPAS3-201ENST00000346562 U3KQK5 164 aa17.09■□□□□ 0.33
NPAS3-201ENST00000346562 C20orf197Q8N268 126 aa17.09■□□□□ 0.33
NPAS3-201ENST00000346562 SPINK6Q6UWN8 80 aa17.09■□□□□ 0.33
NPAS3-201ENST00000346562 RIF1Q5UIP0 2472 aaKnown RBP17.09■□□□□ 0.33
NPAS3-201ENST00000346562 TRBV30A0A0K0K1B3 111 aa17.08■□□□□ 0.33
NPAS3-201ENST00000346562 C22orf34Q6ZV56 151 aa17.08■□□□□ 0.33
NPAS3-201ENST00000346562 TRBV6-5A0A0K0K1A5 114 aa17.08■□□□□ 0.32
NPAS3-201ENST00000346562 TIMM17BO60830 172 aa17.08■□□□□ 0.32
NPAS3-201ENST00000346562 RNASE8Q8TDE3 154 aaKnown RBP17.07■□□□□ 0.32
NPAS3-201ENST00000346562 MED13Q9UHV7 2174 aa17.07■□□□□ 0.32
NPAS3-201ENST00000346562 HRCT1Q6UXD1 115 aa17.07■□□□□ 0.32
NPAS3-201ENST00000346562 CLUHP3Q96NS8 147 aa17.07■□□□□ 0.32
NPAS3-201ENST00000346562 TRIAP1O43715 76 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms