RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 MPLKIPQ8TAP9 179 aa11.77□□□□□ -0.52
SRPK1-201ENST00000346162 TRBV30A0A0K0K1B3 111 aa11.77□□□□□ -0.53
SRPK1-201ENST00000346162 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.53
SRPK1-201ENST00000346162 A0A0J9YXY3 114 aa11.76□□□□□ -0.53
SRPK1-201ENST00000346162 MED14OSP0DP75 135 aa11.76□□□□□ -0.53
SRPK1-201ENST00000346162 CRIP1P50238 77 aa11.76□□□□□ -0.53
SRPK1-201ENST00000346162 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
SRPK1-201ENST00000346162 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
SRPK1-201ENST00000346162 KLK5Q9Y337 293 aaPredicted RBP11.76□□□□□ -0.53
SRPK1-201ENST00000346162 TLN2Q9Y4G6 2542 aa11.75□□□□□ -0.53
SRPK1-201ENST00000346162 LECT2O14960 151 aa11.75□□□□□ -0.53
SRPK1-201ENST00000346162 FSTL3O95633 263 aa11.75□□□□□ -0.53
SRPK1-201ENST00000346162 DEFB1P60022 68 aa11.75□□□□□ -0.53
SRPK1-201ENST00000346162 MYCNOSP40205 109 aa11.75□□□□□ -0.53
SRPK1-201ENST00000346162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
SRPK1-201ENST00000346162 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
SRPK1-201ENST00000346162 RPL18AQ02543 176 aaKnown RBP11.75□□□□□ -0.53
SRPK1-201ENST00000346162 IGHV3-30P01768 117 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 IGHV3-30-5P0DP03 117 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 SLURP1P55000 103 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 UNQ9165/PRO28630Q6UXU0 137 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 SND1-IT1Q9HBX3 110 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 DPH3Q96FX2 82 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
SRPK1-201ENST00000346162 ARHGAP32A7KAX9 2087 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 LINC01548A6NM66 108 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 TMEM61Q8N0U2 210 aa11.74□□□□□ -0.53
SRPK1-201ENST00000346162 COX7A2LO14548 114 aa11.73□□□□□ -0.53
SRPK1-201ENST00000346162 DAD1P61803 113 aa11.73□□□□□ -0.53
SRPK1-201ENST00000346162 USP17L23D6RBM5 183 aa11.73□□□□□ -0.53
SRPK1-201ENST00000346162 J3QKU1 62 aa11.73□□□□□ -0.53
SRPK1-201ENST00000346162 MIAQ16674 131 aa11.73□□□□□ -0.53
SRPK1-201ENST00000346162 U3KQE9 123 aa11.73□□□□□ -0.53
SRPK1-201ENST00000346162 K7EMT4 169 aa11.73□□□□□ -0.53
SRPK1-201ENST00000346162 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
SRPK1-201ENST00000346162 MRPL55Q7Z7F7 128 aaKnown RBP11.72□□□□□ -0.53
SRPK1-201ENST00000346162 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
SRPK1-201ENST00000346162 RNF185Q96GF1 192 aa11.72□□□□□ -0.53
SRPK1-201ENST00000346162 CCDC140Q96MF4 163 aa11.72□□□□□ -0.53
SRPK1-201ENST00000346162 IGHV1-58A0A0C4DH39 117 aa11.71□□□□□ -0.53
SRPK1-201ENST00000346162 GPHB5Q86YW7 130 aa11.71□□□□□ -0.53
SRPK1-201ENST00000346162 NDUFC2-KCTD14E9PQ53 114 aa11.71□□□□□ -0.53
SRPK1-201ENST00000346162 PRB2P02812 416 aaPredicted RBP11.71□□□□□ -0.53
SRPK1-201ENST00000346162 CCL24O00175 119 aa11.71□□□□□ -0.54
SRPK1-201ENST00000346162 CRIP2P52943 208 aaPredicted RBP11.71□□□□□ -0.54
SRPK1-201ENST00000346162 EML5Q05BV3 1969 aa11.71□□□□□ -0.54
SRPK1-201ENST00000346162 LY6LH3BQJ8 138 aa11.71□□□□□ -0.54
SRPK1-201ENST00000346162 APRG1Q8IVJ8 170 aa11.71□□□□□ -0.54
SRPK1-201ENST00000346162 UBE2D1P51668 147 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 IGHV4OR15-8A0A075B7B6 117 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 A0A087WW49 117 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 FAM240AA0A1B0GVK7 77 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 JMJD7-PLA2G4BH0Y9G9 81 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 UBE2D3P61077 147 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 UBE2D2P62837 147 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 Q6ZS46 218 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 C19orf84I3L1E1 186 aa11.7□□□□□ -0.54
SRPK1-201ENST00000346162 TNRC6BQ9UPQ9 1833 aaKnown RBP11.69□□□□□ -0.54
SRPK1-201ENST00000346162 TRAV25A0A0B4J276 109 aa11.69□□□□□ -0.54
SRPK1-201ENST00000346162 A6NDX4 124 aa11.69□□□□□ -0.54
SRPK1-201ENST00000346162 ZNF22P17026 224 aaPredicted RBP11.69□□□□□ -0.54
SRPK1-201ENST00000346162 VSIG2Q96IQ7 327 aa11.69□□□□□ -0.54
SRPK1-201ENST00000346162 ATG2AQ2TAZ0 1938 aa11.69□□□□□ -0.54
SRPK1-201ENST00000346162 H7C423 109 aa11.68□□□□□ -0.54
SRPK1-201ENST00000346162 IGLV2-11P01706 119 aa11.68□□□□□ -0.54
SRPK1-201ENST00000346162 SPTBN4Q9H254 2564 aa11.68□□□□□ -0.54
SRPK1-201ENST00000346162 GAS8-AS1O95177 125 aa11.68□□□□□ -0.54
SRPK1-201ENST00000346162 EBI3Q14213 229 aa11.68□□□□□ -0.54
SRPK1-201ENST00000346162 A0A096LNJ9 63 aa11.67□□□□□ -0.54
SRPK1-201ENST00000346162 CHD8Q9HCK8 2581 aa11.67□□□□□ -0.54
SRPK1-201ENST00000346162 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
SRPK1-201ENST00000346162 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
SRPK1-201ENST00000346162 NOP10Q9NPE3 64 aaKnown RBP11.67□□□□□ -0.54
SRPK1-201ENST00000346162 LST1O00453 97 aa11.67□□□□□ -0.54
SRPK1-201ENST00000346162 SETD2Q9BYW2 2564 aaPredicted RBP11.66□□□□□ -0.54
SRPK1-201ENST00000346162 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
SRPK1-201ENST00000346162 C11orf71Q6IPW1 123 aa11.65□□□□□ -0.54
SRPK1-201ENST00000346162 TMEM89A2RUT3 159 aa11.65□□□□□ -0.54
SRPK1-201ENST00000346162 TNFRSF13BO14836 293 aaPredicted RBP11.65□□□□□ -0.54
SRPK1-201ENST00000346162 CXCL5P42830 114 aa11.65□□□□□ -0.54
SRPK1-201ENST00000346162 HIST2H2BCQ6DN03 193 aa11.64□□□□□ -0.55
SRPK1-201ENST00000346162 HIST2H2BDQ6DRA6 164 aa11.64□□□□□ -0.55
SRPK1-201ENST00000346162 ENHOQ6UWT2 76 aa11.64□□□□□ -0.55
SRPK1-201ENST00000346162 COX7B2Q8TF08 81 aa11.63□□□□□ -0.55
SRPK1-201ENST00000346162 IGF1P05019 195 aa11.63□□□□□ -0.55
SRPK1-201ENST00000346162 TMEM263Q8WUH6 116 aaKnown RBP11.63□□□□□ -0.55
SRPK1-201ENST00000346162 PRORYQ9H606 182 aa11.63□□□□□ -0.55
SRPK1-201ENST00000346162 ZMAT4Q9H898 229 aa11.63□□□□□ -0.55
SRPK1-201ENST00000346162 TIMM17BO60830 172 aa11.63□□□□□ -0.55
SRPK1-201ENST00000346162 A0A0J9YX75 114 aa11.62□□□□□ -0.55
SRPK1-201ENST00000346162 TMEM223A0PJW6 202 aa11.62□□□□□ -0.55
SRPK1-201ENST00000346162 F8WEM9 126 aa11.62□□□□□ -0.55
SRPK1-201ENST00000346162 C20orf173Q96LM9 149 aa11.62□□□□□ -0.55
SRPK1-201ENST00000346162 SMIM26A0A096LP01 95 aa11.62□□□□□ -0.55
SRPK1-201ENST00000346162 TIRAPP58753 221 aa11.62□□□□□ -0.55
SRPK1-201ENST00000346162 CEMP1Q6PRD7 247 aaPredicted RBP11.62□□□□□ -0.55
SRPK1-201ENST00000346162 CPAMD8Q8IZJ3 1885 aa11.61□□□□□ -0.55
SRPK1-201ENST00000346162 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms