RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 I3L3M4 83 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 UBE2L6O14933 153 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 GAS8-AS1O95177 125 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 RPS10P46783 165 aaKnown RBP10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 GAGE6Q13070 117 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 MRPL51Q4U2R6 128 aaKnown RBP10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 MPV17L2Q567V2 206 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 C10orf91Q5T1B1 145 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 ATRAIDQ6UW56 229 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 BTF3L4Q96K17 158 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 TM2D2Q9BX73 214 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 CARHSP1Q9Y2V2 147 aaKnown RBP10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 SMKR1H3BMG3 65 aa10.34□□□□□ -0.75
TNFRSF12A-202ENST00000341627 EREGO14944 169 aa10.34□□□□□ -0.75
TNFRSF12A-202ENST00000341627 APCSP02743 223 aa10.34□□□□□ -0.75
TNFRSF12A-202ENST00000341627 CKS2P33552 79 aa10.34□□□□□ -0.75
TNFRSF12A-202ENST00000341627 DEFB104AQ8WTQ1 72 aa10.34□□□□□ -0.75
TNFRSF12A-202ENST00000341627 RMI2Q96E14 147 aa10.34□□□□□ -0.75
TNFRSF12A-202ENST00000341627 TMEM70Q9BUB7 260 aa10.34□□□□□ -0.75
TNFRSF12A-202ENST00000341627 CRPP02741 224 aa10.33□□□□□ -0.76
TNFRSF12A-202ENST00000341627 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
TNFRSF12A-202ENST00000341627 RBX1P62877 108 aa10.33□□□□□ -0.76
TNFRSF12A-202ENST00000341627 Q0VG73 95 aa10.33□□□□□ -0.76
TNFRSF12A-202ENST00000341627 Q8N976 141 aa10.33□□□□□ -0.76
TNFRSF12A-202ENST00000341627 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
TNFRSF12A-202ENST00000341627 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
TNFRSF12A-202ENST00000341627 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
TNFRSF12A-202ENST00000341627 VCYO14598 125 aa10.32□□□□□ -0.76
TNFRSF12A-202ENST00000341627 PPBPP02775 128 aa10.32□□□□□ -0.76
TNFRSF12A-202ENST00000341627 POLR2KP53803 58 aaKnown RBP10.32□□□□□ -0.76
TNFRSF12A-202ENST00000341627 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
TNFRSF12A-202ENST00000341627 NDUFA5Q16718 116 aa10.32□□□□□ -0.76
TNFRSF12A-202ENST00000341627 NRACQ8N912 160 aa10.32□□□□□ -0.76
TNFRSF12A-202ENST00000341627 TMEM242Q9NWH2 141 aa10.32□□□□□ -0.76
TNFRSF12A-202ENST00000341627 PCLOQ9Y6V0 5065 aa10.31□□□□□ -0.76
TNFRSF12A-202ENST00000341627 TRAV9-1A0A075B6T8 112 aa10.31□□□□□ -0.76
TNFRSF12A-202ENST00000341627 C7orf77A4D0Y5 90 aa10.31□□□□□ -0.76
TNFRSF12A-202ENST00000341627 D6R8Y8 96 aa10.31□□□□□ -0.76
TNFRSF12A-202ENST00000341627 S100PP25815 95 aa10.31□□□□□ -0.76
TNFRSF12A-202ENST00000341627 RHEBQ15382 184 aa10.31□□□□□ -0.76
TNFRSF12A-202ENST00000341627 CLRN3Q8NCR9 226 aa10.31□□□□□ -0.76
TNFRSF12A-202ENST00000341627 C20orf78Q9BR46 151 aa10.31□□□□□ -0.76
TNFRSF12A-202ENST00000341627 TRBV24-1A0A075B6N3 115 aa10.3□□□□□ -0.76
TNFRSF12A-202ENST00000341627 A0A087WTM6 91 aa10.3□□□□□ -0.76
TNFRSF12A-202ENST00000341627 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
TNFRSF12A-202ENST00000341627 H7C423 109 aa10.3□□□□□ -0.76
TNFRSF12A-202ENST00000341627 IGKV2D-24A0A075B6R9 120 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 PHOX2AO14813 284 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 TNFRSF6BO95407 300 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 TSHBP01222 138 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 APOC3P02656 99 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 FCER1GP30273 86 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 MIAQ16674 131 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 AMMECR1LQ6DCA0 310 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 ORMDL3Q8N138 153 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 KIR2DL4Q99706 377 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 RPS10P5Q9NQ39 176 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 DNAH5Q8TE73 4624 aa10.29□□□□□ -0.76
TNFRSF12A-202ENST00000341627 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
TNFRSF12A-202ENST00000341627 TMEM136Q6ZRR5 245 aa10.28□□□□□ -0.76
TNFRSF12A-202ENST00000341627 SPATA12Q7Z6I5 190 aa10.28□□□□□ -0.76
TNFRSF12A-202ENST00000341627 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
TNFRSF12A-202ENST00000341627 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
TNFRSF12A-202ENST00000341627 HSPG2P98160 4391 aa10.27□□□□□ -0.76
TNFRSF12A-202ENST00000341627 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 IGKV2-29A2NJV5 120 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 TCAPO15273 167 aa10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 SNAPINO95295 136 aa10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 SVBPQ8N300 66 aa10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 PRELID3AQ96N28 172 aa10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 PRR34Q9NV39 138 aa10.27□□□□□ -0.77
TNFRSF12A-202ENST00000341627 IGLV4-60A0A075B6I1 120 aa10.26□□□□□ -0.77
TNFRSF12A-202ENST00000341627 NPYP01303 97 aa10.26□□□□□ -0.77
TNFRSF12A-202ENST00000341627 ESDP10768 282 aa10.26□□□□□ -0.77
TNFRSF12A-202ENST00000341627 REG3AQ06141 175 aa10.26□□□□□ -0.77
TNFRSF12A-202ENST00000341627 RNASEKQ6P5S7 137 aaKnown RBP10.26□□□□□ -0.77
TNFRSF12A-202ENST00000341627 CLPSL2Q6UWE3 100 aa10.26□□□□□ -0.77
TNFRSF12A-202ENST00000341627 LAMTOR2Q9Y2Q5 125 aa10.26□□□□□ -0.77
TNFRSF12A-202ENST00000341627 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
TNFRSF12A-202ENST00000341627 C16orf90A8MZG2 172 aa10.25□□□□□ -0.77
TNFRSF12A-202ENST00000341627 FGF6P10767 208 aa10.25□□□□□ -0.77
TNFRSF12A-202ENST00000341627 ZNF25P17030 456 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF12A-202ENST00000341627 SMIM2Q9BVW6 85 aa10.25□□□□□ -0.77
TNFRSF12A-202ENST00000341627 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
TNFRSF12A-202ENST00000341627 APOBP04114 4563 aaKnown RBP10.24□□□□□ -0.77
TNFRSF12A-202ENST00000341627 KRTAP10-2P60368 255 aa10.24□□□□□ -0.77
TNFRSF12A-202ENST00000341627 SMAGPQ0VAQ4 97 aa10.24□□□□□ -0.77
TNFRSF12A-202ENST00000341627 COX19Q49B96 90 aa10.24□□□□□ -0.77
TNFRSF12A-202ENST00000341627 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
TNFRSF12A-202ENST00000341627 TRAV8-4A0A0B4J246 113 aa10.23□□□□□ -0.77
TNFRSF12A-202ENST00000341627 HLA-DQA1P01909 254 aa10.23□□□□□ -0.77
TNFRSF12A-202ENST00000341627 CDPF1Q6NVV7 123 aa10.23□□□□□ -0.77
TNFRSF12A-202ENST00000341627 TMEM18Q96B42 140 aa10.23□□□□□ -0.77
TNFRSF12A-202ENST00000341627 ABCA13Q86UQ4 5058 aa10.22□□□□□ -0.77
TNFRSF12A-202ENST00000341627 MAPKAPK5-AS1Q8N8E1 139 aa10.22□□□□□ -0.77
TNFRSF12A-202ENST00000341627 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
TNFRSF12A-202ENST00000341627 BAALCQ8WXS3 180 aa10.22□□□□□ -0.77
TNFRSF12A-202ENST00000341627 MAP1LC3AQ9H492 121 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms