RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 SHANK1Q9Y566 2161 aa13.38□□□□□ -0.27
SYDE2-202ENST00000341460 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
SYDE2-202ENST00000341460 CASC2Q6XLA1 102 aa13.37□□□□□ -0.27
SYDE2-202ENST00000341460 ODF3L1Q8IXM7 274 aa13.36□□□□□ -0.27
SYDE2-202ENST00000341460 U3KQK5 164 aa13.35□□□□□ -0.27
SYDE2-202ENST00000341460 RITA1Q96K30 269 aa13.35□□□□□ -0.27
SYDE2-202ENST00000341460 IGLV2-14P01704 120 aa13.35□□□□□ -0.27
SYDE2-202ENST00000341460 ZFAND3Q9H8U3 227 aa13.35□□□□□ -0.27
SYDE2-202ENST00000341460 KLK5Q9Y337 293 aaPredicted RBP13.34□□□□□ -0.27
SYDE2-202ENST00000341460 SPART-AS1P0CW21 52 aa13.34□□□□□ -0.27
SYDE2-202ENST00000341460 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.27
SYDE2-202ENST00000341460 TMEM263Q8WUH6 116 aaKnown RBP13.33□□□□□ -0.28
SYDE2-202ENST00000341460 C5orf56Q8N8D9 126 aa13.33□□□□□ -0.28
SYDE2-202ENST00000341460 Q8N9W7 124 aa13.33□□□□□ -0.28
SYDE2-202ENST00000341460 ESM1Q9NQ30 184 aa13.33□□□□□ -0.28
SYDE2-202ENST00000341460 MALRD1Q5VYJ5 2156 aa13.33□□□□□ -0.28
SYDE2-202ENST00000341460 PCNX1Q96RV3 2341 aa13.33□□□□□ -0.28
SYDE2-202ENST00000341460 ZNF80P51504 273 aaPredicted RBP13.33□□□□□ -0.28
SYDE2-202ENST00000341460 ADORA2A-AS1P86434 159 aa13.33□□□□□ -0.28
SYDE2-202ENST00000341460 CDKN2A-AS1Q9UH64 79 aa13.32□□□□□ -0.28
SYDE2-202ENST00000341460 DAZAP2Q15038 168 aaPredicted RBP13.31□□□□□ -0.28
SYDE2-202ENST00000341460 FAM222AQ5U5X8 452 aa13.31□□□□□ -0.28
SYDE2-202ENST00000341460 DYSFO75923 2080 aa13.31□□□□□ -0.28
SYDE2-202ENST00000341460 DSCAML1Q8TD84 2053 aa13.31□□□□□ -0.28
SYDE2-202ENST00000341460 WFDC10BQ8IUB3 73 aa13.31□□□□□ -0.28
SYDE2-202ENST00000341460 CCKP06307 115 aa13.3□□□□□ -0.28
SYDE2-202ENST00000341460 EBI3Q14213 229 aa13.3□□□□□ -0.28
SYDE2-202ENST00000341460 Q8N976 141 aa13.3□□□□□ -0.28
SYDE2-202ENST00000341460 FRMPD3Q5JV73 1810 aa13.3□□□□□ -0.28
SYDE2-202ENST00000341460 LRCOL1A6NCL2 159 aa13.3□□□□□ -0.28
SYDE2-202ENST00000341460 CCL18P55774 89 aa13.3□□□□□ -0.28
SYDE2-202ENST00000341460 GTF3C1Q12789 2109 aa13.3□□□□□ -0.28
SYDE2-202ENST00000341460 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
SYDE2-202ENST00000341460 PLA2G5P39877 138 aa13.29□□□□□ -0.28
SYDE2-202ENST00000341460 ZGRF1Q86YA3 2104 aa13.29□□□□□ -0.28
SYDE2-202ENST00000341460 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
SYDE2-202ENST00000341460 K7EMT4 169 aa13.29□□□□□ -0.28
SYDE2-202ENST00000341460 P0C879 139 aa13.29□□□□□ -0.28
SYDE2-202ENST00000341460 IBA57-AS1B1ANH7 110 aa13.28□□□□□ -0.28
SYDE2-202ENST00000341460 VPREB1P12018 145 aa13.28□□□□□ -0.28
SYDE2-202ENST00000341460 IGKV1D-37A0A075B6S9 117 aa13.27□□□□□ -0.28
SYDE2-202ENST00000341460 Q8N9L7 120 aa13.27□□□□□ -0.29
SYDE2-202ENST00000341460 ARHGAP21Q5T5U3 1957 aa13.27□□□□□ -0.29
SYDE2-202ENST00000341460 NUP210Q8TEM1 1887 aaPredicted RBP13.27□□□□□ -0.29
SYDE2-202ENST00000341460 ATRXP46100 2492 aa13.26□□□□□ -0.29
SYDE2-202ENST00000341460 C4orf48Q5BLP8 95 aa13.26□□□□□ -0.29
SYDE2-202ENST00000341460 TRBV10-1A0A0K0K1A3 114 aa13.26□□□□□ -0.29
SYDE2-202ENST00000341460 TMEM89A2RUT3 159 aa13.26□□□□□ -0.29
SYDE2-202ENST00000341460 ZNF295-AS1Q8N0V1 137 aa13.26□□□□□ -0.29
SYDE2-202ENST00000341460 HHLA3Q9XRX5 114 aa13.26□□□□□ -0.29
SYDE2-202ENST00000341460 PCNX2A6NKB5 2137 aa13.26□□□□□ -0.29
SYDE2-202ENST00000341460 PRORYQ9H606 182 aa13.26□□□□□ -0.29
SYDE2-202ENST00000341460 A0A087WVE0 104 aa13.25□□□□□ -0.29
SYDE2-202ENST00000341460 IGLV1-47P01700 117 aa13.25□□□□□ -0.29
SYDE2-202ENST00000341460 GPHB5Q86YW7 130 aa13.25□□□□□ -0.29
SYDE2-202ENST00000341460 ZFP36P26651 326 aaKnown RBP13.25□□□□□ -0.29
SYDE2-202ENST00000341460 RNF185Q96GF1 192 aa13.25□□□□□ -0.29
SYDE2-202ENST00000341460 MYCNOSP40205 109 aa13.24□□□□□ -0.29
SYDE2-202ENST00000341460 LINC00310P59036 64 aa13.24□□□□□ -0.29
SYDE2-202ENST00000341460 Q8N7P7 452 aa13.24□□□□□ -0.29
SYDE2-202ENST00000341460 E7EUB6 86 aa13.24□□□□□ -0.29
SYDE2-202ENST00000341460 PSPHP1O15172 72 aa13.24□□□□□ -0.29
SYDE2-202ENST00000341460 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
SYDE2-202ENST00000341460 C6orf99Q4VX62 202 aa13.23□□□□□ -0.29
SYDE2-202ENST00000341460 ZFAND2AQ8N6M9 145 aa13.23□□□□□ -0.29
SYDE2-202ENST00000341460 KLK12Q9UKR0 248 aa13.23□□□□□ -0.29
SYDE2-202ENST00000341460 MED13LQ71F56 2210 aa13.23□□□□□ -0.29
SYDE2-202ENST00000341460 C3orf84H3BNL1 204 aa13.23□□□□□ -0.29
SYDE2-202ENST00000341460 Q6ZS46 218 aa13.23□□□□□ -0.29
SYDE2-202ENST00000341460 DEFB1P60022 68 aa13.22□□□□□ -0.29
SYDE2-202ENST00000341460 A0A0J9YWU9 116 aa13.22□□□□□ -0.29
SYDE2-202ENST00000341460 PRYO14603 147 aa13.22□□□□□ -0.29
SYDE2-202ENST00000341460 C4orf3Q8WVX3 66 aa13.22□□□□□ -0.29
SYDE2-202ENST00000341460 PLXNB3Q9ULL4 1909 aa13.21□□□□□ -0.29
SYDE2-202ENST00000341460 C1orf158Q8N1D5 194 aa13.21□□□□□ -0.29
SYDE2-202ENST00000341460 WFDC10AQ9H1F0 79 aa13.21□□□□□ -0.29
SYDE2-202ENST00000341460 FAM30AQ9NZY2 134 aa13.21□□□□□ -0.29
SYDE2-202ENST00000341460 LINC00467Q9BRT7 94 aa13.2□□□□□ -0.3
SYDE2-202ENST00000341460 SIRPDQ9H106 197 aa13.2□□□□□ -0.3
SYDE2-202ENST00000341460 UBE2D3P61077 147 aa13.2□□□□□ -0.3
SYDE2-202ENST00000341460 UBE2D2P62837 147 aa13.2□□□□□ -0.3
SYDE2-202ENST00000341460 FBXL19-AS1Q494R0 122 aa13.2□□□□□ -0.3
SYDE2-202ENST00000341460 WFDC13Q8IUB5 93 aa13.2□□□□□ -0.3
SYDE2-202ENST00000341460 A0A1W2PNU3 283 aaPredicted RBP13.19□□□□□ -0.3
SYDE2-202ENST00000341460 TRBV6-5A0A0K0K1A5 114 aa13.19□□□□□ -0.3
SYDE2-202ENST00000341460 A8MZ25 164 aa13.19□□□□□ -0.3
SYDE2-202ENST00000341460 F8W735 103 aaPredicted RBP13.19□□□□□ -0.3
SYDE2-202ENST00000341460 B9D2Q9BPU9 175 aa13.19□□□□□ -0.3
SYDE2-202ENST00000341460 SERTAD4-AS1Q5TG53 156 aa13.18□□□□□ -0.3
SYDE2-202ENST00000341460 TRBV7-6A0A0J9YX20 115 aa13.18□□□□□ -0.3
SYDE2-202ENST00000341460 CDIP1Q9H305 208 aa13.18□□□□□ -0.3
SYDE2-202ENST00000341460 C22orf34Q6ZV56 151 aa13.18□□□□□ -0.3
SYDE2-202ENST00000341460 MED13Q9UHV7 2174 aa13.17□□□□□ -0.3
SYDE2-202ENST00000341460 CRIP2P52943 208 aaPredicted RBP13.17□□□□□ -0.3
SYDE2-202ENST00000341460 C9orf85Q96MD7 179 aa13.17□□□□□ -0.3
SYDE2-202ENST00000341460 UBE2D1P51668 147 aa13.17□□□□□ -0.3
SYDE2-202ENST00000341460 Q6ZQY7 126 aa13.17□□□□□ -0.3
SYDE2-202ENST00000341460 HIGD2AQ9BW72 106 aa13.17□□□□□ -0.3
SYDE2-202ENST00000341460 A0A0J9YX75 114 aa13.17□□□□□ -0.3
SYDE2-202ENST00000341460 CRIP1P50238 77 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms