RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 GGACTQ9BVM4 153 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 GAGE2DQ9UEU5 116 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 TPRKBQ9Y3C4 175 aa5.73□□□□□ -1.49
ATXN3-201ENST00000340660 SMIM8Q96KF7 97 aa5.72□□□□□ -1.49
ATXN3-201ENST00000340660 LYRM2Q9NU23 88 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-201ENST00000340660 GNG5P63218 68 aa5.71□□□□□ -1.5
ATXN3-201ENST00000340660 CTF1Q16619 201 aa5.71□□□□□ -1.5
ATXN3-201ENST00000340660 DNLZQ5SXM8 178 aa5.71□□□□□ -1.5
ATXN3-201ENST00000340660 KRTAP13-1Q8IUC0 172 aa5.71□□□□□ -1.5
ATXN3-201ENST00000340660 CLVS1Q8IUQ0 354 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-201ENST00000340660 Q8N377 158 aa5.71□□□□□ -1.5
ATXN3-201ENST00000340660 NDFIP1Q9BT67 221 aa5.71□□□□□ -1.5
ATXN3-201ENST00000340660 TSC22D2O75157 780 aa5.7□□□□□ -1.5
ATXN3-201ENST00000340660 TLX1NBP0CAT3 122 aa5.7□□□□□ -1.5
ATXN3-201ENST00000340660 TMEM229BQ8NBD8 167 aa5.7□□□□□ -1.5
ATXN3-201ENST00000340660 ZNF471Q9BX82 626 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-201ENST00000340660 S100A14Q9HCY8 104 aa5.7□□□□□ -1.5
ATXN3-201ENST00000340660 MTFP1Q9UDX5 166 aa5.7□□□□□ -1.5
ATXN3-201ENST00000340660 WDR83OSQ9Y284 106 aa5.7□□□□□ -1.5
ATXN3-201ENST00000340660 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 LINC00959A0A1B0GUT2 108 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 GRIFINA4D1Z8 144 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 SMUG1Q53HV7 270 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 PRNTQ86SH4 94 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 ZFP82Q8N141 532 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 CMTM2Q8TAZ6 248 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 SMDT1Q9H4I9 107 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 OTORQ9NRC9 128 aa5.69□□□□□ -1.5
ATXN3-201ENST00000340660 M0R036 132 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 SPINK1P00995 79 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 ANXA3P12429 323 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 SPRR2EP22531 72 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 SPRR2BP35325 72 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 SPRR2AP35326 72 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 C9orf129Q5T035 196 aaKnown RBP5.68□□□□□ -1.5
ATXN3-201ENST00000340660 CD164L2Q6UWJ8 174 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 FAM19A2Q8N3H0 131 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 Q8NBF4 154 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 IMMP2LQ96T52 175 aa5.68□□□□□ -1.5
ATXN3-201ENST00000340660 MRPL35Q9NZE8 188 aaKnown RBP5.68□□□□□ -1.5
ATXN3-201ENST00000340660 B4DEV8 164 aa5.67□□□□□ -1.5
ATXN3-201ENST00000340660 OR7C2O60412 319 aa5.67□□□□□ -1.5
ATXN3-201ENST00000340660 TPT1P13693 172 aaKnown RBP5.67□□□□□ -1.5
ATXN3-201ENST00000340660 UBE2L3P68036 154 aaKnown RBP5.67□□□□□ -1.5
ATXN3-201ENST00000340660 PACRGLQ8N7B6 248 aa5.67□□□□□ -1.5
ATXN3-201ENST00000340660 C11orf1Q9H5F2 150 aa5.67□□□□□ -1.5
ATXN3-201ENST00000340660 SMIM31A0A1B0GVY4 71 aa5.66□□□□□ -1.5
ATXN3-201ENST00000340660 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
ATXN3-201ENST00000340660 RPL12P30050 165 aaKnown RBP5.66□□□□□ -1.5
ATXN3-201ENST00000340660 KRBOX1C9JBD0 128 aa5.65□□□□□ -1.5
ATXN3-201ENST00000340660 PCP4P48539 62 aa5.65□□□□□ -1.5
ATXN3-201ENST00000340660 C22orf24Q9Y442 160 aa5.65□□□□□ -1.5
ATXN3-201ENST00000340660 PIGBOS1A0A0B4J2F0 54 aa5.64□□□□□ -1.51
ATXN3-201ENST00000340660 UBE2L5PA0A1B0GUS4 154 aa5.64□□□□□ -1.51
ATXN3-201ENST00000340660 DISC1C4P0D8 188 aa5.64□□□□□ -1.51
ATXN3-201ENST00000340660 CTRLP40313 264 aa5.64□□□□□ -1.51
ATXN3-201ENST00000340660 BAXQ07812 192 aa5.64□□□□□ -1.51
ATXN3-201ENST00000340660 SPANXN2Q5MJ10 180 aa5.64□□□□□ -1.51
ATXN3-201ENST00000340660 RSL24D1Q9UHA3 163 aaKnown RBP5.64□□□□□ -1.51
ATXN3-201ENST00000340660 APOA1P02647 267 aa5.63□□□□□ -1.51
ATXN3-201ENST00000340660 TGFBR1P36897 503 aa5.63□□□□□ -1.51
ATXN3-201ENST00000340660 TMBIM6P55061 237 aa5.63□□□□□ -1.51
ATXN3-201ENST00000340660 SPAG11BQ08648 103 aa5.63□□□□□ -1.51
ATXN3-201ENST00000340660 AMMECR1LQ6DCA0 310 aa5.63□□□□□ -1.51
ATXN3-201ENST00000340660 RNASEKQ6P5S7 137 aaKnown RBP5.63□□□□□ -1.51
ATXN3-201ENST00000340660 UQCC1Q9NVA1 299 aa5.63□□□□□ -1.51
ATXN3-201ENST00000340660 C6orf48Q9UBA6 75 aa5.63□□□□□ -1.51
ATXN3-201ENST00000340660 M0QY20 66 aa5.62□□□□□ -1.51
ATXN3-201ENST00000340660 NKX2-5P52952 324 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-201ENST00000340660 IAH1Q2TAA2 248 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-201ENST00000340660 LCE1FQ5T754 118 aa5.62□□□□□ -1.51
ATXN3-201ENST00000340660 TMEM18Q96B42 140 aa5.62□□□□□ -1.51
ATXN3-201ENST00000340660 FABP5P3A8MUU1 101 aa5.61□□□□□ -1.51
ATXN3-201ENST00000340660 G3V3Q6 166 aa5.61□□□□□ -1.51
ATXN3-201ENST00000340660 COX7A2LO14548 114 aa5.61□□□□□ -1.51
ATXN3-201ENST00000340660 UBE2AP49459 152 aa5.61□□□□□ -1.51
ATXN3-201ENST00000340660 TAS2R30P59541 319 aa5.61□□□□□ -1.51
ATXN3-201ENST00000340660 FAM74A1Q5RGS3 127 aa5.61□□□□□ -1.51
ATXN3-201ENST00000340660 EXTL2Q9UBQ6 330 aa5.61□□□□□ -1.51
ATXN3-201ENST00000340660 IGLV5-37A0A075B6J1 123 aa5.6□□□□□ -1.51
ATXN3-201ENST00000340660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-201ENST00000340660 TRAV34A0A0B4J273 112 aa5.6□□□□□ -1.51
ATXN3-201ENST00000340660 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-201ENST00000340660 SLC25A20O43772 301 aa5.6□□□□□ -1.51
ATXN3-201ENST00000340660 NTF3P20783 257 aa5.6□□□□□ -1.51
ATXN3-201ENST00000340660 PRRT1Q99946 306 aa5.6□□□□□ -1.51
ATXN3-201ENST00000340660 TMSB15BA0A087X1C1 80 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 C7orf66A4D0T2 115 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 CRIP1P50238 77 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 FLI1Q01543 452 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-201ENST00000340660 COTL1Q14019 142 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 LBHQ53QV2 105 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-201ENST00000340660 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 UNQ6190/PRO20217Q6UXQ8 127 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 SMIM29Q86T20 159 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 TMEM252Q8N6L7 170 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 OR10AG1Q8NH19 301 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 NPCDR1Q9BY65 106 aa5.59□□□□□ -1.51
ATXN3-201ENST00000340660 MBD2Q9UBB5 411 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms