RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PRSS1P07477 247 aa14.96□□□□□ -0.01
VRK2-201ENST00000340157 ERASQ7Z444 233 aa14.96□□□□□ -0.01
VRK2-201ENST00000340157 ZMAT4Q9H898 229 aa14.96□□□□□ -0.01
VRK2-201ENST00000340157 TRAV9-2A0A087WT02 112 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 UBE2D3P61077 147 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 UBE2D2P62837 147 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 GAGE12JA6NER3 117 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 G0S2P27469 103 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 RPL36AP83881 106 aaKnown RBP14.95□□□□□ -0.02
VRK2-201ENST00000340157 GAGE1Q13065 139 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 GAGE4Q13068 117 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 GAGE5Q13069 117 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 GAGE13Q4V321 117 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 RPL36ALQ969Q0 106 aaKnown RBP14.95□□□□□ -0.02
VRK2-201ENST00000340157 CHCHD7Q9BUK0 85 aa14.95□□□□□ -0.02
VRK2-201ENST00000340157 hDV102S1A0JD36 115 aa14.94□□□□□ -0.02
VRK2-201ENST00000340157 SPATA45Q537H7 98 aa14.94□□□□□ -0.02
VRK2-201ENST00000340157 TENM3Q9P273 2699 aa14.94□□□□□ -0.02
VRK2-201ENST00000340157 KPRPQ5T749 579 aaPredicted RBP14.93□□□□□ -0.02
VRK2-201ENST00000340157 BAALCQ8WXS3 180 aa14.93□□□□□ -0.02
VRK2-201ENST00000340157 TSTD3H0UI37 97 aa14.92□□□□□ -0.02
VRK2-201ENST00000340157 Q6ZN92 141 aa14.92□□□□□ -0.02
VRK2-201ENST00000340157 TIMM17AQ99595 171 aa14.92□□□□□ -0.02
VRK2-201ENST00000340157 LINC01549A6NIU2 74 aa14.91□□□□□ -0.02
VRK2-201ENST00000340157 K7EIL1 84 aa14.91□□□□□ -0.02
VRK2-201ENST00000340157 LINC00694P0DN24 101 aa14.91□□□□□ -0.02
VRK2-201ENST00000340157 COTL1Q14019 142 aa14.91□□□□□ -0.02
VRK2-201ENST00000340157 A0A087WX48 190 aa14.91□□□□□ -0.02
VRK2-201ENST00000340157 TRAV12-1A0A0B4J245 112 aa14.91□□□□□ -0.02
VRK2-201ENST00000340157 LURAP1LQ8IV03 231 aa14.91□□□□□ -0.02
VRK2-201ENST00000340157 HHLA3Q9XRX5 114 aa14.91□□□□□ -0.02
VRK2-201ENST00000340157 ZC2HC1BQ5TFG8 222 aa14.9□□□□□ -0.02
VRK2-201ENST00000340157 NTM-AS1Q6ZSK4 140 aa14.9□□□□□ -0.02
VRK2-201ENST00000340157 DAZ4Q86SG3 579 aaKnown RBP14.9□□□□□ -0.02
VRK2-201ENST00000340157 FAM104AQ969W3 186 aa14.9□□□□□ -0.02
VRK2-201ENST00000340157 DAZ3Q9NR90 486 aaKnown RBP14.9□□□□□ -0.02
VRK2-201ENST00000340157 MRPL35Q9NZE8 188 aaKnown RBP14.9□□□□□ -0.02
VRK2-201ENST00000340157 DAD1P61803 113 aa14.89□□□□□ -0.03
VRK2-201ENST00000340157 OPRPNQ99935 248 aaPredicted RBP14.89□□□□□ -0.03
VRK2-201ENST00000340157 CRYBA4P53673 196 aa14.89□□□□□ -0.03
VRK2-201ENST00000340157 TMEM141Q96I45 108 aa14.89□□□□□ -0.03
VRK2-201ENST00000340157 LINC00587B1AMM8 73 aa14.88□□□□□ -0.03
VRK2-201ENST00000340157 SPART-AS1P0CW21 52 aa14.88□□□□□ -0.03
VRK2-201ENST00000340157 SBSPONQ8IVN8 264 aa14.88□□□□□ -0.03
VRK2-201ENST00000340157 PRADC1Q9BSG0 188 aa14.88□□□□□ -0.03
VRK2-201ENST00000340157 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.87□□□□□ -0.03
VRK2-201ENST00000340157 IGKV2-29A2NJV5 120 aaPredicted RBP14.87□□□□□ -0.03
VRK2-201ENST00000340157 PRSS29PA6NIE9 313 aa14.87□□□□□ -0.03
VRK2-201ENST00000340157 DDTP30046 118 aa14.86□□□□□ -0.03
VRK2-201ENST00000340157 CEMP1Q6PRD7 247 aaPredicted RBP14.86□□□□□ -0.03
VRK2-201ENST00000340157 PRO0255Q9UI72 69 aa14.86□□□□□ -0.03
VRK2-201ENST00000340157 IGLC3P0DOY3 106 aa14.85□□□□□ -0.03
VRK2-201ENST00000340157 STPG4Q8N801 248 aa14.85□□□□□ -0.03
VRK2-201ENST00000340157 UBE2D4Q9Y2X8 147 aa14.85□□□□□ -0.03
VRK2-201ENST00000340157 PYGO1Q9Y3Y4 419 aa14.85□□□□□ -0.03
VRK2-201ENST00000340157 IGLV4-3A0A075B6K6 122 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 F8VRH5 84 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 DPM2O94777 84 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 IGKCP01834 107 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 CST9LQ9H4G1 147 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 CHTOPQ9Y3Y2 248 aaKnown RBP14.84□□□□□ -0.03
VRK2-201ENST00000340157 GYPEP15421 78 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 PMVKQ15126 192 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 ANKRD39Q53RE8 183 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 VSIG2Q96IQ7 327 aa14.84□□□□□ -0.03
VRK2-201ENST00000340157 HSBP1L1C9JCN9 74 aa14.82□□□□□ -0.04
VRK2-201ENST00000340157 ATP5G1P05496 136 aa14.82□□□□□ -0.04
VRK2-201ENST00000340157 C12orf74Q32Q52 190 aa14.82□□□□□ -0.04
VRK2-201ENST00000340157 C14orf144Q96I85 54 aa14.82□□□□□ -0.04
VRK2-201ENST00000340157 GTSF1LQ9H1H1 148 aa14.82□□□□□ -0.04
VRK2-201ENST00000340157 C11orf68Q9H3H3 251 aaKnown RBP14.82□□□□□ -0.04
VRK2-201ENST00000340157 IGLV4-69A0A075B6H9 119 aa14.82□□□□□ -0.04
VRK2-201ENST00000340157 TP73-AS1Q9UF72 201 aa14.82□□□□□ -0.04
VRK2-201ENST00000340157 MIEN1Q9BRT3 115 aa14.81□□□□□ -0.04
VRK2-201ENST00000340157 PAX4O43316 350 aa14.8□□□□□ -0.04
VRK2-201ENST00000340157 SPANXA1Q9NS26 97 aa14.8□□□□□ -0.04
VRK2-201ENST00000340157 A0A0J9YY99 117 aa14.8□□□□□ -0.04
VRK2-201ENST00000340157 PLNP26678 52 aa14.8□□□□□ -0.04
VRK2-201ENST00000340157 TCTAP57738 103 aa14.8□□□□□ -0.04
VRK2-201ENST00000340157 TEX48A0A1B0GUV7 120 aa14.79□□□□□ -0.04
VRK2-201ENST00000340157 AMELXQ99217 191 aa14.79□□□□□ -0.04
VRK2-201ENST00000340157 TM2D3Q9BRN9 247 aa14.79□□□□□ -0.04
VRK2-201ENST00000340157 HUWE1Q7Z6Z7 4374 aaKnown RBP14.78□□□□□ -0.04
VRK2-201ENST00000340157 RNASE13Q5GAN3 156 aaKnown RBP14.78□□□□□ -0.04
VRK2-201ENST00000340157 DEFB121Q5J5C9 76 aa14.78□□□□□ -0.04
VRK2-201ENST00000340157 TRAV26-1A0A087WT03 109 aa14.78□□□□□ -0.04
VRK2-201ENST00000340157 A0A0J9YWU9 116 aa14.78□□□□□ -0.04
VRK2-201ENST00000340157 F5H768 121 aa14.78□□□□□ -0.04
VRK2-201ENST00000340157 HTN3P15516 51 aa14.78□□□□□ -0.04
VRK2-201ENST00000340157 Q6ZUT4 128 aa14.78□□□□□ -0.04
VRK2-201ENST00000340157 NPSP0C0P6 89 aa14.77□□□□□ -0.05
VRK2-201ENST00000340157 MRAPQ8TCY5 172 aa14.77□□□□□ -0.05
VRK2-201ENST00000340157 TIMM21Q9BVV7 248 aa14.77□□□□□ -0.05
VRK2-201ENST00000340157 UQCR10Q9UDW1 63 aa14.77□□□□□ -0.05
VRK2-201ENST00000340157 DNHD1Q96M86 4753 aa14.77□□□□□ -0.05
VRK2-201ENST00000340157 C11orf86A6NJI1 115 aa14.76□□□□□ -0.05
VRK2-201ENST00000340157 ATP6V0E2Q8NHE4 81 aa14.76□□□□□ -0.05
VRK2-201ENST00000340157 VCX2Q9H322 139 aa14.76□□□□□ -0.05
VRK2-201ENST00000340157 IGKV2D-26A0A0A0MRZ7 120 aa14.76□□□□□ -0.05
VRK2-201ENST00000340157 TRBV6-8A0A0A6YYG3 113 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms