RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 F5H768 121 aa4.17□□□□□ -1.74
CSDE1-202ENST00000339438 DLX6P56179 175 aa4.17□□□□□ -1.74
CSDE1-202ENST00000339438 TMEM170BQ5T4T1 132 aa4.17□□□□□ -1.74
CSDE1-202ENST00000339438 C2orf66Q6UXQ4 117 aa4.17□□□□□ -1.74
CSDE1-202ENST00000339438 MUSTN1Q8IVN3 82 aa4.17□□□□□ -1.74
CSDE1-202ENST00000339438 FAM19A4Q96LR4 140 aa4.17□□□□□ -1.74
CSDE1-202ENST00000339438 EPM2AB3EWF7 344 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 PMVKQ15126 192 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 IGFL4Q6B9Z1 124 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 RPL39LQ96EH5 51 aaKnown RBP4.16□□□□□ -1.74
CSDE1-202ENST00000339438 KLK15Q9H2R5 256 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 EPPK1P58107 5090 aaKnown RBP4.16□□□□□ -1.74
CSDE1-202ENST00000339438 ENSAO43768 121 aaKnown RBP4.16□□□□□ -1.74
CSDE1-202ENST00000339438 ORMDL2Q53FV1 153 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 LST1O00453 97 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 SPRY2O43597 315 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 IGHV4-39P01824 125 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 SUMO2P61956 95 aaKnown RBP4.16□□□□□ -1.74
CSDE1-202ENST00000339438 BEAN1Q3B7T3 259 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 PIMREGQ9BSJ6 248 aa4.16□□□□□ -1.74
CSDE1-202ENST00000339438 LY6LH3BQJ8 138 aa4.15□□□□□ -1.74
CSDE1-202ENST00000339438 ORM1P02763 201 aa4.15□□□□□ -1.74
CSDE1-202ENST00000339438 ATP5G1P05496 136 aa4.15□□□□□ -1.74
CSDE1-202ENST00000339438 ZNF876PQ49A33 203 aa4.15□□□□□ -1.74
CSDE1-202ENST00000339438 TMEM200BQ69YZ2 307 aa4.15□□□□□ -1.74
CSDE1-202ENST00000339438 C2orf82Q6UX34 121 aa4.15□□□□□ -1.74
CSDE1-202ENST00000339438 Q6ZSV7 163 aa4.15□□□□□ -1.74
CSDE1-202ENST00000339438 MUC4Q99102 2169 aa4.15□□□□□ -1.74
CSDE1-202ENST00000339438 A0A0J9YX75 114 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 CXCL5P42830 114 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 EMP1P54849 157 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 DYNC1H1Q14204 4646 aaKnown RBP4.15□□□□□ -1.75
CSDE1-202ENST00000339438 TRBV7-1A0A0A6YYK4 115 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 RPL27AP46776 148 aaKnown RBP4.15□□□□□ -1.75
CSDE1-202ENST00000339438 UBE2E1P51965 193 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 LINC00315P59091 139 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 C9orf139Q6ZV77 190 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 CCL19Q99731 98 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 BPESC1Q9GZL8 116 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 ZNF580Q9UK33 172 aa4.15□□□□□ -1.75
CSDE1-202ENST00000339438 FLNAP21333 2647 aaKnown RBP4.14□□□□□ -1.75
CSDE1-202ENST00000339438 JMJD1CQ15652 2540 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 J3QQQ9 107 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 PLGLAQ15195 96 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 FAM104AQ969W3 186 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 EEF1AKMT3Q96AZ1 226 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 OR13C6PQ8NH95 151 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 CLEC2BQ92478 149 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 SLC50A1Q9BRV3 221 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 SPANXDQ9BXN6 97 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 ZFAND3Q9H8U3 227 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 ICOSQ9Y6W8 199 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 hADV29S1A0JD25 119 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 ADAMTSL4-AS1Q5T5F5 129 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 PRR9Q5T870 116 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 MRAPQ8TCY5 172 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 BEX4Q9NWD9 120 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-202ENST00000339438 SPANXCQ9NY87 97 aa4.14□□□□□ -1.75
CSDE1-202ENST00000339438 F8WDY8 70 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 VMA21Q3ZAQ7 101 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 HRCT1Q6UXD1 115 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 KIF25-AS1Q9Y6Z4 181 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 ACYP1P07311 99 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 MFAP4P55083 255 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 C9orf47Q6ZRZ4 202 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 LY6G5BQ8NDX9 201 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 TRAV41A0A0B4J266 112 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 IGHV1-69DA0A0B4J2H0 117 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 SDHAF1A6NFY7 115 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 H7C2G1 150 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 FANCD2OSQ96PS1 177 aa4.13□□□□□ -1.75
CSDE1-202ENST00000339438 A0A0J9YXY3 114 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 I3L3M4 83 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 M0R381 172 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 LEPROTO15243 131 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 POLR2KP53803 58 aaKnown RBP4.12□□□□□ -1.75
CSDE1-202ENST00000339438 RPL39P62891 51 aaKnown RBP4.12□□□□□ -1.75
CSDE1-202ENST00000339438 KLK9Q2XQG4 91 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 KLK9Q9UKQ9 250 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 PYGO1Q9Y3Y4 419 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 TMEM258P61165 79 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 GAGE2AQ6NT46 116 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 DUX5Q96PT3 197 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 DSCR8Q96T75 97 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 TIMM21Q9BVV7 248 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-202ENST00000339438 AVPP01185 164 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 IGLV1-47P01700 117 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 HERVK_113P61574 105 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 LMO4P61968 165 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 RNF182Q8N6D2 247 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 TIMM17AQ99595 171 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 DPH3P1Q9H4G8 78 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 C16orf95Q9H693 158 aa4.12□□□□□ -1.75
CSDE1-202ENST00000339438 PAPPA-AS1Q5QFB9 102 aa4.11□□□□□ -1.75
CSDE1-202ENST00000339438 PEMTQ9UBM1 199 aa4.11□□□□□ -1.75
CSDE1-202ENST00000339438 IGLV11-55A0A075B6I3 123 aa4.11□□□□□ -1.75
CSDE1-202ENST00000339438 IGHV4OR15-8A0A075B7B6 117 aa4.11□□□□□ -1.75
CSDE1-202ENST00000339438 A0A087WW49 117 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms