RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
TSSC4-201ENST00000333256 Q8N3U1 123 aa12.78□□□□□ -0.36
TSSC4-201ENST00000333256 PRSS3P2Q8NHM4 247 aa12.78□□□□□ -0.36
TSSC4-201ENST00000333256 CHCHD5Q9BSY4 110 aa12.78□□□□□ -0.36
TSSC4-201ENST00000333256 TRAV8-6A0A0B4J262 113 aa12.77□□□□□ -0.36
TSSC4-201ENST00000333256 TMEM97Q5BJF2 176 aa12.77□□□□□ -0.36
TSSC4-201ENST00000333256 Q8N8P6 123 aa12.77□□□□□ -0.36
TSSC4-201ENST00000333256 UPK3BQ9BT76 320 aa12.77□□□□□ -0.37
TSSC4-201ENST00000333256 TMEM243Q9BU79 118 aa12.77□□□□□ -0.37
TSSC4-201ENST00000333256 CHCHD7Q9BUK0 85 aa12.77□□□□□ -0.37
TSSC4-201ENST00000333256 NXT2Q9NPJ8 142 aaKnown RBP12.77□□□□□ -0.37
TSSC4-201ENST00000333256 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.76□□□□□ -0.37
TSSC4-201ENST00000333256 IGKV2-29A2NJV5 120 aaPredicted RBP12.76□□□□□ -0.37
TSSC4-201ENST00000333256 GAGE6Q13070 117 aa12.76□□□□□ -0.37
TSSC4-201ENST00000333256 Q9H8V8 135 aa12.76□□□□□ -0.37
TSSC4-201ENST00000333256 DNAH1Q9P2D7 4330 aa12.75□□□□□ -0.37
TSSC4-201ENST00000333256 VPS13DQ5THJ4 4388 aa12.74□□□□□ -0.37
TSSC4-201ENST00000333256 TMEM262E9PQX1 116 aa12.74□□□□□ -0.37
TSSC4-201ENST00000333256 SIVA1O15304 175 aa12.74□□□□□ -0.37
TSSC4-201ENST00000333256 IGHV3-30P01768 117 aa12.73□□□□□ -0.37
TSSC4-201ENST00000333256 IGHV3-33P01772 117 aa12.73□□□□□ -0.37
TSSC4-201ENST00000333256 IGHV3-30-3P0DP02 117 aa12.73□□□□□ -0.37
TSSC4-201ENST00000333256 IGHV3-30-5P0DP03 117 aa12.73□□□□□ -0.37
TSSC4-201ENST00000333256 ESDP10768 282 aa12.73□□□□□ -0.37
TSSC4-201ENST00000333256 NIT1Q86X76 327 aa12.73□□□□□ -0.37
TSSC4-201ENST00000333256 URB1-AS1Q96HZ7 61 aa12.73□□□□□ -0.37
TSSC4-201ENST00000333256 FA2HQ7L5A8 372 aa12.73□□□□□ -0.37
TSSC4-201ENST00000333256 ALMS1Q8TCU4 4167 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 UBE2L6O14933 153 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BKO60814 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BJP06899 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BOP23527 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BBP33778 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BDP58876 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BCP62807 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST2H2BEQ16778 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 MPV17L2Q567V2 206 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BHQ93079 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BNQ99877 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 HIST1H2BMQ99879 126 aa12.72□□□□□ -0.37
TSSC4-201ENST00000333256 RPL39P62891 51 aaKnown RBP12.71□□□□□ -0.37
TSSC4-201ENST00000333256 LAGE3Q14657 143 aa12.71□□□□□ -0.37
TSSC4-201ENST00000333256 RNASEKQ6P5S7 137 aaKnown RBP12.71□□□□□ -0.37
TSSC4-201ENST00000333256 Q8N976 141 aa12.71□□□□□ -0.37
TSSC4-201ENST00000333256 A0A087WX48 190 aa12.7□□□□□ -0.38
TSSC4-201ENST00000333256 BAGE3Q86Y29 109 aa12.7□□□□□ -0.38
TSSC4-201ENST00000333256 LINC00614P0C842 121 aa12.7□□□□□ -0.38
TSSC4-201ENST00000333256 DNAH10OSP0CZ25 163 aa12.7□□□□□ -0.38
TSSC4-201ENST00000333256 C20orf203Q8NBC4 194 aa12.7□□□□□ -0.38
TSSC4-201ENST00000333256 KMT2CQ8NEZ4 4911 aaKnown RBP12.69□□□□□ -0.38
TSSC4-201ENST00000333256 LCE6AA0A183 80 aa12.69□□□□□ -0.38
TSSC4-201ENST00000333256 C1orf196B1AJZ1 125 aa12.69□□□□□ -0.38
TSSC4-201ENST00000333256 Q0VG73 95 aa12.69□□□□□ -0.38
TSSC4-201ENST00000333256 ORMDL2Q53FV1 153 aa12.69□□□□□ -0.38
TSSC4-201ENST00000333256 AP5S1Q9NUS5 200 aa12.69□□□□□ -0.38
TSSC4-201ENST00000333256 M0R2N4 97 aa12.68□□□□□ -0.38
TSSC4-201ENST00000333256 FGF6P10767 208 aa12.68□□□□□ -0.38
TSSC4-201ENST00000333256 BTF3P20290 206 aaKnown RBP12.68□□□□□ -0.38
TSSC4-201ENST00000333256 RBX1P62877 108 aa12.68□□□□□ -0.38
TSSC4-201ENST00000333256 PMCHL1Q16048 86 aa12.68□□□□□ -0.38
TSSC4-201ENST00000333256 LINC01556Q5JQF7 62 aa12.68□□□□□ -0.38
TSSC4-201ENST00000333256 HYDINQ4G0P3 5121 aa12.67□□□□□ -0.38
TSSC4-201ENST00000333256 IGLV4-60A0A075B6I1 120 aa12.67□□□□□ -0.38
TSSC4-201ENST00000333256 LINC01546A6NGU7 62 aa12.67□□□□□ -0.38
TSSC4-201ENST00000333256 K7EMI3 77 aa12.67□□□□□ -0.38
TSSC4-201ENST00000333256 AMMECR1LQ6DCA0 310 aa12.67□□□□□ -0.38
TSSC4-201ENST00000333256 KRTAP1-5Q9BYS1 174 aa12.67□□□□□ -0.38
TSSC4-201ENST00000333256 C2orf66Q6UXQ4 117 aa12.67□□□□□ -0.38
TSSC4-201ENST00000333256 KMT2AQ03164 3969 aa12.66□□□□□ -0.38
TSSC4-201ENST00000333256 SERF1AO75920 110 aa12.66□□□□□ -0.38
TSSC4-201ENST00000333256 LINC00310P59036 64 aa12.66□□□□□ -0.38
TSSC4-201ENST00000333256 RAB5BP61020 215 aa12.66□□□□□ -0.38
TSSC4-201ENST00000333256 SACSQ9NZJ4 4579 aa12.66□□□□□ -0.38
TSSC4-201ENST00000333256 NBDYA0A0U1RRE5 68 aa12.65□□□□□ -0.38
TSSC4-201ENST00000333256 H7C423 109 aa12.65□□□□□ -0.38
TSSC4-201ENST00000333256 KLK12Q9UKR0 248 aa12.65□□□□□ -0.38
TSSC4-201ENST00000333256 UBE2D4Q9Y2X8 147 aa12.65□□□□□ -0.38
TSSC4-201ENST00000333256 NUPR1O60356 82 aa12.64□□□□□ -0.39
TSSC4-201ENST00000333256 ANGP03950 147 aaKnown RBP12.64□□□□□ -0.39
TSSC4-201ENST00000333256 TMEM18Q96B42 140 aa12.64□□□□□ -0.39
TSSC4-201ENST00000333256 CYSLTR1Q9Y271 337 aa12.64□□□□□ -0.39
TSSC4-201ENST00000333256 PKIAP61925 76 aa12.64□□□□□ -0.39
TSSC4-201ENST00000333256 CLPSL2Q6UWE3 100 aa12.64□□□□□ -0.39
TSSC4-201ENST00000333256 A0A096LNJ9 63 aa12.63□□□□□ -0.39
TSSC4-201ENST00000333256 A0A1B0GUV1 79 aa12.63□□□□□ -0.39
TSSC4-201ENST00000333256 MRPL52Q86TS9 123 aaKnown RBP12.63□□□□□ -0.39
TSSC4-201ENST00000333256 CHCHD1Q96BP2 118 aaKnown RBP12.63□□□□□ -0.39
TSSC4-201ENST00000333256 OPRPNQ99935 248 aaPredicted RBP12.63□□□□□ -0.39
TSSC4-201ENST00000333256 HSBP1O75506 76 aa12.62□□□□□ -0.39
TSSC4-201ENST00000333256 RNASE13Q5GAN3 156 aaKnown RBP12.62□□□□□ -0.39
TSSC4-201ENST00000333256 DGAT2L7PQ6IED9 249 aa12.62□□□□□ -0.39
TSSC4-201ENST00000333256 FAM19A2Q8N3H0 131 aa12.62□□□□□ -0.39
TSSC4-201ENST00000333256 OR5A1Q8NGJ0 315 aa12.62□□□□□ -0.39
TSSC4-201ENST00000333256 TMEM101Q96IK0 257 aa12.62□□□□□ -0.39
TSSC4-201ENST00000333256 TRAV9-2A0A087WT02 112 aa12.61□□□□□ -0.39
TSSC4-201ENST00000333256 NDUFA6P56556 154 aa12.61□□□□□ -0.39
TSSC4-201ENST00000333256 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
TSSC4-201ENST00000333256 TOMM6Q96B49 74 aa12.61□□□□□ -0.39
TSSC4-201ENST00000333256 ZNF25P17030 456 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms