RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 MALP21145 153 aa6.19□□□□□ -1.42
SKA2-201ENST00000330137 ATP5EP2Q5VTU8 51 aa6.19□□□□□ -1.42
SKA2-201ENST00000330137 C22orf34Q6ZV56 151 aa6.19□□□□□ -1.42
SKA2-201ENST00000330137 FAM223AQ8IWN6 122 aa6.19□□□□□ -1.42
SKA2-201ENST00000330137 OBSCN-AS1Q96MR7 158 aa6.19□□□□□ -1.42
SKA2-201ENST00000330137 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
SKA2-201ENST00000330137 IGLV5-45A0A087WSX0 123 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 IGFL3Q6UXB1 125 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 Q8N9W7 124 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 TRAV41A0A0B4J266 112 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 S100A7L2Q5SY68 101 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 F8WDY8 70 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 NDUFA4O00483 81 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 SPRY2O43597 315 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 IGF1P05019 195 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 CLEC19AQ6UXS0 136 aa6.18□□□□□ -1.42
SKA2-201ENST00000330137 ATRXP46100 2492 aa6.17□□□□□ -1.42
SKA2-201ENST00000330137 IGHV3-64A0A075B6Q5 118 aa6.17□□□□□ -1.42
SKA2-201ENST00000330137 CD28P10747 220 aa6.17□□□□□ -1.42
SKA2-201ENST00000330137 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
SKA2-201ENST00000330137 C22orf24Q9Y442 160 aa6.17□□□□□ -1.42
SKA2-201ENST00000330137 RPL11P62913 178 aaKnown RBP6.17□□□□□ -1.42
SKA2-201ENST00000330137 ZNF843Q8N446 348 aa6.17□□□□□ -1.42
SKA2-201ENST00000330137 JPT2Q9H910 190 aa6.17□□□□□ -1.42
SKA2-201ENST00000330137 ABCA1O95477 2261 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 ZGRF1Q86YA3 2104 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 IGHV3-66A0A0C4DH42 116 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 DNAL4O96015 105 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 RPL28P46779 137 aaKnown RBP6.16□□□□□ -1.42
SKA2-201ENST00000330137 PIK3CD-AS1Q5SR53 167 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 FAM19A3Q7Z5A8 133 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 PRIMA1Q86XR5 153 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 OPRPNQ99935 248 aaPredicted RBP6.16□□□□□ -1.42
SKA2-201ENST00000330137 KALRNO60229 2985 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 IGHV3OR16-8A0A075B7F1 116 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 TRBV10-3A0A0K0K1G6 114 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 SYNJ2BPP57105 145 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 HIST2H2BCQ6DN03 193 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 HIST2H2BDQ6DRA6 164 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 RNF152Q8N8N0 203 aa6.16□□□□□ -1.42
SKA2-201ENST00000330137 TRAV13-2A0A0B4J235 113 aa6.15□□□□□ -1.42
SKA2-201ENST00000330137 IGHV3-16A0A0C4DH30 117 aa6.15□□□□□ -1.42
SKA2-201ENST00000330137 IGHV3-35A0A0C4DH35 117 aa6.15□□□□□ -1.42
SKA2-201ENST00000330137 USP17L23D6RBM5 183 aa6.15□□□□□ -1.42
SKA2-201ENST00000330137 NPC2P61916 151 aa6.15□□□□□ -1.42
SKA2-201ENST00000330137 KLRB1Q12918 225 aa6.15□□□□□ -1.42
SKA2-201ENST00000330137 C4orf26Q17RF5 130 aa6.15□□□□□ -1.42
SKA2-201ENST00000330137 FAM104AQ969W3 186 aa6.15□□□□□ -1.42
SKA2-201ENST00000330137 CADP27708 2225 aa6.15□□□□□ -1.43
SKA2-201ENST00000330137 A0A087WWL8 130 aa6.15□□□□□ -1.43
SKA2-201ENST00000330137 E7EQL1 145 aa6.15□□□□□ -1.43
SKA2-201ENST00000330137 ZNF580Q9UK33 172 aa6.15□□□□□ -1.43
SKA2-201ENST00000330137 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
SKA2-201ENST00000330137 H0YGX0 51 aa6.14□□□□□ -1.43
SKA2-201ENST00000330137 OXTP01178 125 aa6.14□□□□□ -1.43
SKA2-201ENST00000330137 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
SKA2-201ENST00000330137 TRAV12-2A0A075B6T6 113 aa6.14□□□□□ -1.43
SKA2-201ENST00000330137 Q6ZSV7 163 aa6.14□□□□□ -1.43
SKA2-201ENST00000330137 MUC4Q99102 2169 aa6.14□□□□□ -1.43
SKA2-201ENST00000330137 ADARB2-AS1A8MUL3 147 aa6.13□□□□□ -1.43
SKA2-201ENST00000330137 H3BUA1 57 aa6.13□□□□□ -1.43
SKA2-201ENST00000330137 ATP6V0E1O15342 81 aa6.13□□□□□ -1.43
SKA2-201ENST00000330137 HRCT1Q6UXD1 115 aa6.13□□□□□ -1.43
SKA2-201ENST00000330137 UBE2D4Q9Y2X8 147 aa6.13□□□□□ -1.43
SKA2-201ENST00000330137 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
SKA2-201ENST00000330137 BSNQ9UPA5 3926 aa6.13□□□□□ -1.43
SKA2-201ENST00000330137 PRRC2AP48634 2157 aaKnown RBP6.12□□□□□ -1.43
SKA2-201ENST00000330137 IGHG2P01859 326 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 ECSCRQ19T08 205 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 C19orf54Q5BKX5 351 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 DSCR8Q96T75 97 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 COL6A6A6NMZ7 2263 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 SPTA1P02549 2419 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 IGHV3OR16-13A0A075B7E8 117 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 IGHV3-74A0A0B4J1X5 117 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 PRB3Q04118 309 aaPredicted RBP6.12□□□□□ -1.43
SKA2-201ENST00000330137 LYPD5Q6UWN5 251 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 USMG5Q96IX5 58 aa6.12□□□□□ -1.43
SKA2-201ENST00000330137 TLN1Q9Y490 2541 aaKnown RBP6.11□□□□□ -1.43
SKA2-201ENST00000330137 PLCE1Q9P212 2302 aa6.11□□□□□ -1.43
SKA2-201ENST00000330137 SPENQ96T58 3664 aaKnown RBP6.11□□□□□ -1.43
SKA2-201ENST00000330137 J3QKU1 62 aa6.11□□□□□ -1.43
SKA2-201ENST00000330137 PLA2G2AP14555 144 aa6.11□□□□□ -1.43
SKA2-201ENST00000330137 FAM74A4Q5TZK3 123 aa6.11□□□□□ -1.43
SKA2-201ENST00000330137 PFN2P35080 140 aa6.11□□□□□ -1.43
SKA2-201ENST00000330137 Q8N2B8 174 aa6.11□□□□□ -1.43
SKA2-201ENST00000330137 ARHGAP32A7KAX9 2087 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 IGHV1OR15-1A0A075B7D0 117 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 IGHV3-49A0A0A0MS15 119 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 FAM236DA0A1B0GTK5 79 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 K7EMT4 169 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 FAM236CP0DP71 79 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 ZNF462Q96JM2 2506 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 TRAV12-3A0A0B4J271 114 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 CHCHD7Q9BUK0 85 aa6.1□□□□□ -1.43
SKA2-201ENST00000330137 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.43
SKA2-201ENST00000330137 CFAP46Q8IYW2 2715 aa6.09□□□□□ -1.43
SKA2-201ENST00000330137 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
SKA2-201ENST00000330137 PRRC2CQ9Y520 2896 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms