RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 FHL3Q13643 280 aa12.81□□□□□ -0.36
PTP4A3-201ENST00000329397 K7EQG2 157 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 EIF4EBP3O60516 100 aaPredicted RBP12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 FOXI1Q12951 378 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 SLC25A29Q8N8R3 303 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 SYT8Q8NBV8 401 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 UBE2D3P61077 147 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 UBE2D2P62837 147 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 PAPPA-AS1Q5QFB9 102 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 C18orf65Q6ZTR6 163 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 CDIP1Q9H305 208 aa12.8□□□□□ -0.36
PTP4A3-201ENST00000329397 NF1P21359 2839 aa12.79□□□□□ -0.36
PTP4A3-201ENST00000329397 ZNF469Q96JG9 3925 aaPredicted RBP12.79□□□□□ -0.36
PTP4A3-201ENST00000329397 TRBV6-5A0A0K0K1A5 114 aa12.79□□□□□ -0.36
PTP4A3-201ENST00000329397 B4DSR2 109 aa12.79□□□□□ -0.36
PTP4A3-201ENST00000329397 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
PTP4A3-201ENST00000329397 XGP55808 180 aa12.78□□□□□ -0.36
PTP4A3-201ENST00000329397 DUX3Q96PT4 197 aa12.78□□□□□ -0.36
PTP4A3-201ENST00000329397 AKAP9Q99996 3911 aa12.78□□□□□ -0.36
PTP4A3-201ENST00000329397 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
PTP4A3-201ENST00000329397 ZNF22P17026 224 aaPredicted RBP12.77□□□□□ -0.36
PTP4A3-201ENST00000329397 C20orf203Q8NBC4 194 aa12.77□□□□□ -0.36
PTP4A3-201ENST00000329397 HOXD3P31249 432 aaPredicted RBP12.77□□□□□ -0.37
PTP4A3-201ENST00000329397 MRPL23Q16540 153 aaKnown RBP12.77□□□□□ -0.37
PTP4A3-201ENST00000329397 Q6ZUT4 128 aa12.77□□□□□ -0.37
PTP4A3-201ENST00000329397 TRPT1Q86TN4 253 aaKnown RBP12.77□□□□□ -0.37
PTP4A3-201ENST00000329397 JMJD1CQ15652 2540 aa12.76□□□□□ -0.37
PTP4A3-201ENST00000329397 ZNF462Q96JM2 2506 aa12.76□□□□□ -0.37
PTP4A3-201ENST00000329397 IGLV4-3A0A075B6K6 122 aa12.76□□□□□ -0.37
PTP4A3-201ENST00000329397 C10orf126Q8N4M7 172 aa12.76□□□□□ -0.37
PTP4A3-201ENST00000329397 NIPBLQ6KC79 2804 aaeCLIP12.76□□□□□ -0.37
PTP4A3-201ENST00000329397 TRAV8-3A0A0A6YYJ7 113 aa12.76□□□□□ -0.37
PTP4A3-201ENST00000329397 TMEM223A0PJW6 202 aa12.76□□□□□ -0.37
PTP4A3-201ENST00000329397 A8MZ25 164 aa12.75□□□□□ -0.37
PTP4A3-201ENST00000329397 NSUN5P1Q3KNT7 163 aa12.75□□□□□ -0.37
PTP4A3-201ENST00000329397 CARD19Q96LW7 228 aa12.75□□□□□ -0.37
PTP4A3-201ENST00000329397 RHODO00212 210 aa12.75□□□□□ -0.37
PTP4A3-201ENST00000329397 I3L3M4 83 aa12.75□□□□□ -0.37
PTP4A3-201ENST00000329397 SLURP1P55000 103 aa12.75□□□□□ -0.37
PTP4A3-201ENST00000329397 MUSTN1Q8IVN3 82 aa12.75□□□□□ -0.37
PTP4A3-201ENST00000329397 PRO1854Q9UHT4 67 aa12.75□□□□□ -0.37
PTP4A3-201ENST00000329397 NPC2P61916 151 aa12.74□□□□□ -0.37
PTP4A3-201ENST00000329397 BEX4Q9NWD9 120 aaPredicted RBP12.74□□□□□ -0.37
PTP4A3-201ENST00000329397 ELANEP08246 267 aa12.74□□□□□ -0.37
PTP4A3-201ENST00000329397 DEFB131AP59861 70 aa12.74□□□□□ -0.37
PTP4A3-201ENST00000329397 F5H768 121 aa12.73□□□□□ -0.37
PTP4A3-201ENST00000329397 CD28P10747 220 aa12.73□□□□□ -0.37
PTP4A3-201ENST00000329397 RHOHQ15669 191 aa12.73□□□□□ -0.37
PTP4A3-201ENST00000329397 Q6ZSN1 163 aa12.73□□□□□ -0.37
PTP4A3-201ENST00000329397 CCDC168Q8NDH2 2452 aa12.73□□□□□ -0.37
PTP4A3-201ENST00000329397 IGHV3-38A0A0C4DH36 116 aa12.72□□□□□ -0.37
PTP4A3-201ENST00000329397 TRBV20-1A0A075B6N2 111 aa12.72□□□□□ -0.37
PTP4A3-201ENST00000329397 LEPROTO15243 131 aa12.72□□□□□ -0.37
PTP4A3-201ENST00000329397 ZFAND6Q6FIF0 208 aa12.72□□□□□ -0.37
PTP4A3-201ENST00000329397 FAM104AQ969W3 186 aa12.72□□□□□ -0.37
PTP4A3-201ENST00000329397 ODF3Q96PU9 254 aa12.71□□□□□ -0.37
PTP4A3-201ENST00000329397 LOC107984640A0A0U1RRK4 108 aa12.71□□□□□ -0.38
PTP4A3-201ENST00000329397 ANKRD29Q8N6D5 301 aa12.71□□□□□ -0.38
PTP4A3-201ENST00000329397 RBMY1BA6NDE4 496 aaKnown RBP12.7□□□□□ -0.38
PTP4A3-201ENST00000329397 RBMY1EA6NEQ0 496 aaKnown RBP12.7□□□□□ -0.38
PTP4A3-201ENST00000329397 RBMY1DP0C7P1 496 aaKnown RBP12.7□□□□□ -0.38
PTP4A3-201ENST00000329397 Q1RN00 199 aa12.7□□□□□ -0.38
PTP4A3-201ENST00000329397 C9JAW5 83 aa12.7□□□□□ -0.38
PTP4A3-201ENST00000329397 IGHV3-30-3P0DP02 117 aa12.7□□□□□ -0.38
PTP4A3-201ENST00000329397 Q6ZSV7 163 aa12.7□□□□□ -0.38
PTP4A3-201ENST00000329397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 IGKV2-29A2NJV5 120 aaPredicted RBP12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 PRSS2P07478 247 aa12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 TEX29Q8N6K0 151 aa12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 IGHV3-33P01772 117 aa12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 TEN1Q86WV5 123 aa12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 A0A0J9YXY3 114 aa12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 KHDC1LQ5JSQ8 128 aa12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 C3orf56Q8N813 242 aa12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 TMEM263Q8WUH6 116 aaKnown RBP12.69□□□□□ -0.38
PTP4A3-201ENST00000329397 A8MWV9 139 aa12.68□□□□□ -0.38
PTP4A3-201ENST00000329397 TRGV11A0A075B6L2 103 aa12.68□□□□□ -0.38
PTP4A3-201ENST00000329397 USP24Q9UPU5 2620 aa12.67□□□□□ -0.38
PTP4A3-201ENST00000329397 PRB1P04280 392 aa12.67□□□□□ -0.38
PTP4A3-201ENST00000329397 LYRM7Q5U5X0 104 aa12.67□□□□□ -0.38
PTP4A3-201ENST00000329397 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
PTP4A3-201ENST00000329397 ZNF702PQ9H963 129 aa12.67□□□□□ -0.38
PTP4A3-201ENST00000329397 ADAMTSL4-AS1Q5T5F5 129 aa12.67□□□□□ -0.38
PTP4A3-201ENST00000329397 LINC01356Q8N9X3 169 aa12.67□□□□□ -0.38
PTP4A3-201ENST00000329397 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
PTP4A3-201ENST00000329397 ATP6V0E2Q8NHE4 81 aa12.66□□□□□ -0.38
PTP4A3-201ENST00000329397 PPDPFLQ8WWR9 84 aa12.66□□□□□ -0.38
PTP4A3-201ENST00000329397 SLC25A20O43772 301 aa12.65□□□□□ -0.38
PTP4A3-201ENST00000329397 NDUFV3P56181 108 aaKnown RBP12.65□□□□□ -0.38
PTP4A3-201ENST00000329397 MEIG1Q5JSS6 88 aa12.65□□□□□ -0.38
PTP4A3-201ENST00000329397 DAND5Q8N907 189 aa12.65□□□□□ -0.38
PTP4A3-201ENST00000329397 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
PTP4A3-201ENST00000329397 FAM19A5Q7Z5A7 132 aaPredicted RBP12.64□□□□□ -0.39
PTP4A3-201ENST00000329397 NBPF19A0A087WUL8 3843 aa12.64□□□□□ -0.39
PTP4A3-201ENST00000329397 H3BMM0 161 aa12.64□□□□□ -0.39
PTP4A3-201ENST00000329397 M0R2P5 195 aa12.64□□□□□ -0.39
PTP4A3-201ENST00000329397 LINC00694P0DN24 101 aa12.63□□□□□ -0.39
PTP4A3-201ENST00000329397 UBE2E2Q96LR5 201 aa12.63□□□□□ -0.39
PTP4A3-201ENST00000329397 LINC00467Q9BRT7 94 aa12.63□□□□□ -0.39
PTP4A3-201ENST00000329397 CR1P17927 2039 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms