RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 MRPS36P82909 103 aaKnown RBP14.55□□□□□ -0.08
SOX2-201ENST00000325404 RBMY1FQ15415 496 aaKnown RBP14.55□□□□□ -0.08
SOX2-201ENST00000325404 CFAP161Q6P656 301 aa14.55□□□□□ -0.08
SOX2-201ENST00000325404 LINC00467Q9BRT7 94 aa14.55□□□□□ -0.08
SOX2-201ENST00000325404 M0QXV9 152 aa14.54□□□□□ -0.08
SOX2-201ENST00000325404 MXRA5Q9NR99 2828 aa14.54□□□□□ -0.08
SOX2-201ENST00000325404 A0A0J9YXV3 536 aa14.54□□□□□ -0.08
SOX2-201ENST00000325404 H3BMM0 161 aa14.54□□□□□ -0.08
SOX2-201ENST00000325404 M0R2P5 195 aa14.54□□□□□ -0.08
SOX2-201ENST00000325404 TCL1BO95988 128 aa14.54□□□□□ -0.08
SOX2-201ENST00000325404 UNC79Q9P2D8 2635 aa14.54□□□□□ -0.08
SOX2-201ENST00000325404 FLNAP21333 2647 aaKnown RBP14.53□□□□□ -0.08
SOX2-201ENST00000325404 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.53□□□□□ -0.08
SOX2-201ENST00000325404 INSL3P51460 131 aa14.53□□□□□ -0.08
SOX2-201ENST00000325404 Q8N2B8 174 aa14.53□□□□□ -0.08
SOX2-201ENST00000325404 DUX5Q96PT3 197 aa14.53□□□□□ -0.08
SOX2-201ENST00000325404 A4D1N5 150 aa14.52□□□□□ -0.08
SOX2-201ENST00000325404 TEN1Q86WV5 123 aa14.52□□□□□ -0.08
SOX2-201ENST00000325404 TMEM263Q8WUH6 116 aaKnown RBP14.52□□□□□ -0.08
SOX2-201ENST00000325404 FAM104AQ969W3 186 aa14.52□□□□□ -0.08
SOX2-201ENST00000325404 PPDPFLQ8WWR9 84 aa14.52□□□□□ -0.09
SOX2-201ENST00000325404 TNFRSF18Q9Y5U5 241 aa14.52□□□□□ -0.09
SOX2-201ENST00000325404 KNCNA6PVL3 124 aa14.51□□□□□ -0.09
SOX2-201ENST00000325404 DEFB131AP59861 70 aa14.51□□□□□ -0.09
SOX2-201ENST00000325404 ZNF415Q09FC8 603 aa14.51□□□□□ -0.09
SOX2-201ENST00000325404 SPANXA1Q9NS26 97 aa14.51□□□□□ -0.09
SOX2-201ENST00000325404 IGHV3-33P01772 117 aa14.51□□□□□ -0.09
SOX2-201ENST00000325404 CD28P10747 220 aa14.51□□□□□ -0.09
SOX2-201ENST00000325404 PEMTQ9UBM1 199 aa14.51□□□□□ -0.09
SOX2-201ENST00000325404 PDZD2O15018 2839 aa14.51□□□□□ -0.09
SOX2-201ENST00000325404 ITPR2Q14571 2701 aa14.5□□□□□ -0.09
SOX2-201ENST00000325404 SMAGPQ0VAQ4 97 aa14.5□□□□□ -0.09
SOX2-201ENST00000325404 DNAJC30Q96LL9 226 aa14.5□□□□□ -0.09
SOX2-201ENST00000325404 A0A0J9YXY3 114 aa14.49□□□□□ -0.09
SOX2-201ENST00000325404 SONP18583 2426 aaKnown RBP14.49□□□□□ -0.09
SOX2-201ENST00000325404 IGHV3-30-3P0DP02 117 aa14.49□□□□□ -0.09
SOX2-201ENST00000325404 SFTA2Q6UW10 78 aa14.49□□□□□ -0.09
SOX2-201ENST00000325404 MUSTN1Q8IVN3 82 aa14.49□□□□□ -0.09
SOX2-201ENST00000325404 DUX3Q96PT4 197 aa14.49□□□□□ -0.09
SOX2-201ENST00000325404 TIMM21Q9BVV7 248 aa14.49□□□□□ -0.09
SOX2-201ENST00000325404 ERG28Q9UKR5 140 aa14.49□□□□□ -0.09
SOX2-201ENST00000325404 TINCRA0A1B0GVN0 87 aa14.48□□□□□ -0.09
SOX2-201ENST00000325404 RBMY1BA6NDE4 496 aaKnown RBP14.48□□□□□ -0.09
SOX2-201ENST00000325404 RBMY1EA6NEQ0 496 aaKnown RBP14.48□□□□□ -0.09
SOX2-201ENST00000325404 RBMY1DP0C7P1 496 aaKnown RBP14.48□□□□□ -0.09
SOX2-201ENST00000325404 SCGB1C2P0DMR2 95 aa14.48□□□□□ -0.09
SOX2-201ENST00000325404 TMEM86BQ8N661 226 aa14.48□□□□□ -0.09
SOX2-201ENST00000325404 ZNF418Q8TF45 676 aaPredicted RBP14.48□□□□□ -0.09
SOX2-201ENST00000325404 SPXQ9BT56 116 aa14.48□□□□□ -0.09
SOX2-201ENST00000325404 ZNF469Q96JG9 3925 aaPredicted RBP14.48□□□□□ -0.09
SOX2-201ENST00000325404 GCN1Q92616 2671 aaKnown RBP14.47□□□□□ -0.09
SOX2-201ENST00000325404 IGHV1-58A0A0C4DH39 117 aa14.47□□□□□ -0.09
SOX2-201ENST00000325404 SLURP1P55000 103 aa14.47□□□□□ -0.09
SOX2-201ENST00000325404 EIF4EBP3O60516 100 aaPredicted RBP14.47□□□□□ -0.09
SOX2-201ENST00000325404 BEAN1Q3B7T3 259 aa14.47□□□□□ -0.09
SOX2-201ENST00000325404 LINC01600Q96MT4 127 aa14.46□□□□□ -0.09
SOX2-201ENST00000325404 CHCHD7Q9BUK0 85 aa14.46□□□□□ -0.09
SOX2-201ENST00000325404 C4orf3Q8WVX3 66 aa14.46□□□□□ -0.1
SOX2-201ENST00000325404 IGHV3-53P01767 116 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 KRTAP1-1Q07627 177 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 RNF183Q96D59 192 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 CARD19Q96LW7 228 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 LITAFQ99732 161 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 SPANXDQ9BXN6 97 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 SPANXCQ9NY87 97 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 UBE2D4Q9Y2X8 147 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 PROK1P58294 105 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 CDIP1Q9H305 208 aa14.45□□□□□ -0.1
SOX2-201ENST00000325404 MYO9AB2RTY4 2548 aa14.44□□□□□ -0.1
SOX2-201ENST00000325404 IGHV3-73A0A0B4J1V6 119 aa14.44□□□□□ -0.1
SOX2-201ENST00000325404 C11orf72Q8NBR9 251 aa14.44□□□□□ -0.1
SOX2-201ENST00000325404 IGHV3-64A0A075B6Q5 118 aa14.44□□□□□ -0.1
SOX2-201ENST00000325404 TMEM61Q8N0U2 210 aa14.44□□□□□ -0.1
SOX2-201ENST00000325404 RAX2Q96IS3 184 aa14.44□□□□□ -0.1
SOX2-201ENST00000325404 YAE1D1Q9NRH1 226 aa14.44□□□□□ -0.1
SOX2-201ENST00000325404 HTN1P15515 57 aa14.43□□□□□ -0.1
SOX2-201ENST00000325404 MAP6D1Q9H9H5 199 aa14.43□□□□□ -0.1
SOX2-201ENST00000325404 VSIG2Q96IQ7 327 aa14.43□□□□□ -0.1
SOX2-201ENST00000325404 RS1O15537 224 aa14.42□□□□□ -0.1
SOX2-201ENST00000325404 TRBV30A0A0K0K1B3 111 aa14.42□□□□□ -0.1
SOX2-201ENST00000325404 Q6ZSN1 163 aa14.42□□□□□ -0.1
SOX2-201ENST00000325404 C18orf65Q6ZTR6 163 aa14.42□□□□□ -0.1
SOX2-201ENST00000325404 ACANP16112 2415 aa14.42□□□□□ -0.1
SOX2-201ENST00000325404 DEFB136Q30KP8 78 aa14.41□□□□□ -0.1
SOX2-201ENST00000325404 FASNP49327 2511 aaKnown RBP14.41□□□□□ -0.1
SOX2-201ENST00000325404 HECTD1Q9ULT8 2610 aa14.41□□□□□ -0.1
SOX2-201ENST00000325404 DNAJC9-AS1A6NH13 148 aa14.41□□□□□ -0.1
SOX2-201ENST00000325404 TIMM17BO60830 172 aa14.41□□□□□ -0.1
SOX2-201ENST00000325404 INSP01308 110 aa14.41□□□□□ -0.1
SOX2-201ENST00000325404 NDUFA12Q9UI09 145 aa14.41□□□□□ -0.1
SOX2-201ENST00000325404 SLC25A20O43772 301 aa14.4□□□□□ -0.1
SOX2-201ENST00000325404 LINC01587Q99440 93 aa14.4□□□□□ -0.1
SOX2-201ENST00000325404 TIRAPP58753 221 aa14.4□□□□□ -0.1
SOX2-201ENST00000325404 ATXN8Q156A1 80 aa14.4□□□□□ -0.1
SOX2-201ENST00000325404 DEFB114Q30KQ6 69 aa14.4□□□□□ -0.1
SOX2-201ENST00000325404 CEMP1Q6PRD7 247 aaPredicted RBP14.39□□□□□ -0.11
SOX2-201ENST00000325404 ANKRD29Q8N6D5 301 aa14.39□□□□□ -0.11
SOX2-201ENST00000325404 ZFAND6Q6FIF0 208 aa14.39□□□□□ -0.11
SOX2-201ENST00000325404 DYNLRB2Q8TF09 96 aa14.39□□□□□ -0.11
SOX2-201ENST00000325404 IGLV5-45A0A087WSX0 123 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms